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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr17 | 74203581 | 74203661 | TRUE | OK | 125.9 | 0.00331 | 0.01241 | 0.3175 | 0.348 | 0.174 | 119.0 | 110.0 | 90.0 | 133.0 | 161.0 | 144.0 |
E002 | chr17 | 74203661 | 74203674 | TRUE | OK | 216.8 | 0.0018 | 0.00106 | 0.08109 | 0.351 | 0.176 | 191.0 | 181.0 | 174.0 | 213.0 | 302.0 | 237.0 |
E003 | chr17 | 74203674 | 74203677 | TRUE | OK | 266.9 | 0.00158 | 0.001542 | 0.103 | 0.310 | 0.155 | 240.0 | 230.0 | 214.0 | 265.0 | 364.0 | 286.0 |
E004 | chr17 | 74203677 | 74203692 | TRUE | OK | 647.5 | 0.00129 | 0.0998 | 0.6349 | 0.118 | 0.059 | 642.0 | 634.0 | 517.0 | 635.0 | 828.0 | 636.0 |
E005 | chr17 | 74203692 | 74203693 | TRUE | OK | 713.5 | 0.00107 | 0.1649 | 0.7001 | 0.093 | 0.047 | 708.0 | 700.0 | 585.0 | 691.0 | 917.0 | 686.0 |
E006 | chr17 | 74203693 | 74203703 | TRUE | OK | 3310.4 | 0.00175 | 0.3138 | 0.7768 | -0.081 | -0.041 | 3630.0 | 3351.0 | 2854.0 | 3030.0 | 4009.0 | 3065.0 |
E007 | chr17 | 74203703 | 74203710 | TRUE | OK | 7329.7 | 0.00287 | 0.1214 | 0.6615 | -0.156 | -0.078 | 8008.0 | 7629.0 | 6436.0 | 6732.0 | 8586.0 | 6756.0 |
E008 | chr17 | 74203710 | 74203745 | TRUE | OK | 13662.3 | 0.00355 | 0.5356 | 0.8606 | -0.080 | -0.040 | 14519.0 | 14001.0 | 11555.0 | 12543.0 | 16726.0 | 12893.0 |
E009 | chr17 | 74203745 | 74203770 | TRUE | OK | 134.2 | 0.00835 | 0.9995 | 1 | 0.011 | 0.006 | 159.0 | 140.0 | 91.0 | 106.0 | 190.0 | 125.0 |
E010 | chr17 | 74203770 | 74203917 | TRUE | OK | 832.1 | 0.00112 | 5.915e-06 | 0.001605 | 0.320 | 0.160 | 740.0 | 752.0 | 638.0 | 768.0 | 1200.0 | 886.0 |
E011 | chr17 | 74203917 | 74203958 | TRUE | OK | 19780.0 | 0.0103 | 0.4885 | 0.8433 | -0.151 | -0.075 | 20976.0 | 20294.0 | 16682.0 | 18064.0 | 24354.0 | 18682.0 |
E012 | chr17 | 74203958 | 74204129 | TRUE | OK | 175.7 | 0.00991 | 2.394e-26 | 1.462e-22 | 2.126 | 1.063 | 74.0 | 64.0 | 47.0 | 303.0 | 323.0 | 236.0 |
E013 | chr17 | 74204129 | 74204190 | TRUE | OK | 23506.0 | 0.0194 | 0.3704 | 0.7988 | -0.258 | -0.126 | 24431.0 | 23960.0 | 20038.0 | 21220.0 | 29632.0 | 22065.0 |
E014 | chr17 | 74204190 | 74204593 | TRUE | OK | 22.5 | 0.0313 | 0.3297 | 0.7832 | 0.356 | 0.178 | 22.0 | 18.0 | 17.0 | 32.0 | 19.0 | 28.0 |
E015 | chr17 | 74204593 | 74206283 | TRUE | OK | 66.2 | 0.0479 | 0.2115 | 0.7302 | 0.493 | 0.247 | 55.0 | 52.0 | 50.0 | 96.0 | 52.0 | 93.0 |
E016 | chr17 | 74209186 | 74209309 | TRUE | OK | 24474.1 | 0.0052 | 0.01187 | 0.3108 | -0.306 | -0.146 | 25103.0 | 24835.0 | 21037.0 | 21786.0 | 31503.0 | 22801.0 |
E017 | chr17 | 74209309 | 74209461 | TRUE | OK | 587.2 | 0.0245 | 0.5703 | 0.8734 | 0.190 | 0.095 | 407.0 | 615.0 | 531.0 | 401.0 | 957.0 | 575.0 |
E018 | chr17 | 74209803 | 74209812 | TRUE | OK | 9190.6 | 0.00403 | 0.3894 | 0.8057 | -0.070 | -0.035 | 9995.0 | 8970.0 | 8065.0 | 7984.0 | 12274.0 | 7982.0 |
E019 | chr17 | 74209812 | 74209878 | TRUE | OK | 8657.1 | 0.00368 | 0.3424 | 0.7879 | -0.075 | -0.038 | 9328.0 | 8487.0 | 7669.0 | 7479.0 | 11583.0 | 7494.0 |
E020 | chr17 | 74209878 | 74209880 | TRUE | OK | 100.1 | 0.0112 | 0.8132 | 0.9514 | 0.057 | 0.028 | 89.0 | 85.0 | 106.0 | 97.0 | 141.0 | 79.0 |
E021 | chr17 | 74209880 | 74209896 | TRUE | OK | 23.8 | 0.00727 | 0.09151 | 0.6233 | 0.483 | 0.242 | 23.0 | 18.0 | 16.0 | 27.0 | 38.0 | 21.0 |
E022 | chr17 | 74209896 | 74210655 | TRUE | OK | 75.9 | 0.00607 | 0.6083 | 0.8864 | 0.089 | 0.045 | 92.0 | 65.0 | 57.0 | 76.0 | 96.0 | 73.0 |
J023 | chr17 | 74203710 | 74203917 | TRUE | OK | 1764.4 | 0.00109 | 0.03025 | 0.4538 | -0.143 | -0.071 | 1935.0 | 1835.0 | 1580.0 | 1584.0 | 2078.0 | 1612.0 |
J024 | chr17 | 74203745 | 74203917 | TRUE | OK | 13610.1 | 0.00329 | 0.5174 | 0.8541 | -0.080 | -0.040 | 14450.0 | 13955.0 | 11520.0 | 12493.0 | 16655.0 | 12847.0 |
J025 | chr17 | 74203770 | 74203917 | TRUE | OK | 44.9 | 0.00353 | 0.09941 | 0.6343 | -0.327 | -0.164 | 48.0 | 55.0 | 42.0 | 29.0 | 58.0 | 38.0 |
J026 | chr17 | 74203958 | 74204129 | TRUE | OK | 19748.4 | 0.0104 | 0.482 | 0.8412 | -0.153 | -0.076 | 20945.0 | 20259.0 | 16667.0 | 18028.0 | 24305.0 | 18657.0 |
J027 | chr17 | 74204190 | 74209186 | TRUE | OK | 22438.9 | 0.0107 | 0.1553 | 0.6928 | -0.275 | -0.136 | 23488.0 | 22918.0 | 19227.0 | 20214.0 | 28158.0 | 20945.0 |
J028 | chr17 | 74209309 | 74209803 | TRUE | OK | 9177.1 | 0.00387 | 0.3654 | 0.797 | -0.073 | -0.036 | 9987.0 | 8963.0 | 8057.0 | 7960.0 | 12257.0 | 7965.0 |
J029 | chr17 | 74209309 | 74209812 | TRUE | OK | 4.9 | 0.0374 | 0.5698 | 0.8732 | 0.388 | 0.194 | 4.0 | 2.0 | 6.0 | 2.0 | 9.0 | 6.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000172809.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |