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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Relative Coverage | |
control | mutant | ||||||||||||
E001 | chr19 | 54200808 | 54200857 | TRUE | OK | 28.6 | 0.00797 | 0.6077 | 0.8862 | 0.116 | 0.058 | 27.4 | 29.7 |
E002 | chr19 | 54200857 | 54200870 | TRUE | OK | 227.1 | 0.00908 | 0.6526 | 0.9017 | -0.114 | -0.057 | 236.7 | 218.8 |
E003 | chr19 | 54200870 | 54200871 | TRUE | OK | 238.2 | 0.0106 | 0.5581 | 0.8688 | -0.148 | -0.074 | 251.3 | 226.7 |
E004 | chr19 | 54200871 | 54200873 | TRUE | OK | 1057.9 | 0.00406 | 0.7246 | 0.9251 | -0.061 | -0.031 | 1080.4 | 1035.5 |
E005 | chr19 | 54200873 | 54200878 | TRUE | OK | 4101.0 | 0.00324 | 0.05735 | 0.5529 | -0.203 | -0.101 | 4399.8 | 3822.5 |
E006 | chr19 | 54200878 | 54200888 | TRUE | OK | 9640.0 | 0.00238 | 0.05381 | 0.5439 | -0.176 | -0.088 | 10246.4 | 9069.3 |
E007 | chr19 | 54200888 | 54200893 | TRUE | OK | 629.8 | 0.00125 | 0.0002641 | 0.03181 | -0.286 | -0.143 | 695.1 | 570.3 |
E008 | chr19 | 54200893 | 54200961 | TRUE | OK | 252.5 | 0.00794 | 0.5409 | 0.8625 | 0.076 | 0.038 | 245.1 | 258.3 |
E009 | chr19 | 54201132 | 54201159 | TRUE | OK | 284.6 | 0.0029 | 0.01968 | 0.385 | 0.251 | 0.126 | 257.8 | 306.9 |
E010 | chr19 | 54201159 | 54201281 | TRUE | OK | 26163.4 | 0.00308 | 0.2758 | 0.7609 | -0.122 | -0.061 | 27281.2 | 25064.1 |
E011 | chr19 | 54201486 | 54201609 | TRUE | OK | 39467.3 | 0.0016 | 0.9784 | 0.9956 | -0.007 | -0.004 | 39502.7 | 39308.7 |
E012 | chr19 | 54201609 | 54202008 | TRUE | OK | 334.7 | 0.0193 | 0.3237 | 0.781 | 0.204 | 0.102 | 309.6 | 356.6 |
E013 | chr19 | 54206275 | 54206462 | TRUE | OK | 37251.9 | 0.00492 | 0.1725 | 0.7052 | 0.169 | 0.084 | 35022.7 | 39380.0 |
E014 | chr19 | 54206462 | 54206552 | TRUE | OK | 436.3 | 0.00129 | 0.0008337 | 0.06944 | 0.265 | 0.133 | 393.4 | 472.8 |
E015 | chr19 | 54206552 | 54206565 | TRUE | OK | 330.6 | 0.0178 | 0.8025 | 0.9483 | -0.087 | -0.044 | 341.0 | 321.0 |
E016 | chr19 | 54206565 | 54206724 | TRUE | OK | 553.0 | 0.00805 | 0.9273 | 0.983 | -0.014 | -0.007 | 555.3 | 550.1 |
E017 | chr19 | 54206724 | 54206847 | TRUE | OK | 208.6 | 0.0156 | 0.3611 | 0.7955 | 0.158 | 0.079 | 196.7 | 219.5 |
E018 | chr19 | 54206847 | 54207397 | TRUE | OK | 838.8 | 0.00284 | 1.414e-18 | 4.858e-15 | 0.856 | 0.428 | 587.7 | 1063.8 |
E019 | chr19 | 54207397 | 54207522 | TRUE | OK | 24433.2 | 0.0033 | 0.8565 | 0.9639 | -0.007 | -0.004 | 24459.2 | 24332.8 |
E020 | chr19 | 54207522 | 54207630 | TRUE | OK | 8272.5 | 0.0028 | 0.1416 | 0.6806 | -0.122 | -0.061 | 8627.1 | 7928.9 |
E021 | chr19 | 54207630 | 54207644 | TRUE | OK | 416.9 | 0.0165 | 0.1145 | 0.6538 | 0.396 | 0.198 | 357.0 | 469.7 |
E022 | chr19 | 54207644 | 54207647 | TRUE | OK | 32.8 | 0.016 | 0.1773 | 0.7086 | -0.351 | -0.176 | 36.8 | 28.9 |
E023 | chr19 | 54231740 | 54231936 | TRUE | OK | 17.1 | 0.0178 | 0.1051 | 0.6419 | 0.584 | 0.292 | 13.4 | 20.1 |
E024 | chr19 | 54247091 | 54249003 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.236 | 0.6326 | NA | NA | NA | NA | NA |
J025 | chr19 | 54200888 | 54201159 | TRUE | OK | 9019.4 | 0.00223 | 0.0711 | 0.5849 | -0.162 | -0.081 | 9538.3 | 8527.9 |
J026 | chr19 | 54200893 | 54201159 | TRUE | OK | 536.6 | 0.000806 | 2.546e-05 | 0.005187 | -0.301 | -0.150 | 595.1 | 483.2 |
J027 | chr19 | 54200961 | 54201159 | TRUE | OK | 241.1 | 0.007 | 0.6416 | 0.8983 | 0.049 | 0.024 | 236.4 | 244.5 |
J028 | chr19 | 54201281 | 54201486 | TRUE | OK | 25477.9 | 0.00282 | 0.2424 | 0.7462 | -0.124 | -0.062 | 26584.6 | 24392.2 |
J029 | chr19 | 54201609 | 54206275 | TRUE | OK | 19357.0 | 0.00378 | 0.08549 | 0.613 | 0.183 | 0.091 | 18080.7 | 20521.1 |
J030 | chr19 | 54201609 | 54207397 | TRUE | OK | 163.7 | 0.00127 | 0.8624 | 0.9656 | 0.013 | 0.007 | 162.5 | 164.0 |
J031 | chr19 | 54201609 | 54231740 | TRUE | OK | 16.8 | 0.0126 | 0.08107 | 0.6045 | 0.600 | 0.300 | 13.1 | 19.8 |
J032 | chr19 | 54206462 | 54206552 | TRUE | OK | 195.4 | 0.0132 | 0.2602 | 0.7535 | -0.259 | -0.129 | 213.9 | 178.8 |
J033 | chr19 | 54206462 | 54207397 | TRUE | OK | 21941.2 | 0.0028 | 0.4358 | 0.8243 | -0.065 | -0.032 | 22420.8 | 21432.8 |
J034 | chr19 | 54206724 | 54207397 | TRUE | OK | 200.3 | 0.00427 | 0.9695 | 0.9935 | 0.007 | 0.003 | 199.1 | 200.1 |
J035 | chr19 | 54231936 | 54247091 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
N036 | chr19 | 54200888 | 54201165 | TRUE | OK | 13.0 | 0.00835 | 0.3437 | 0.7887 | -0.357 | -0.179 | 14.7 | 11.5 |
N037 | chr19 | 54201281 | 54206275 | TRUE | OK | 76.9 | 0.0057 | 0.7459 | 0.9315 | 0.045 | 0.022 | 75.3 | 77.7 |
N038 | chr19 | 54206462 | 54207370 | TRUE | OK | 14.9 | 0.0122 | 0.2819 | 0.7634 | -0.382 | -0.191 | 17.1 | 13.1 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000170889.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |