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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr1 | 156282934 | 156282947 | TRUE | OK | 9.3 | 0.0151 | 0.005059 | 0.2037 | 1.227 | 0.614 | 12.0 | 6.0 | 8.0 | 10.0 | 12.0 | 8.0 |
E002 | chr1 | 156282947 | 156282952 | TRUE | OK | 9.1 | 0.0143 | 0.01455 | 0.3405 | 1.072 | 0.536 | 12.0 | 7.0 | 8.0 | 10.0 | 10.0 | 8.0 |
E003 | chr1 | 156282952 | 156283065 | TRUE | OK | 44.3 | 0.011 | 0.0002524 | 0.03087 | 0.917 | 0.458 | 59.0 | 41.0 | 40.0 | 40.0 | 34.0 | 55.0 |
E004 | chr1 | 156284313 | 156284321 | TRUE | OK | 37.9 | 0.0049 | 0.01941 | 0.383 | -0.573 | -0.287 | 65.0 | 56.0 | 52.0 | 24.0 | 16.0 | 18.0 |
E005 | chr1 | 156284321 | 156284324 | TRUE | OK | 45.9 | 0.00424 | 0.0008977 | 0.07298 | -0.757 | -0.378 | 80.0 | 69.0 | 67.0 | 25.0 | 19.0 | 20.0 |
E006 | chr1 | 156284324 | 156284406 | TRUE | OK | 143.0 | 0.00375 | 7.4e-11 | 7.974e-08 | -1.028 | -0.514 | 247.0 | 235.0 | 213.0 | 60.0 | 52.0 | 64.0 |
E007 | chr1 | 156285183 | 156285267 | TRUE | OK | 271.7 | 0.00661 | 0.02629 | 0.4311 | -0.351 | -0.176 | 445.0 | 392.0 | 346.0 | 162.0 | 131.0 | 180.0 |
E008 | chr1 | 156285267 | 156285524 | TRUE | OK | 432.6 | 0.00639 | 0.03099 | 0.4575 | -0.321 | -0.160 | 712.0 | 619.0 | 536.0 | 294.0 | 217.0 | 261.0 |
E009 | chr1 | 156285524 | 156285983 | TRUE | OK | 587.3 | 0.00158 | 2.127e-08 | 1.253e-05 | -0.506 | -0.253 | 993.0 | 812.0 | 788.0 | 359.0 | 319.0 | 308.0 |
E010 | chr1 | 156285983 | 156286259 | TRUE | OK | 76.8 | 0.00311 | 0.2948 | 0.7692 | 0.176 | 0.088 | 122.0 | 87.0 | 91.0 | 53.0 | 59.0 | 55.0 |
E011 | chr1 | 156286259 | 156286275 | TRUE | OK | 233.2 | 0.002 | 0.00681 | 0.2379 | -0.314 | -0.157 | 403.0 | 303.0 | 305.0 | 129.0 | 146.0 | 136.0 |
E012 | chr1 | 156286275 | 156286473 | TRUE | OK | 478.9 | 0.00228 | 0.05154 | 0.5376 | -0.203 | -0.101 | 840.0 | 615.0 | 576.0 | 302.0 | 305.0 | 289.0 |
E013 | chr1 | 156291384 | 156291525 | TRUE | OK | 426.4 | 0.00481 | 0.6189 | 0.89 | -0.073 | -0.037 | 769.0 | 522.0 | 484.0 | 294.0 | 277.0 | 266.0 |
E014 | chr1 | 156291525 | 156291702 | TRUE | OK | 442.6 | 0.0029 | 0.1627 | 0.6981 | -0.159 | -0.079 | 776.0 | 555.0 | 533.0 | 298.0 | 284.0 | 259.0 |
E015 | chr1 | 156291702 | 156291948 | TRUE | OK | 516.2 | 0.00658 | 0.547 | 0.8646 | -0.086 | -0.043 | 891.0 | 639.0 | 614.0 | 320.0 | 384.0 | 303.0 |
E016 | chr1 | 156291948 | 156292443 | TRUE | OK | 486.0 | 0.00262 | 0.3321 | 0.7842 | -0.101 | -0.051 | 790.0 | 654.0 | 574.0 | 298.0 | 347.0 | 298.0 |
E017 | chr1 | 156292726 | 156293185 | TRUE | OK | 300.1 | 0.00139 | 9.513e-40 | 1.195e-35 | 1.270 | 0.635 | 352.0 | 268.0 | 263.0 | 324.0 | 310.0 | 296.0 |
J018 | chr1 | 156283065 | 156285183 | TRUE | OK | 39.3 | 0.0114 | 0.0003345 | 0.0376 | 0.934 | 0.467 | 51.0 | 34.0 | 38.0 | 37.0 | 29.0 | 49.0 |
J019 | chr1 | 156284406 | 156285183 | TRUE | OK | 140.8 | 0.0034 | 2.063e-11 | 2.478e-08 | -1.042 | -0.521 | 243.0 | 234.0 | 209.0 | 58.0 | 51.0 | 63.0 |
J020 | chr1 | 156285267 | 156285524 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.4 | 0.0898 | 0.973 | NA | NA | NA | 3.0 | 3.0 | 0.0 | 2.0 | 0.0 | 1.0 |
J021 | chr1 | 156285267 | 156286259 | TRUE | OK | 4.6 | 0.124 | 0.9898 | 0.9982 | -0.068 | -0.034 | 4.0 | 12.0 | 3.0 | 1.0 | 4.0 | 4.0 |
J022 | chr1 | 156285983 | 156286259 | TRUE | OK | 171.0 | 0.00182 | 0.0008145 | 0.06835 | -0.419 | -0.210 | 304.0 | 222.0 | 231.0 | 94.0 | 105.0 | 87.0 |
J023 | chr1 | 156286473 | 156291384 | TRUE | OK | 243.0 | 0.00372 | 0.6586 | 0.904 | -0.066 | -0.033 | 437.0 | 300.0 | 274.0 | 162.0 | 155.0 | 161.0 |
J024 | chr1 | 156291702 | 156292726 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0727 | 0.7997 | NA | NA | NA | 3.0 | 1.0 | 1.0 | 1.0 | 0.0 | 2.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000163472.19 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |