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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr4 | 122826707 | 122826775 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.6 | 0.201 | 1 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 2.0 |
E002 | chr4 | 122826775 | 122826830 | TRUE | OK | 6.0 | 0.0215 | 0.6757 | 0.9096 | -0.247 | -0.123 | 4.0 | 2.0 | 4.0 | 10.0 | 8.0 | 8.0 |
E003 | chr4 | 122826830 | 122827352 | TRUE | OK | 69.0 | 0.00497 | 0.00118 | 0.08692 | 0.728 | 0.364 | 19.0 | 24.0 | 26.0 | 120.0 | 97.0 | 124.0 |
E004 | chr4 | 122876320 | 122876424 | TRUE | OK | 76.0 | 0.00324 | 9.086e-06 | 0.002252 | 0.923 | 0.461 | 25.0 | 28.0 | 16.0 | 133.0 | 117.0 | 134.0 |
E005 | chr4 | 122892210 | 122892396 | TRUE | OK | 93.7 | 0.00387 | 0.003639 | 0.1697 | 0.551 | 0.276 | 45.0 | 37.0 | 23.0 | 151.0 | 150.0 | 154.0 |
E006 | chr4 | 122892396 | 122895464 | TRUE | OK | 552.7 | 0.00929 | 8.289e-09 | 5.43e-06 | -1.097 | -0.546 | 373.0 | 337.0 | 263.0 | 879.0 | 656.0 | 810.0 |
E007 | chr4 | 122895464 | 122898236 | TRUE | OK | 337.0 | 0.00671 | 0.2918 | 0.7677 | -0.178 | -0.089 | 189.0 | 184.0 | 149.0 | 507.0 | 511.0 | 473.0 |
J008 | chr4 | 122827352 | 122876320 | TRUE | OK | 35.4 | 0.0055 | 0.08238 | 0.6071 | 0.490 | 0.245 | 12.0 | 16.0 | 12.0 | 59.0 | 45.0 | 67.0 |
J009 | chr4 | 122876424 | 122892210 | TRUE | OK | 59.5 | 0.00321 | 1.067e-05 | 0.002575 | 1.013 | 0.506 | 22.0 | 19.0 | 10.0 | 101.0 | 100.0 | 103.0 |
N010 | chr4 | 122893225 | 122897623 | TRUE | OK | 92.9 | 0.00544 | 8.641e-23 | 4.175e-19 | -1.779 | -0.889 | 97.0 | 91.0 | 84.0 | 116.0 | 89.0 | 83.0 |
N011 | chr4 | 122897678 | 122912567 | TRUE | OK | 88.7 | 0.00871 | 5.133e-18 | 1.589e-14 | -1.781 | -0.890 | 92.0 | 92.0 | 77.0 | 113.0 | 89.0 | 72.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000138685.15 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |