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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
| MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
| E001 | chr13 | 30713477 | 30713841 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.098 | 0.8631 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 1.0 | 2.0 | 2.0 |
| E002 | chr13 | 30735507 | 30735550 | TRUE | OK | 4.9 | 0.102 | 0.03659 | 0.4842 | 2.019 | 1.009 | 0.0 | 2.0 | 1.0 | 9.0 | 4.0 | 13.0 |
| E003 | chr13 | 30735550 | 30735675 | TRUE | OK | 84.2 | 0.00371 | 5.006e-37 | 5.792e-33 | 3.025 | 1.512 | 13.0 | 11.0 | 9.0 | 151.0 | 164.0 | 151.0 |
| E004 | chr13 | 30742335 | 30742545 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.368 | 0.6192 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
| E005 | chr13 | 30744059 | 30744159 | TRUE | OK | 248.9 | 0.00342 | 0.04437 | 0.515 | 0.289 | 0.144 | 158.0 | 133.0 | 147.0 | 354.0 | 366.0 | 328.0 |
| E006 | chr13 | 30744159 | 30744396 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.362 | 0.5496 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
| E007 | chr13 | 30752051 | 30752122 | TRUE | OK | 213.7 | 0.00378 | 0.2616 | 0.754 | 0.170 | 0.085 | 158.0 | 107.0 | 123.0 | 296.0 | 327.0 | 268.0 |
| E008 | chr13 | 30755943 | 30756025 | TRUE | OK | 201.6 | 0.0127 | 0.3064 | 0.774 | -0.233 | -0.116 | 173.0 | 105.0 | 134.0 | 281.0 | 285.0 | 231.0 |
| E009 | chr13 | 30763943 | 30764425 | TRUE | OK | 321.0 | 0.00681 | 0.1152 | 0.6547 | -0.268 | -0.133 | 254.0 | 194.0 | 195.0 | 402.0 | 497.0 | 380.0 |
| E010 | chr13 | 30764425 | 30764426 | TRUE | OK | 8.5 | 0.0345 | 0.6569 | 0.9032 | -0.223 | -0.111 | 7.0 | 7.0 | 4.0 | 7.0 | 10.0 | 16.0 |
| J011 | chr13 | 30713841 | 30735550 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.116 | 0.7849 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 | 1.0 |
| J012 | chr13 | 30735675 | 30744059 | TRUE | OK | 82.2 | 0.0026 | 5.262e-39 | 6.252e-35 | 3.026 | 1.513 | 12.0 | 11.0 | 9.0 | 145.0 | 163.0 | 147.0 |
| J013 | chr13 | 30742545 | 30744059 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J014 | chr13 | 30744159 | 30752051 | TRUE | OK | 167.3 | 0.0021 | 0.05216 | 0.5396 | 0.273 | 0.137 | 109.0 | 85.0 | 96.0 | 242.0 | 251.0 | 216.0 |
| J015 | chr13 | 30752122 | 30755943 | TRUE | OK | 141.6 | 0.0108 | 0.7831 | 0.9428 | -0.060 | -0.030 | 122.0 | 68.0 | 87.0 | 190.0 | 219.0 | 163.0 |
| J016 | chr13 | 30756025 | 30763943 | TRUE | OK | 121.9 | 0.0129 | 0.2576 | 0.7523 | -0.267 | -0.133 | 117.0 | 65.0 | 76.0 | 168.0 | 170.0 | 138.0 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000132965.9 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |