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Raw Counts Table (ENSG00000100058.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Raw Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr22	25448104	25448284	TRUE	OK	528.9	0.0038	0.4396	0.8258	0.081	0.040	573.0	422.0	427.0	566.0	670.0	528.0
E002	chr22	25455711	25455717	TRUE	OK	380.1	0.00321	0.3608	0.7953	0.100	0.050	426.0	296.0	293.0	400.0	498.0	379.0
E003	chr22	25455717	25455795	TRUE	OK	556.5	0.00387	0.275	0.7605	0.126	0.063	622.0	431.0	433.0	573.0	732.0	564.0
E004	chr22	25455795	25455840	TRUE	OK	473.3	0.0067	0.5474	0.8648	0.075	0.038	546.0	345.0	385.0	486.0	611.0	481.0
E005	chr22	25457258	25457401	TRUE	OK	643.8	0.00405	0.5136	0.8529	0.088	0.044	719.0	517.0	501.0	614.0	879.0	649.0
E006	chr22	25459415	25459515	TRUE	OK	504.4	0.00247	0.9813	0.9962	0.013	0.007	538.0	432.0	405.0	467.0	697.0	495.0
E007	chr22	25459515	25459681	TRUE	OK	314.8	0.00337	0.2451	0.7473	0.142	0.071	342.0	265.0	222.0	310.0	426.0	333.0
E008	chr22	25459975	25460866	TRUE	OK	8.4	0.0289	7.07e-08	3.661e-05	-3.200	-1.600	16.0	13.0	16.0	5.0	0.0	1.0
E009	chr22	25460866	25461668	TRUE	OK	24.3	0.00941	2.038e-18	6.839e-15	-2.924	-1.462	48.0	44.0	36.0	11.0	8.0	2.0
E010	chr22	25461668	25461678	FALSE	LOW_COUNTS_INDEP_FILTER	0.1	0.847	0.5338	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E011	chr22	25509182	25509342	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E012	chr22	25510036	25510070	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.642	0.3208	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	0.0
E013	chr22	25510628	25511628	FALSE	LOW_COUNTS_INDEP_FILTER	0.6	0.175	0.03911	NA	NA	NA	2.0	1.0	1.0	0.0	0.0	0.0
E014	chr22	25518034	25519922	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.642	0.3208	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	0.0
E015	chr22	25519922	25520162	FALSE	LOW_COUNTS_INDEP_FILTER	0.1	0.847	0.5338	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E016	chr22	25520162	25520681	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E017	chr22	25520681	25520853	FALSE	LOW_COUNTS_INDEP_FILTER	0.1	0.847	0.5338	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E018	chr22	25520853	25520854	FALSE	LOW_COUNTS_INDEP_FILTER	0.1	0.847	0.5338	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J019	chr22	25448284	25455711	TRUE	OK	226.6	0.00523	0.1333	0.6733	0.212	0.106	257.0	173.0	153.0	249.0	305.0	232.0
J020	chr22	25455840	25457258	TRUE	OK	424.8	0.00274	0.9284	0.9833	0.008	0.004	488.0	332.0	343.0	404.0	564.0	430.0
J021	chr22	25457401	25459415	TRUE	OK	358.1	0.00203	0.6503	0.9009	-0.039	-0.019	375.0	307.0	305.0	327.0	497.0	340.0
J022	chr22	25459515	25460866	TRUE	OK	6.9	0.0149	5.809e-07	0.0002278	-2.869	-1.435	14.0	9.0	13.0	3.0	2.0	1.0
J023	chr22	25459515	25509182	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J024	chr22	25459515	25519922	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J025	chr22	25509342	25510036	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J026	chr22	25510070	25510628	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.529	0.2911	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	0.0
J027	chr22	25520162	25520681	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N028	chr22	25448284	25453315	TRUE	OK	192.9	0.00469	0.8419	0.9597	0.011	0.005	221.0	147.0	159.0	211.0	229.0	197.0
N029	chr22	25455840	25456157	TRUE	OK	19.0	0.0452	0.5319	0.8593	0.249	0.124	24.0	13.0	11.0	24.0	15.0	29.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000100058.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE