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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr1 | 144421385 | 144421389 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.318 | 0.164 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 |
E002 | chr1 | 144421389 | 144423256 | TRUE | OK | 1600.4 | 0.0123 | 0.205 | 0.7597 | -0.230 | -0.115 | 1478.0 | 1733.0 | 1612.6 | 1481.2 | 1568.8 | 1728.7 |
E003 | chr1 | 144423869 | 144423975 | TRUE | OK | 436.5 | 0.00671 | 0.5437 | 0.8699 | -0.079 | -0.040 | 414.1 | 446.3 | 419.0 | 406.1 | 408.4 | 525.0 |
E004 | chr1 | 144424689 | 144424862 | TRUE | OK | 103.4 | 0.0183 | 0.7451 | 0.934 | -0.074 | -0.037 | 96.6 | 123.0 | 83.6 | 106.2 | 83.2 | 127.6 |
E005 | chr1 | 144425516 | 144425568 | TRUE | OK | 44.7 | 0.0192 | 0.6666 | 0.9094 | 0.139 | 0.070 | 39.4 | 31.3 | 50.4 | 56.6 | 30.4 | 59.9 |
E006 | chr1 | 144426277 | 144426450 | TRUE | OK | 153.1 | 0.00224 | 0.7443 | 0.9338 | -0.042 | -0.021 | 147.9 | 134.5 | 161.2 | 169.8 | 148.9 | 156.6 |
E007 | chr1 | 144427046 | 144427098 | TRUE | OK | 181.2 | 0.00536 | 0.7904 | 0.9472 | 0.037 | 0.018 | 157.8 | 156.4 | 196.4 | 207.5 | 196.8 | 172.1 |
E008 | chr1 | 144427817 | 144427990 | TRUE | OK | 239.8 | 0.00414 | 0.6582 | 0.907 | 0.057 | 0.028 | 218.9 | 203.3 | 248.8 | 281.0 | 253.6 | 233.0 |
E009 | chr1 | 144428605 | 144428657 | TRUE | OK | 168.4 | 0.00305 | 0.6559 | 0.9063 | -0.061 | -0.031 | 156.8 | 146.0 | 188.4 | 188.6 | 165.5 | 165.3 |
E010 | chr1 | 144429699 | 144429863 | TRUE | OK | 123.8 | 0.00419 | 0.2312 | 0.7698 | 0.181 | 0.091 | 123.3 | 88.6 | 118.9 | 144.0 | 115.6 | 152.8 |
E011 | chr1 | 144433772 | 144433824 | TRUE | OK | 154.8 | 0.00371 | 0.0006072 | 0.09956 | 0.476 | 0.238 | 142.0 | 93.8 | 133.0 | 190.6 | 176.3 | 193.4 |
E012 | chr1 | 144435110 | 144435316 | TRUE | OK | 362.5 | 0.00259 | 0.01129 | 0.4087 | 0.263 | 0.132 | 319.5 | 261.7 | 362.6 | 413.0 | 407.4 | 410.9 |
E013 | chr1 | 144435780 | 144435853 | TRUE | OK | 313.9 | 0.0027 | 0.4682 | 0.8455 | 0.076 | 0.038 | 281.0 | 258.6 | 333.4 | 353.4 | 332.0 | 324.9 |
E014 | chr1 | 144436894 | 144437109 | TRUE | OK | 527.1 | 0.0028 | 0.4864 | 0.8516 | 0.067 | 0.033 | 504.8 | 420.2 | 546.9 | 597.7 | 544.5 | 548.2 |
E015 | chr1 | 144437944 | 144438047 | TRUE | OK | 437.4 | 0.00387 | 0.423 | 0.8308 | 0.091 | 0.045 | 455.5 | 334.7 | 421.0 | 488.5 | 427.9 | 497.0 |
E016 | chr1 | 144439828 | 144439992 | TRUE | OK | 452.0 | 0.00457 | 0.7513 | 0.9356 | 0.036 | 0.018 | 454.5 | 344.1 | 476.4 | 498.4 | 416.2 | 522.1 |
E017 | chr1 | 144439992 | 144440038 | TRUE | OK | 268.2 | 0.00353 | 0.9849 | 0.9962 | -0.002 | -0.001 | 261.3 | 208.5 | 296.1 | 286.9 | 246.8 | 309.4 |
E018 | chr1 | 144440140 | 144440208 | TRUE | OK | 320.0 | 0.00312 | 0.8036 | 0.9509 | -0.031 | -0.016 | 298.8 | 264.9 | 359.6 | 325.6 | 297.7 | 373.2 |
E019 | chr1 | 144440208 | 144440295 | TRUE | OK | 278.0 | 0.00176 | 0.6847 | 0.9151 | 0.040 | 0.020 | 256.4 | 232.5 | 294.1 | 284.9 | 277.1 | 322.9 |
E020 | chr1 | 144440401 | 144440581 | TRUE | OK | 86.9 | 0.025 | 0.5667 | 0.8771 | 0.166 | 0.083 | 68.0 | 103.2 | 62.4 | 86.4 | 82.3 | 118.9 |
E021 | chr1 | 144442669 | 144442920 | TRUE | OK | 214.7 | 0.00643 | 0.1194 | 0.7155 | 0.239 | 0.119 | 215.9 | 144.9 | 201.4 | 224.4 | 223.3 | 278.4 |
E022 | chr1 | 144448774 | 144448825 | TRUE | OK | 211.3 | 0.0103 | 0.5377 | 0.8681 | 0.100 | 0.050 | 232.7 | 140.8 | 208.5 | 248.2 | 197.8 | 239.8 |
E023 | chr1 | 144448825 | 144448916 | TRUE | OK | 258.7 | 0.011 | 0.2186 | 0.7644 | 0.213 | 0.106 | 267.2 | 159.5 | 257.8 | 302.8 | 254.6 | 310.4 |
E024 | chr1 | 144450771 | 144450802 | TRUE | OK | 216.1 | 0.00839 | 0.0969 | 0.696 | 0.271 | 0.135 | 210.0 | 132.4 | 216.6 | 255.1 | 220.3 | 262.0 |
E025 | chr1 | 144450802 | 144450870 | TRUE | OK | 224.8 | 0.00554 | 0.1097 | 0.7077 | 0.230 | 0.115 | 219.9 | 152.2 | 218.6 | 272.0 | 220.3 | 265.9 |
E026 | chr1 | 144456536 | 144456761 | TRUE | OK | 532.5 | 0.0107 | 0.5533 | 0.8728 | 0.084 | 0.042 | 585.7 | 358.7 | 534.8 | 574.8 | 532.7 | 608.1 |
E027 | chr1 | 144456761 | 144456805 | TRUE | OK | 284.2 | 0.00965 | 0.3779 | 0.8161 | -0.176 | -0.088 | 352.0 | 215.8 | 292.1 | 282.9 | 258.5 | 303.6 |
E028 | chr1 | 144456805 | 144456809 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.7 | 0.135 | 0.4967 | NA | NA | NA | 5.9 | 5.2 | 7.1 | 11.9 | 2.0 | 1.9 |
E029 | chr1 | 144459365 | 144459483 | TRUE | OK | 413.0 | 0.00978 | 0.7712 | 0.9416 | 0.030 | 0.015 | 464.4 | 287.8 | 415.0 | 458.7 | 410.3 | 441.8 |
E030 | chr1 | 144460842 | 144460961 | TRUE | OK | 371.3 | 0.00728 | 0.6758 | 0.9122 | 0.055 | 0.028 | 396.4 | 269.0 | 374.7 | 431.9 | 348.6 | 407.0 |
E031 | chr1 | 144461380 | 144461558 | TRUE | OK | 467.2 | 0.0067 | 0.3859 | 0.8189 | -0.134 | -0.067 | 516.7 | 371.2 | 504.6 | 517.2 | 405.4 | 488.3 |
E032 | chr1 | 144461558 | 144461591 | TRUE | OK | 181.0 | 0.0118 | 0.3572 | 0.8098 | -0.186 | -0.093 | 214.0 | 140.8 | 195.4 | 195.6 | 136.1 | 204.0 |
E033 | chr1 | 144461591 | 144461644 | TRUE | OK | 94.1 | 0.00793 | 0.2341 | 0.7706 | -0.229 | -0.114 | 105.5 | 75.1 | 109.8 | 94.3 | 70.5 | 109.3 |
E034 | chr1 | 144461644 | 144461647 | TRUE | OK | 15.6 | 0.0316 | 0.09151 | 0.6905 | -0.683 | -0.342 | 21.7 | 14.6 | 19.1 | 8.9 | 7.8 | 21.3 |
E035 | chr1 | 144461647 | 144461674 | TRUE | OK | 14.0 | 0.0834 | 0.251 | 0.7756 | -0.562 | -0.281 | 21.7 | 10.4 | 16.1 | 6.0 | 6.9 | 23.2 |
J036 | chr1 | 144423256 | 144423869 | TRUE | OK | 415.7 | 0.00699 | 0.5815 | 0.8817 | -0.072 | -0.036 | 393.4 | 424.4 | 397.9 | 384.2 | 387.8 | 506.6 |
J037 | chr1 | 144423975 | 144424689 | TRUE | OK | 72.2 | 0.0293 | 0.6184 | 0.8939 | -0.147 | -0.073 | 66.1 | 93.8 | 57.4 | 67.5 | 53.9 | 94.7 |
J038 | chr1 | 144424862 | 144425516 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0132 | 0.6171 | NA | NA | NA | 7.9 | 7.3 | 6.0 | 11.9 | 6.9 | 8.7 |
J039 | chr1 | 144425568 | 144426277 | TRUE | OK | 34.6 | 0.0216 | 0.7121 | 0.9236 | 0.135 | 0.068 | 30.6 | 24.0 | 39.3 | 40.7 | 22.5 | 50.3 |
J040 | chr1 | 144426450 | 144427046 | TRUE | OK | 112.1 | 0.0018 | 0.886 | 0.9726 | 0.016 | 0.008 | 107.5 | 91.8 | 118.9 | 122.1 | 115.6 | 117.0 |
J041 | chr1 | 144427098 | 144427817 | TRUE | OK | 107.7 | 0.00702 | 0.324 | 0.7991 | 0.176 | 0.088 | 84.8 | 91.8 | 111.8 | 132.0 | 123.4 | 102.5 |
J042 | chr1 | 144427990 | 144428605 | TRUE | OK | 155.9 | 0.00219 | 0.5488 | 0.8717 | -0.077 | -0.038 | 144.0 | 140.8 | 172.2 | 168.8 | 159.6 | 149.9 |
J043 | chr1 | 144428657 | 144429699 | TRUE | OK | 52.3 | 0.00368 | 0.9285 | 0.9832 | -0.020 | -0.010 | 53.2 | 37.5 | 59.4 | 53.6 | 47.0 | 62.8 |
J044 | chr1 | 144429863 | 144433772 | TRUE | OK | 62.3 | 0.00894 | 0.1277 | 0.7221 | 0.339 | 0.169 | 62.1 | 44.8 | 49.4 | 81.4 | 53.9 | 82.2 |
J045 | chr1 | 144433824 | 144435110 | TRUE | OK | 133.9 | 0.0022 | 2.54e-05 | 0.01132 | 0.546 | 0.273 | 108.5 | 80.3 | 120.9 | 167.8 | 161.6 | 164.4 |
J046 | chr1 | 144435316 | 144435780 | TRUE | OK | 234.4 | 0.0026 | 0.1544 | 0.7364 | 0.160 | 0.080 | 207.1 | 177.3 | 247.8 | 275.0 | 246.8 | 252.3 |
J047 | chr1 | 144435853 | 144436894 | TRUE | OK | 213.7 | 0.00202 | 0.6408 | 0.9014 | -0.055 | -0.027 | 204.1 | 185.6 | 231.7 | 238.3 | 213.5 | 208.8 |
J048 | chr1 | 144437109 | 144437944 | TRUE | OK | 269.2 | 0.00138 | 0.04179 | 0.6003 | 0.194 | 0.097 | 261.3 | 203.3 | 252.8 | 295.9 | 292.8 | 309.4 |
J049 | chr1 | 144438047 | 144439828 | TRUE | OK | 270.8 | 0.00619 | 0.5444 | 0.8701 | 0.090 | 0.045 | 285.0 | 203.3 | 260.9 | 316.7 | 242.9 | 316.2 |
J050 | chr1 | 144440038 | 144440140 | TRUE | OK | 218.1 | 0.00494 | 0.521 | 0.8626 | -0.094 | -0.047 | 213.0 | 175.2 | 254.8 | 215.4 | 191.0 | 259.1 |
J051 | chr1 | 144440295 | 144440401 | TRUE | OK | 19.1 | 0.0319 | 0.7338 | 0.9307 | -0.114 | -0.057 | 17.7 | 25.0 | 14.1 | 14.9 | 14.7 | 28.0 |
J052 | chr1 | 144440295 | 144448774 | TRUE | OK | 103.5 | 0.00937 | 0.4457 | 0.838 | 0.136 | 0.068 | 100.6 | 64.6 | 115.8 | 127.1 | 100.9 | 112.2 |
J053 | chr1 | 144440581 | 144442669 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.5 | 0.0451 | 0.6297 | NA | NA | NA | 3.9 | 4.2 | 6.0 | 1.0 | 3.9 | 7.7 |
J054 | chr1 | 144442920 | 144448774 | TRUE | OK | 10.3 | 0.0128 | 0.8146 | 0.9539 | -0.092 | -0.046 | 12.8 | 9.4 | 8.1 | 9.9 | 6.9 | 14.5 |
J055 | chr1 | 144448916 | 144450771 | TRUE | OK | 161.9 | 0.00806 | 0.07827 | 0.6751 | 0.297 | 0.149 | 153.8 | 97.0 | 163.2 | 194.6 | 162.6 | 200.1 |
J056 | chr1 | 144448916 | 144456536 | TRUE | OK | 21.2 | 0.0466 | 0.3464 | 0.806 | 0.343 | 0.171 | 30.6 | 9.4 | 13.1 | 22.8 | 24.5 | 27.1 |
J057 | chr1 | 144450802 | 144456536 | TRUE | OK | 37.8 | 0.0132 | 0.2832 | 0.786 | 0.290 | 0.145 | 38.5 | 20.9 | 37.3 | 46.7 | 31.3 | 52.2 |
J058 | chr1 | 144450870 | 144456536 | TRUE | OK | 124.1 | 0.0169 | 0.4986 | 0.8552 | 0.139 | 0.069 | 139.0 | 71.9 | 125.9 | 125.1 | 121.4 | 161.5 |
J059 | chr1 | 144456805 | 144459365 | TRUE | OK | 125.2 | 0.00683 | 0.1501 | 0.7349 | -0.259 | -0.129 | 150.9 | 99.1 | 140.0 | 104.2 | 122.4 | 134.4 |
J060 | chr1 | 144456805 | 144461380 | TRUE | OK | 30.3 | 0.0611 | 0.3514 | 0.8077 | -0.510 | -0.255 | 56.2 | 20.9 | 25.2 | 36.7 | 21.5 | 21.3 |
J061 | chr1 | 144459483 | 144460842 | TRUE | OK | 121.8 | 0.0175 | 0.7871 | 0.9462 | 0.066 | 0.033 | 141.0 | 87.6 | 110.8 | 164.8 | 105.8 | 120.9 |
J062 | chr1 | 144459483 | 144461380 | TRUE | OK | 47.1 | 0.00334 | 0.1163 | 0.7132 | -0.310 | -0.155 | 55.2 | 45.9 | 48.3 | 48.6 | 38.2 | 46.4 |
J063 | chr1 | 144460961 | 144461380 | TRUE | OK | 128.9 | 0.0128 | 0.9032 | 0.9769 | 0.009 | 0.004 | 139.0 | 83.4 | 144.0 | 155.9 | 113.6 | 137.3 |
N064 | chr1 | 144440295 | 144442669 | TRUE | OK | 21.0 | 0.00531 | 0.229 | 0.7687 | 0.345 | 0.172 | 16.8 | 17.7 | 18.1 | 22.8 | 24.5 | 26.1 |
N065 | chr1 | 144442917 | 144448774 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.9 | 0.0217 | 0.9279 | NA | NA | NA | 11.8 | 3.1 | 10.1 | 7.9 | 7.8 | 12.6 |
N066 | chr1 | 144452149 | 144456536 | TRUE | OK | 46.4 | 0.0036 | 0.02314 | 0.5139 | 0.456 | 0.228 | 37.5 | 28.2 | 45.3 | 60.6 | 49.0 | 58.0 |
N067 | chr1 | 144456805 | 144458846 | TRUE | OK | 55.2 | 0.0523 | 0.6561 | 0.9063 | 0.094 | 0.047 | 76.9 | 22.9 | 52.4 | 63.5 | 46.0 | 69.6 |
N068 | chr1 | 144459036 | 144459365 | TRUE | OK | 79.2 | 0.0161 | 0.03701 | 0.5828 | 0.501 | 0.250 | 85.8 | 45.9 | 54.4 | 104.2 | 93.0 | 91.8 |
N069 | chr1 | 144459464 | 144460842 | TRUE | OK | 23.4 | 0.0068 | 0.1556 | 0.7371 | 0.394 | 0.197 | 25.6 | 11.5 | 20.1 | 25.8 | 27.4 | 30.0 |
N070 | chr1 | 144459464 | 144461380 | TRUE | OK | 16.8 | 0.117 | 0.5656 | 0.8767 | 0.168 | 0.084 | 20.7 | 2.1 | 22.2 | 18.9 | 18.6 | 18.4 |
N071 | chr1 | 144459488 | 144460842 | TRUE | OK | 29.3 | 0.0231 | 0.4528 | 0.8403 | -0.265 | -0.132 | 41.4 | 18.8 | 31.2 | 29.8 | 19.6 | 34.8 |
N072 | chr1 | 144460961 | 144461410 | TRUE | OK | 18.7 | 0.00664 | 0.1276 | 0.7219 | 0.466 | 0.233 | 13.8 | 12.5 | 18.1 | 21.8 | 25.5 | 20.3 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000266338.6 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |