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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 55233933 | 55234040 | TRUE | OK | 11.3 | 0.0133 | 0.7503 | 0.9353 | -0.128 | -0.064 | 12.8 | 10.4 | 11.1 | 10.9 | 8.8 | 13.5 |
E002 | chr5 | 55279532 | 55279649 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.8 | 0.0363 | 0.7141 | NA | NA | NA | 6.9 | 7.3 | 4.0 | 8.9 | 2.9 | 4.8 |
E003 | chr5 | 55283027 | 55283152 | TRUE | OK | 13.8 | 0.0386 | 0.2931 | 0.7896 | 0.499 | 0.250 | 12.8 | 13.6 | 7.1 | 23.8 | 11.8 | 13.5 |
E004 | chr5 | 55283769 | 55283828 | TRUE | OK | 274.9 | 0.00682 | 0.8107 | 0.9528 | -0.067 | -0.033 | 281.0 | 253.4 | 269.9 | 266.1 | 283.0 | 295.9 |
E005 | chr5 | 55294839 | 55295201 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.3 | 0.0943 | 0.5062 | NA | NA | NA | 1.0 | 7.3 | 10.1 | 6.0 | 7.8 | 11.6 |
J006 | chr5 | 55234040 | 55279532 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J007 | chr5 | 55279649 | 55283027 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.3 | 0.0282 | 0.6099 | NA | NA | NA | 3.9 | 4.2 | 3.0 | 7.9 | 2.9 | 3.9 |
J008 | chr5 | 55283152 | 55283769 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.044 | 0.04253 | NA | NA | NA | 0.0 | 3.1 | 1.0 | 6.0 | 4.9 | 2.9 |
J009 | chr5 | 55283828 | 55294839 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.107 | 0.7645 | NA | NA | NA | 0.0 | 2.1 | 5.0 | 2.0 | 2.0 | 1.9 |
N010 | chr5 | 55256540 | 55259847 | TRUE | OK | 282.3 | 1.45 | 0.02414 | 0.52 | -2.668 | -1.307 | 265.2 | 390.0 | 317.3 | 255.1 | 223.3 | 242.7 |
N011 | chr5 | 55259944 | 55261367 | TRUE | OK | 293.8 | 1.51 | 0.04658 | 0.6153 | -2.086 | -1.019 | 264.3 | 398.3 | 321.3 | 273.0 | 261.5 | 244.6 |
N012 | chr5 | 55261499 | 55262629 | FALSE | ALL_ZERO | 381.0 | NA | NA | NA | NA | NA | 392.4 | 471.3 | 379.7 | 361.4 | 323.2 | 357.7 |
N013 | chr5 | 55262932 | 55267137 | TRUE | OK | 300.0 | 1.07 | 0.03506 | 0.5745 | -2.417 | -1.154 | 290.9 | 324.3 | 342.5 | 282.0 | 258.5 | 301.7 |
N014 | chr5 | 55267231 | 55267685 | TRUE | OK | 293.6 | 1.92 | 0.6923 | 0.9174 | 1.121 | 0.539 | 273.1 | 321.2 | 261.9 | 289.9 | 281.1 | 334.5 |
N015 | chr5 | 55267822 | 55269412 | TRUE | OK | 308.4 | 3.04 | 0.9975 | 0.9993 | -0.897 | -0.403 | 326.4 | 297.2 | 282.0 | 321.7 | 283.0 | 340.3 |
N016 | chr5 | 55269637 | 55270411 | FALSE | ALL_ZERO | 413.2 | NA | NA | NA | NA | NA | 476.2 | 412.9 | 481.5 | 352.4 | 386.8 | 369.3 |
N017 | chr5 | 55270487 | 55270577 | TRUE | OK | 346.3 | 0.0245 | 1.008e-14 | 5.757e-11 | -28.663 | -4.805 | 411.2 | 356.6 | 422.0 | 289.9 | 290.8 | 307.5 |
N018 | chr5 | 55270706 | 55272086 | TRUE | OK | 204.8 | 0.0372 | 0.02526 | 0.5266 | -0.773 | -0.385 | 208.0 | 201.2 | 241.7 | 203.5 | 180.2 | 194.3 |
N019 | chr5 | 55272175 | 55273292 | TRUE | OK | 232.2 | 0.0169 | 0.9671 | 0.9923 | 0.008 | 0.004 | 248.5 | 196.0 | 232.7 | 229.3 | 240.9 | 245.6 |
N020 | chr5 | 55273377 | 55274613 | TRUE | OK | 254.6 | 0.0938 | 0.9868 | 0.9968 | 0.118 | 0.058 | 277.1 | 197.1 | 263.9 | 257.1 | 259.5 | 272.6 |
N021 | chr5 | 55274731 | 55274865 | TRUE | OK | 313.5 | 2.26 | 0.5646 | 0.8764 | 1.472 | 0.677 | 352.0 | 246.1 | 359.6 | 300.8 | 296.7 | 325.8 |
N022 | chr5 | 55275010 | 55276265 | TRUE | OK | 308.8 | 3.97 | 0.6207 | 0.8947 | 28.683 | 4.874 | 345.1 | 230.4 | 307.2 | 334.6 | 304.6 | 330.7 |
N023 | chr5 | 55276406 | 55277105 | TRUE | OK | 217.7 | 0.0537 | 0.6144 | 0.8926 | -0.190 | -0.095 | 209.0 | 192.9 | 245.8 | 228.3 | 215.4 | 214.6 |
N024 | chr5 | 55277282 | 55281371 | TRUE | OK | 310.4 | 1.29 | 0.2647 | 0.7807 | -2.776 | -1.154 | 334.3 | 279.4 | 310.2 | 324.6 | 288.9 | 324.9 |
N025 | chr5 | 55281515 | 55283202 | TRUE | OK | 312.0 | 3.34 | 0.9746 | 0.9938 | -2.564 | -1.165 | 381.6 | 285.7 | 285.0 | 330.6 | 258.5 | 330.7 |
N026 | chr5 | 55281515 | 55283355 | TRUE | OK | 11.1 | 0.0244 | 0.954 | 0.9894 | 0.010 | 0.005 | 15.8 | 6.3 | 10.1 | 14.9 | 10.8 | 8.7 |
N027 | chr5 | 55283811 | 55285292 | TRUE | OK | 234.7 | 0.00252 | 0.2276 | 0.7681 | -0.219 | -0.109 | 243.5 | 222.1 | 231.7 | 222.4 | 236.0 | 252.3 |
N028 | chr5 | 55285416 | 55285695 | TRUE | OK | 267.9 | 0.258 | 0.3113 | 0.7948 | -0.868 | -0.427 | 305.7 | 250.3 | 253.8 | 282.0 | 260.5 | 255.2 |
N029 | chr5 | 55285861 | 55289269 | TRUE | OK | 248.0 | 0.985 | 0.1965 | 0.7564 | -1.753 | -0.866 | 311.6 | 239.8 | 249.8 | 240.3 | 204.7 | 241.7 |
N030 | chr5 | 55289428 | 55290217 | TRUE | OK | 298.9 | 1.33 | 0.06558 | 0.6555 | -2.017 | -0.970 | 344.1 | 341.0 | 266.9 | 288.9 | 256.6 | 295.9 |
N031 | chr5 | 55290344 | 55294016 | TRUE | OK | 307.7 | 2.37 | 0.05745 | 0.6425 | -28.172 | -5.241 | 332.3 | 369.1 | 301.2 | 301.8 | 247.8 | 293.9 |
N032 | chr5 | 55294145 | 55295378 | TRUE | OK | 235.5 | 0.0539 | 0.1891 | 0.7533 | -0.547 | -0.272 | 242.6 | 248.2 | 226.6 | 245.2 | 200.8 | 249.4 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000251307.1 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |