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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chrX | 153735625 | 153735959 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0905 | 0.6377 | NA | NA | NA | 3.0 | 3.1 | 2.0 | 6.0 | 2.9 | 1.9 |
E002 | chrX | 153738069 | 153738578 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0504 | 0.9638 | NA | NA | NA | 3.0 | 4.2 | 2.0 | 4.0 | 2.0 | 3.9 |
E003 | chrX | 153760490 | 153760613 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.0517 | 0.4247 | NA | NA | NA | 2.0 | 1.0 | 3.0 | 3.0 | 2.9 | 3.9 |
E004 | chrX | 153763792 | 153763817 | TRUE | OK | 11.7 | 0.0224 | 0.4145 | 0.8285 | -0.371 | -0.185 | 14.8 | 11.5 | 11.1 | 6.0 | 8.8 | 18.4 |
E005 | chrX | 153766382 | 153766453 | TRUE | OK | 21.5 | 0.024 | 0.4915 | 0.8531 | -0.330 | -0.164 | 29.6 | 16.7 | 19.1 | 14.9 | 16.6 | 31.9 |
E006 | chrX | 153766453 | 153766478 | TRUE | OK | 13.7 | 0.0301 | 0.6172 | 0.8936 | -0.255 | -0.127 | 19.7 | 8.3 | 14.1 | 6.9 | 13.7 | 19.3 |
J007 | chrX | 153735959 | 153738069 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J008 | chrX | 153738578 | 153766382 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J009 | chrX | 153760613 | 153763792 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J010 | chrX | 153763817 | 153766382 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.6 | 0.0492 | 0.5852 | NA | NA | NA | 12.8 | 7.3 | 4.0 | 6.0 | 2.9 | 12.6 |
N011 | chrX | 153729412 | 153736111 | TRUE | OK | 14.3 | 0.0118 | 9.88e-06 | 0.005463 | -2.050 | -1.023 | 23.7 | 15.6 | 19.1 | 5.0 | 9.8 | 12.6 |
N012 | chrX | 153736254 | 153736344 | TRUE | OK | 18.6 | 0.358 | 0.1015 | 0.6994 | -1.611 | -0.803 | 26.6 | 27.1 | 14.1 | 13.9 | 14.7 | 15.5 |
N013 | chrX | 153736513 | 153737156 | TRUE | OK | 21.0 | 0.0294 | 1.593e-12 | 6.926e-09 | -4.251 | -2.110 | 37.5 | 25.0 | 26.2 | 11.9 | 12.7 | 12.6 |
N014 | chrX | 153737251 | 153740091 | TRUE | OK | 22.3 | 0.0114 | 4.323e-11 | 1.308e-07 | -3.550 | -1.761 | 34.5 | 24.0 | 29.2 | 13.9 | 14.7 | 17.4 |
N015 | chrX | 153740237 | 153740573 | TRUE | OK | 11.8 | 0.0168 | 0.1352 | 0.7264 | -0.748 | -0.373 | 17.7 | 9.4 | 13.1 | 9.9 | 10.8 | 9.7 |
N016 | chrX | 153740719 | 153742986 | TRUE | OK | 15.4 | 0.0329 | 0.2645 | 0.7807 | -0.622 | -0.310 | 23.7 | 13.6 | 13.1 | 10.9 | 16.6 | 14.5 |
N017 | chrX | 153743071 | 153743220 | TRUE | OK | 24.2 | 0.0923 | 0.06116 | 0.6498 | -1.518 | -0.754 | 32.5 | 21.9 | 26.2 | 19.9 | 24.5 | 20.3 |
N018 | chrX | 153743346 | 153743488 | TRUE | OK | 20.2 | 0.14 | 0.6964 | 0.9187 | -0.306 | -0.152 | 18.7 | 20.9 | 22.2 | 13.9 | 24.5 | 21.3 |
N019 | chrX | 153764304 | 153765470 | TRUE | OK | 20.7 | 2.53 | 0.8874 | 0.9729 | -0.112 | -0.056 | 13.8 | 12.5 | 34.2 | 19.9 | 36.2 | 7.7 |
N020 | chrX | 153765580 | 153766872 | TRUE | OK | 11.9 | 0.531 | 0.563 | 0.8759 | 0.587 | 0.293 | 8.9 | 4.2 | 17.1 | 9.9 | 25.5 | 5.8 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000232725.1 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |