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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr2 | 186641338 | 186641690 | FALSE | ALL_ZERO | 1685.1 | NA | NA | NA | NA | NA | 1647.6 | 833.1 | 1618.6 | 2057.1 | 1746.1 | 2208.3 |
E002 | chr2 | 186660493 | 186660581 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E003 | chr2 | 186695156 | 186695287 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J004 | chr2 | 186641690 | 186660493 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J005 | chr2 | 186660581 | 186695156 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N006 | chr2 | 186640967 | 186641385 | TRUE | OK | 837.6 | 0.00313 | 0.5011 | 0.8559 | 0.059 | 0.029 | 843.0 | 382.7 | 786.6 | 997.8 | 868.6 | 1146.7 |
N007 | chr2 | 186641588 | 186646685 | TRUE | OK | 933.2 | 0.00144 | 0.7568 | 0.9373 | 0.034 | 0.017 | 887.4 | 475.5 | 893.4 | 1168.5 | 973.4 | 1200.8 |
N008 | chr2 | 186646877 | 186649839 | TRUE | OK | 822.3 | 0.00481 | 0.9957 | 0.9989 | 0.016 | 0.008 | 814.4 | 436.9 | 742.3 | 1012.6 | 891.1 | 1036.4 |
N009 | chr2 | 186649885 | 186651981 | TRUE | OK | 769.3 | 0.00464 | 0.8048 | 0.9512 | -0.042 | -0.021 | 783.9 | 385.8 | 719.2 | 941.2 | 849.0 | 936.9 |
N010 | chr2 | 186652089 | 186654649 | TRUE | OK | 718.8 | 0.00558 | 0.651 | 0.9048 | -0.074 | -0.037 | 702.0 | 361.8 | 715.1 | 896.5 | 791.3 | 846.0 |
N011 | chr2 | 186654708 | 186656246 | TRUE | OK | 797.6 | 0.00912 | 0.8802 | 0.9712 | -0.005 | -0.003 | 742.5 | 432.7 | 767.5 | 985.8 | 895.1 | 962.0 |
N012 | chr2 | 186656401 | 186659037 | TRUE | OK | 991.6 | 0.00467 | 0.004052 | 0.2687 | -0.355 | -0.177 | 1019.5 | 550.6 | 987.1 | 1156.6 | 1035.1 | 1200.8 |
N013 | chr2 | 186659175 | 186663767 | TRUE | OK | 910.8 | 0.00699 | 0.06901 | 0.6613 | -0.293 | -0.146 | 990.9 | 470.3 | 877.3 | 1068.2 | 970.5 | 1087.7 |
N014 | chr2 | 186663835 | 186664493 | TRUE | OK | 882.9 | 0.00641 | 0.2443 | 0.7737 | -0.178 | -0.089 | 918.0 | 459.8 | 845.1 | 1032.5 | 971.4 | 1070.3 |
N015 | chr2 | 186664641 | 186665125 | TRUE | OK | 865.7 | 0.0053 | 0.5708 | 0.8785 | -0.077 | -0.039 | 888.4 | 448.4 | 801.7 | 1034.5 | 947.9 | 1073.2 |
N016 | chr2 | 186665218 | 186666703 | TRUE | OK | 824.6 | 0.00592 | 9.925e-05 | 0.03101 | -0.516 | -0.257 | 895.3 | 491.1 | 837.0 | 884.6 | 792.2 | 1047.1 |
N017 | chr2 | 186666783 | 186667149 | TRUE | OK | 874.8 | 0.00567 | 3.256e-06 | 0.002244 | -0.621 | -0.310 | 975.2 | 517.2 | 896.4 | 924.3 | 845.1 | 1090.6 |
N018 | chr2 | 186667230 | 186667670 | TRUE | OK | 906.5 | 0.00114 | 1.516e-05 | 0.007694 | -0.351 | -0.175 | 935.7 | 491.1 | 925.6 | 1041.4 | 922.5 | 1122.5 |
N019 | chr2 | 186667776 | 186668761 | TRUE | OK | 885.0 | 0.0029 | 0.3705 | 0.8136 | -0.096 | -0.048 | 857.8 | 452.5 | 883.3 | 1017.6 | 947.0 | 1151.5 |
N020 | chr2 | 186668920 | 186669700 | TRUE | OK | 806.3 | 0.00995 | 0.5887 | 0.8842 | -0.048 | -0.024 | 784.9 | 461.9 | 735.3 | 943.1 | 873.5 | 1039.3 |
N021 | chr2 | 186669814 | 186675603 | TRUE | OK | 746.3 | 0.0104 | 0.1069 | 0.7045 | -0.229 | -0.114 | 744.4 | 455.7 | 711.1 | 874.6 | 747.2 | 944.6 |
N022 | chr2 | 186675717 | 186675819 | TRUE | OK | 864.6 | 0.00571 | 1.57e-08 | 2.374e-05 | -0.749 | -0.374 | 973.2 | 537.0 | 907.5 | 950.1 | 795.2 | 1024.8 |
N023 | chr2 | 186675927 | 186676812 | TRUE | OK | 965.3 | 0.0102 | 0.0203 | 0.4945 | -0.376 | -0.187 | 967.3 | 558.9 | 977.0 | 1105.0 | 1017.5 | 1166.0 |
N024 | chr2 | 186676935 | 186677196 | TRUE | OK | 1020.1 | 0.0155 | 0.6027 | 0.8886 | -0.058 | -0.029 | 920.9 | 564.1 | 1020.3 | 1182.4 | 1103.6 | 1329.4 |
N025 | chr2 | 186694411 | 186740227 | TRUE | OK | 29.8 | 0.00733 | 0.07951 | 0.6762 | 0.460 | 0.230 | 28.6 | 11.5 | 19.1 | 45.7 | 38.2 | 35.8 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000227227.1 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |