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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr1 | 33307347 | 33307365 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E002 | chr1 | 33307365 | 33307369 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E003 | chr1 | 33307369 | 33307370 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E004 | chr1 | 33307370 | 33307437 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E005 | chr1 | 33307437 | 33307449 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E006 | chr1 | 33313323 | 33313515 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E007 | chr1 | 33313515 | 33313717 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E008 | chr1 | 33314064 | 33314509 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.391 | 0.8513 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 |
E009 | chr1 | 33314509 | 33314689 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.86 | 0.7098 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
E010 | chr1 | 33314689 | 33314823 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E011 | chr1 | 33325152 | 33325179 | TRUE | OK | 18.0 | 0.0143 | 0.195 | 0.7559 | 0.480 | 0.240 | 14.8 | 14.6 | 11.1 | 20.8 | 21.5 | 25.1 |
E012 | chr1 | 33325179 | 33325401 | TRUE | OK | 34.1 | 0.00962 | 0.7971 | 0.949 | 0.083 | 0.041 | 29.6 | 29.2 | 30.2 | 36.7 | 37.2 | 41.6 |
E013 | chr1 | 33325401 | 33325467 | TRUE | OK | 20.6 | 0.0408 | 0.6932 | 0.9177 | -0.149 | -0.074 | 14.8 | 25.0 | 18.1 | 18.9 | 22.5 | 24.2 |
E014 | chr1 | 33325467 | 33325620 | TRUE | OK | 26.1 | 0.0473 | 0.9204 | 0.9814 | 0.095 | 0.047 | 21.7 | 21.9 | 24.2 | 21.8 | 23.5 | 43.5 |
E015 | chr1 | 33325620 | 33325627 | TRUE | OK | 14.0 | 0.0567 | 0.894 | 0.9746 | -0.057 | -0.028 | 14.8 | 7.3 | 16.1 | 8.9 | 12.7 | 24.2 |
E016 | chr1 | 33325627 | 33325771 | TRUE | OK | 20.1 | 0.0348 | 0.9838 | 0.996 | 0.024 | 0.012 | 17.7 | 14.6 | 21.2 | 12.9 | 26.4 | 28.0 |
E017 | chr1 | 33325771 | 33325898 | TRUE | OK | 21.2 | 0.0537 | 0.5773 | 0.8805 | -0.206 | -0.103 | 19.7 | 18.8 | 22.2 | 11.9 | 33.3 | 21.3 |
E018 | chr1 | 33325898 | 33325903 | TRUE | OK | 10.4 | 0.112 | 0.5364 | 0.8676 | -0.237 | -0.118 | 9.9 | 9.4 | 11.1 | 5.0 | 21.5 | 5.8 |
E019 | chr1 | 33325903 | 33325955 | TRUE | OK | 13.7 | 0.0851 | 0.787 | 0.9462 | -0.045 | -0.022 | 15.8 | 10.4 | 11.1 | 11.9 | 26.4 | 6.8 |
E020 | chr1 | 33325955 | 33326043 | TRUE | OK | 13.9 | 0.0453 | 0.9297 | 0.9834 | 0.067 | 0.033 | 14.8 | 7.3 | 14.1 | 15.9 | 23.5 | 7.7 |
E021 | chr1 | 33326043 | 33326410 | TRUE | OK | 30.3 | 0.0164 | 0.4076 | 0.8263 | -0.302 | -0.151 | 27.6 | 16.7 | 44.3 | 26.8 | 35.3 | 30.9 |
E022 | chr1 | 33333247 | 33333654 | TRUE | OK | 23.6 | 0.00752 | 0.3546 | 0.8089 | 0.277 | 0.139 | 20.7 | 13.6 | 23.2 | 31.8 | 27.4 | 25.1 |
E023 | chr1 | 33345139 | 33345832 | TRUE | OK | 18.0 | 0.0396 | 0.2821 | 0.7855 | 0.488 | 0.244 | 18.7 | 6.3 | 15.1 | 33.8 | 17.6 | 16.4 |
E024 | chr1 | 33346926 | 33346973 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.0284 | 0.8607 | NA | NA | NA | 6.9 | 4.2 | 4.0 | 6.9 | 6.9 | 3.9 |
E025 | chr1 | 33347672 | 33347849 | TRUE | OK | 9.6 | 0.0762 | 0.7809 | 0.9447 | 0.264 | 0.132 | 4.9 | 8.3 | 10.1 | 19.9 | 9.8 | 4.8 |
E026 | chr1 | 33349067 | 33349245 | TRUE | OK | 14.9 | 0.0151 | 0.03677 | 0.5819 | -0.818 | -0.409 | 18.7 | 8.3 | 24.2 | 15.9 | 9.8 | 12.6 |
J027 | chr1 | 33307437 | 33325152 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J028 | chr1 | 33307437 | 33325179 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J029 | chr1 | 33307449 | 33314689 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J030 | chr1 | 33307449 | 33325179 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J031 | chr1 | 33307449 | 33325620 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J032 | chr1 | 33313717 | 33314509 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J033 | chr1 | 33313717 | 33325179 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J034 | chr1 | 33314823 | 33325179 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J035 | chr1 | 33314823 | 33325620 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J036 | chr1 | 33325771 | 33333247 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J037 | chr1 | 33325771 | 33345139 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J038 | chr1 | 33325771 | 33346926 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J039 | chr1 | 33346973 | 33347672 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J040 | chr1 | 33347849 | 33349067 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N041 | chr1 | 33325019 | 33327347 | TRUE | OK | 23.8 | 0.0863 | 0.7971 | 0.949 | 0.171 | 0.085 | 9.9 | 25.0 | 25.2 | 38.7 | 17.6 | 26.1 |
N042 | chr1 | 33325019 | 33328869 | FALSE | ALL_ZERO | 477.5 | NA | NA | NA | NA | NA | 470.3 | 442.1 | 427.1 | 606.6 | 400.5 | 518.2 |
N043 | chr1 | 33327427 | 33328869 | TRUE | OK | 25.2 | 0.0362 | 0.7728 | 0.9421 | -0.064 | -0.032 | 19.7 | 26.1 | 23.2 | 38.7 | 19.6 | 24.2 |
N044 | chr1 | 33329146 | 33330070 | FALSE | ALL_ZERO | 749.2 | NA | NA | NA | NA | NA | 701.1 | 613.1 | 733.3 | 967.0 | 720.7 | 759.9 |
N045 | chr1 | 33330212 | 33331347 | FALSE | ALL_ZERO | 652.8 | NA | NA | NA | NA | NA | 666.5 | 593.3 | 653.7 | 850.8 | 529.8 | 622.6 |
N046 | chr1 | 33331462 | 33331624 | TRUE | OK | 28.4 | 0.00861 | 0.2684 | 0.7818 | 0.312 | 0.156 | 25.6 | 12.5 | 30.2 | 37.7 | 38.2 | 26.1 |
N047 | chr1 | 33331462 | 33332274 | FALSE | ALL_ZERO | 410.8 | NA | NA | NA | NA | NA | 391.4 | 357.7 | 416.0 | 547.0 | 347.6 | 405.1 |
N048 | chr1 | 33331699 | 33332274 | TRUE | OK | 28.3 | 0.00787 | 0.8839 | 0.972 | -0.041 | -0.020 | 24.7 | 19.8 | 32.2 | 34.7 | 36.2 | 22.2 |
N049 | chr1 | 33332404 | 33334089 | FALSE | ALL_ZERO | 333.6 | NA | NA | NA | NA | NA | 304.7 | 309.7 | 387.8 | 423.9 | 302.6 | 272.6 |
N050 | chr1 | 33332404 | 33334184 | TRUE | OK | 88.1 | 0.175 | 0.3457 | 0.8058 | -0.474 | -0.236 | 75.9 | 93.8 | 85.6 | 128.1 | 67.6 | 77.3 |
N051 | chr1 | 33334292 | 33335165 | TRUE | OK | 21.5 | 0.00588 | 5.694e-06 | 0.003503 | -1.389 | -0.694 | 29.6 | 21.9 | 32.2 | 13.9 | 16.6 | 14.5 |
N052 | chr1 | 33334292 | 33349596 | TRUE | OK | 205.1 | 5.23 | 0.7203 | 0.9262 | -28.828 | -5.613 | 228.8 | 211.7 | 201.4 | 286.9 | 240.9 | 60.9 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000225313.5 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |