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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 135033279 | 135033381 | TRUE | OK | 46.1 | 0.0144 | 0.9648 | 0.9918 | -0.014 | -0.007 | 47.3 | 40.7 | 59.4 | 34.7 | 48.0 | 46.4 |
E002 | chr5 | 135033381 | 135033441 | TRUE | OK | 70.2 | 0.00787 | 0.555 | 0.8732 | -0.123 | -0.061 | 74.9 | 67.8 | 89.6 | 56.6 | 66.6 | 65.7 |
E003 | chr5 | 135033441 | 135033540 | TRUE | OK | 84.1 | 0.0168 | 0.6908 | 0.917 | -0.114 | -0.057 | 90.7 | 70.9 | 115.8 | 68.5 | 77.4 | 81.2 |
E004 | chr5 | 135052453 | 135052522 | TRUE | OK | 13.2 | 0.0479 | 0.7518 | 0.9357 | 0.135 | 0.068 | 13.8 | 6.3 | 20.1 | 15.9 | 8.8 | 14.5 |
E005 | chr5 | 135074416 | 135074528 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.8 | 0.0841 | 0.1166 | NA | NA | NA | 3.0 | 1.0 | 8.1 | 6.0 | 5.9 | 10.6 |
E006 | chr5 | 135075299 | 135075388 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0675 | 0.03751 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 2.0 | 3.9 | 4.8 |
E007 | chr5 | 135128154 | 135128363 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.215 | 0.9946 | NA | NA | NA | 3.0 | 1.0 | 4.0 | 2.0 | 5.9 | 0.0 |
E008 | chr5 | 135147082 | 135147200 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.395 | 0.957 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
E009 | chr5 | 135174041 | 135174172 | TRUE | OK | 11.3 | 0.0371 | 0.4777 | 0.8487 | -0.294 | -0.147 | 13.8 | 12.5 | 13.1 | 16.9 | 4.9 | 6.8 |
E010 | chr5 | 135215415 | 135215565 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.312 | 0.1951 | NA | NA | NA | 3.0 | 0.0 | 0.0 | 1.0 | 2.0 | 5.8 |
E011 | chr5 | 135296494 | 135296589 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.11 | 0.08251 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 6.0 | 1.0 | 2.9 |
E012 | chr5 | 135333757 | 135334161 | TRUE | OK | 29.2 | 0.0189 | 0.2056 | 0.7599 | 0.393 | 0.196 | 18.7 | 35.5 | 27.2 | 26.8 | 39.2 | 28.0 |
E013 | chr5 | 135337930 | 135337934 | TRUE | OK | 16.1 | 0.0568 | 0.6203 | 0.8946 | 0.276 | 0.138 | 9.9 | 18.8 | 18.1 | 9.9 | 26.4 | 13.5 |
E014 | chr5 | 135337934 | 135337938 | TRUE | OK | 16.1 | 0.0561 | 0.5215 | 0.8627 | 0.336 | 0.168 | 8.9 | 18.8 | 18.1 | 10.9 | 26.4 | 13.5 |
E015 | chr5 | 135337938 | 135337973 | TRUE | OK | 19.4 | 0.0285 | 0.2517 | 0.7757 | 0.452 | 0.226 | 12.8 | 18.8 | 21.2 | 13.9 | 28.4 | 21.3 |
E016 | chr5 | 135337973 | 135338013 | TRUE | OK | 18.5 | 0.0275 | 0.267 | 0.7812 | 0.441 | 0.221 | 18.7 | 18.8 | 13.1 | 12.9 | 27.4 | 20.3 |
E017 | chr5 | 135343154 | 135344685 | TRUE | OK | 7118.9 | 0.0174 | 0.2557 | 0.7776 | -0.239 | -0.118 | 7240.3 | 8336.5 | 7318.5 | 7004.1 | 6149.9 | 6664.4 |
E018 | chr5 | 135350695 | 135350922 | TRUE | OK | 555.4 | 0.00371 | 0.2099 | 0.7612 | 0.142 | 0.071 | 577.8 | 537.0 | 577.1 | 540.1 | 555.3 | 545.3 |
E019 | chr5 | 135355048 | 135355564 | TRUE | OK | 130.4 | 0.0285 | 0.3943 | 0.8221 | 0.223 | 0.111 | 158.7 | 82.4 | 144.0 | 145.9 | 130.2 | 120.9 |
E020 | chr5 | 135355564 | 135358219 | TRUE | OK | 396.6 | 0.0509 | 0.2927 | 0.7895 | 0.324 | 0.162 | 445.7 | 203.3 | 486.5 | 454.7 | 399.5 | 389.6 |
J021 | chr5 | 135033540 | 135052453 | TRUE | OK | 10.9 | 0.117 | 0.928 | 0.9831 | -0.037 | -0.018 | 11.8 | 3.1 | 20.1 | 12.9 | 5.9 | 11.6 |
J022 | chr5 | 135052522 | 135074416 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.123 | 0.2576 | NA | NA | NA | 2.0 | 1.0 | 8.1 | 4.0 | 4.9 | 8.7 |
J023 | chr5 | 135052522 | 135174041 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.105 | 0.6808 | NA | NA | NA | 3.9 | 3.1 | 6.0 | 10.9 | 2.9 | 1.9 |
J024 | chr5 | 135074528 | 135075299 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.124 | 0.02151 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 2.9 |
J025 | chr5 | 135074528 | 135174041 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.164 | 0.02636 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 2.9 |
J026 | chr5 | 135075388 | 135147082 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J027 | chr5 | 135128363 | 135174041 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.0998 | 0.142 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 1.0 | 0.0 | 0.0 |
J028 | chr5 | 135174172 | 135215415 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.201 | 0.8557 | NA | NA | NA | 3.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 |
J029 | chr5 | 135174172 | 135296494 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.538 | 0.5979 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J030 | chr5 | 135174172 | 135333757 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.653 | 0.401 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J031 | chr5 | 135296589 | 135337934 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J032 | chr5 | 135334161 | 135337930 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.0509 | 0.04985 | NA | NA | NA | 1.0 | 2.1 | 0.0 | 2.0 | 4.9 | 2.9 |
J033 | chr5 | 135338013 | 135343154 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.8 | 0.0555 | 0.5316 | NA | NA | NA | 6.9 | 12.5 | 5.0 | 4.0 | 2.9 | 9.7 |
J034 | chr5 | 135338013 | 135355048 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.565 | 0.5255 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J035 | chr5 | 135350922 | 135355048 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.129 | 0.2439 | NA | NA | NA | 2.0 | 0.0 | 2.0 | 0.0 | 1.0 | 0.0 |
N036 | chr5 | 135031508 | 135033712 | TRUE | OK | 187.9 | 0.00709 | 0.1779 | 0.7481 | -0.219 | -0.110 | 186.4 | 245.0 | 208.5 | 196.6 | 157.7 | 133.4 |
N037 | chr5 | 135335141 | 135339427 | TRUE | OK | 39.2 | 0.0129 | 0.1155 | 0.7126 | -0.432 | -0.216 | 45.4 | 62.6 | 34.2 | 37.7 | 24.5 | 30.9 |
N038 | chr5 | 135335141 | 135343259 | TRUE | OK | 3511.8 | 0.00308 | 0.05783 | 0.6434 | -0.183 | -0.091 | 3675.8 | 4267.9 | 3616.9 | 3433.1 | 2855.6 | 3221.5 |
N039 | chr5 | 135335141 | 135345967 | TRUE | OK | 16.8 | 0.00682 | 0.9682 | 0.9925 | -0.012 | -0.006 | 19.7 | 19.8 | 14.1 | 17.9 | 13.7 | 15.5 |
N040 | chr5 | 135339575 | 135343259 | TRUE | OK | 57.2 | 0.00314 | 0.4744 | 0.8476 | 0.132 | 0.066 | 53.2 | 64.6 | 56.4 | 67.5 | 51.9 | 49.3 |
N041 | chr5 | 135343434 | 135345967 | TRUE | OK | 3954.8 | 0.00304 | 0.982 | 0.9957 | -0.001 | -0.000 | 3950.0 | 4658.9 | 3986.6 | 3866.9 | 3420.6 | 3846.1 |
N042 | chr5 | 135346057 | 135350822 | TRUE | OK | 322.7 | 0.00424 | 0.09244 | 0.691 | 0.213 | 0.107 | 336.2 | 288.8 | 333.4 | 327.6 | 322.2 | 327.8 |
N043 | chr5 | 135346057 | 135350826 | TRUE | OK | 18.3 | 0.0137 | 0.1188 | 0.7149 | 0.524 | 0.262 | 20.7 | 16.7 | 11.1 | 15.9 | 21.5 | 24.2 |
N044 | chr5 | 135346057 | 135352945 | TRUE | OK | 3138.6 | 0.00212 | 7.455e-07 | 0.0006545 | 0.400 | 0.200 | 3038.9 | 3149.0 | 3004.5 | 3230.5 | 3159.2 | 3249.5 |
N045 | chr5 | 135346057 | 135360496 | TRUE | OK | 25.9 | 0.0119 | 0.5664 | 0.877 | -0.168 | -0.084 | 27.6 | 32.3 | 27.2 | 14.9 | 28.4 | 25.1 |
N046 | chr5 | 135346057 | 135388921 | TRUE | OK | 20.8 | 0.00692 | 0.1692 | 0.744 | -0.407 | -0.204 | 27.6 | 29.2 | 18.1 | 17.9 | 13.7 | 18.4 |
N047 | chr5 | 135350913 | 135360496 | TRUE | OK | 368.0 | 0.00174 | 0.05184 | 0.6298 | 0.182 | 0.091 | 376.7 | 360.8 | 367.6 | 363.4 | 363.3 | 376.1 |
N048 | chr5 | 135353045 | 135360496 | TRUE | OK | 3645.6 | 0.00546 | 0.01496 | 0.4476 | 0.301 | 0.150 | 3532.9 | 3813.2 | 3634.1 | 3590.9 | 3728.1 | 3574.4 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000224186.8 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |