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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr14 | 23938730 | 23939612 | TRUE | OK | 264.6 | 0.00286 | 0.6286 | 0.8973 | -0.056 | -0.028 | 267.2 | 307.6 | 263.9 | 278.0 | 243.8 | 227.2 |
E002 | chr14 | 23939612 | 23940215 | TRUE | OK | 438.6 | 0.00487 | 0.6199 | 0.8945 | -0.063 | -0.031 | 485.1 | 447.3 | 457.3 | 442.8 | 418.2 | 380.9 |
E003 | chr14 | 23940215 | 23940362 | TRUE | OK | 149.2 | 0.00573 | 0.5527 | 0.8726 | 0.096 | 0.048 | 165.6 | 132.4 | 153.1 | 151.9 | 148.9 | 143.1 |
E004 | chr14 | 23940362 | 23940685 | TRUE | OK | 218.0 | 0.00886 | 0.7944 | 0.9483 | -0.047 | -0.024 | 248.5 | 196.0 | 244.8 | 205.5 | 197.8 | 215.6 |
E005 | chr14 | 23940685 | 23941158 | TRUE | OK | 293.3 | 0.0125 | 0.1736 | 0.7455 | 0.267 | 0.134 | 343.1 | 241.9 | 259.9 | 328.6 | 274.2 | 312.3 |
E006 | chr14 | 23952989 | 23953308 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.4 | 0.1 | 0.09871 | NA | NA | NA | 3.9 | 0.0 | 4.0 | 4.0 | 9.8 | 4.8 |
E007 | chr14 | 23953308 | 23953369 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.107 | 0.245 | NA | NA | NA | 4.9 | 2.1 | 3.0 | 4.0 | 11.8 | 2.9 |
E008 | chr14 | 23953369 | 23953419 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.1 | 0.149 | 0.09953 | NA | NA | NA | 3.0 | 1.0 | 4.0 | 5.0 | 14.7 | 2.9 |
E009 | chr14 | 23953573 | 23953773 | TRUE | OK | 167.9 | 0.00981 | 0.3483 | 0.8068 | 0.189 | 0.094 | 157.8 | 154.3 | 181.3 | 174.7 | 140.0 | 199.2 |
E010 | chr14 | 23953773 | 23953852 | TRUE | OK | 932.5 | 0.00448 | 0.8714 | 0.9688 | -0.023 | -0.012 | 928.8 | 1099.0 | 892.4 | 909.4 | 821.6 | 943.6 |
E011 | chr14 | 23953852 | 23954033 | TRUE | OK | 1051.7 | 0.00795 | 0.6866 | 0.9156 | 0.058 | 0.029 | 1032.4 | 1242.9 | 975.0 | 1025.6 | 943.0 | 1091.6 |
E012 | chr14 | 23954033 | 23954122 | TRUE | OK | 29.9 | 0.0406 | 0.1032 | 0.7012 | 0.616 | 0.308 | 39.4 | 15.6 | 19.1 | 42.7 | 28.4 | 33.8 |
E013 | chr14 | 23954122 | 23954124 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.0367 | 0.2362 | NA | NA | NA | 3.9 | 3.1 | 2.0 | 3.0 | 5.9 | 5.8 |
E014 | chr14 | 23954124 | 23954166 | TRUE | OK | 27.5 | 0.0081 | 2.082e-05 | 0.009863 | 1.189 | 0.595 | 21.7 | 15.6 | 16.1 | 41.7 | 29.4 | 40.6 |
E015 | chr14 | 23954166 | 23954197 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.0806 | 0.8858 | NA | NA | NA | 3.0 | 0.0 | 4.0 | 2.0 | 2.0 | 1.9 |
E016 | chr14 | 23988728 | 23988839 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.383 | 0.2734 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J017 | chr14 | 23941158 | 23953308 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.115 | 0.6531 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 2.0 | 1.0 | 0.0 |
J018 | chr14 | 23941158 | 23953573 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.107 | 0.06082 | NA | NA | NA | 9.9 | 1.0 | 2.0 | 9.9 | 8.8 | 9.7 |
J019 | chr14 | 23941158 | 23953773 | TRUE | OK | 65.8 | 0.0324 | 0.02194 | 0.5062 | 0.754 | 0.377 | 73.0 | 34.4 | 48.3 | 96.3 | 62.7 | 80.2 |
J020 | chr14 | 23941158 | 23988728 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J021 | chr14 | 23953419 | 23953773 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.242 | 0.1117 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 3.9 | 1.9 |
J022 | chr14 | 23954033 | 23954124 | TRUE | OK | 19.3 | 0.0124 | 0.0001233 | 0.03594 | 1.308 | 0.654 | 13.8 | 11.5 | 10.1 | 29.8 | 17.6 | 32.9 |
N023 | chr14 | 23941158 | 23954747 | TRUE | OK | 14.6 | 0.0634 | 0.9376 | 0.9853 | 0.010 | 0.005 | 19.7 | 9.4 | 16.1 | 23.8 | 9.8 | 8.7 |
N024 | chr14 | 23953916 | 23955034 | TRUE | OK | 886.9 | 0.0142 | 0.6608 | 0.9077 | -0.102 | -0.051 | 850.9 | 1133.4 | 834.0 | 812.1 | 777.5 | 913.7 |
N025 | chr14 | 23955212 | 23959901 | TRUE | OK | 372.8 | 0.0107 | 0.7813 | 0.9449 | -0.053 | -0.026 | 370.7 | 472.4 | 336.4 | 356.4 | 291.8 | 409.0 |
N026 | chr14 | 23955212 | 23965761 | TRUE | OK | 17.4 | 0.0105 | 0.6872 | 0.9158 | -0.126 | -0.063 | 20.7 | 18.8 | 17.1 | 15.9 | 9.8 | 22.2 |
N027 | chr14 | 23955212 | 23967210 | TRUE | OK | 12.0 | 0.0518 | 0.9104 | 0.9787 | -0.096 | -0.048 | 11.8 | 20.9 | 6.0 | 14.9 | 11.8 | 6.8 |
N028 | chr14 | 23960003 | 23965761 | TRUE | OK | 215.2 | 0.00843 | 0.9578 | 0.9902 | -0.020 | -0.010 | 245.5 | 259.6 | 170.2 | 214.4 | 181.2 | 220.4 |
N029 | chr14 | 23960003 | 23966282 | TRUE | OK | 51.7 | 0.00338 | 0.6302 | 0.8977 | -0.093 | -0.047 | 47.3 | 66.7 | 52.4 | 50.6 | 47.0 | 46.4 |
N030 | chr14 | 23960003 | 23967210 | TRUE | OK | 180.2 | 0.0133 | 0.3516 | 0.8079 | -0.220 | -0.110 | 169.6 | 263.8 | 166.2 | 150.9 | 148.9 | 181.8 |
N031 | chr14 | 23965832 | 23965931 | TRUE | OK | 223.1 | 0.00266 | 0.1085 | 0.7061 | -0.195 | -0.097 | 229.7 | 287.8 | 218.6 | 217.4 | 181.2 | 204.0 |
N032 | chr14 | 23965983 | 23966282 | TRUE | OK | 265.5 | 0.00326 | 0.7119 | 0.9236 | -0.047 | -0.024 | 249.5 | 326.4 | 263.9 | 266.1 | 226.2 | 261.0 |
N033 | chr14 | 23966417 | 23967210 | TRUE | OK | 215.3 | 0.00194 | 0.5501 | 0.8719 | -0.068 | -0.034 | 205.1 | 257.6 | 222.6 | 212.5 | 197.8 | 196.3 |
N034 | chr14 | 23967266 | 23968756 | TRUE | OK | 240.3 | 0.0155 | 0.2069 | 0.7603 | -0.298 | -0.149 | 238.6 | 350.4 | 225.6 | 227.3 | 177.2 | 222.4 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000215256.3 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |