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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
| E001 | chr12 | 103940762 | 103942093 | TRUE | OK | 17285.4 | 0.00576 | 0.0004671 | 0.08503 | 0.491 | 0.230 | 17529.3 | 17769.0 | 16782.3 | 17356.9 | 16226.7 | 18047.9 |
| E002 | chr12 | 103950193 | 103950201 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.178 | 0.9567 | NA | NA | NA | 3.9 | 0.0 | 1.0 | 3.0 | 1.0 | 1.0 |
| E003 | chr12 | 103950201 | 103950739 | TRUE | OK | 14.5 | 0.0102 | 0.1394 | 0.7293 | -0.523 | -0.262 | 16.8 | 16.7 | 18.1 | 11.9 | 10.8 | 12.6 |
| E004 | chr12 | 103950739 | 103950744 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.5 | 0.0545 | 0.1437 | NA | NA | NA | 3.0 | 8.3 | 7.1 | 1.0 | 4.9 | 2.9 |
| E005 | chr12 | 103950744 | 103950873 | TRUE | OK | 22.4 | 0.0402 | 0.01479 | 0.4462 | -1.061 | -0.531 | 22.7 | 44.8 | 24.2 | 7.9 | 17.6 | 17.4 |
| E006 | chr12 | 103950873 | 103951127 | TRUE | OK | 47.9 | 0.0384 | 0.1827 | 0.7501 | -0.527 | -0.264 | 49.3 | 83.4 | 38.3 | 25.8 | 46.0 | 44.5 |
| E007 | chr12 | 103951127 | 103951261 | TRUE | OK | 57.4 | 0.0164 | 0.05908 | 0.646 | -0.489 | -0.244 | 63.1 | 77.2 | 62.4 | 30.8 | 55.8 | 55.1 |
| E008 | chr12 | 103951261 | 103951281 | TRUE | OK | 50.2 | 0.018 | 0.02206 | 0.507 | -0.639 | -0.319 | 52.3 | 75.1 | 57.4 | 25.8 | 46.0 | 44.5 |
| E009 | chr12 | 103951281 | 103951405 | TRUE | OK | 128.0 | 0.0108 | 6.804e-05 | 0.0238 | -0.820 | -0.410 | 133.1 | 193.9 | 166.2 | 78.4 | 100.9 | 95.7 |
| E010 | chr12 | 103951405 | 103951409 | TRUE | OK | 102.5 | 0.00993 | 5.465e-05 | 0.02019 | -0.838 | -0.419 | 103.5 | 157.5 | 136.0 | 66.5 | 75.4 | 76.4 |
| E011 | chr12 | 103951409 | 103951419 | TRUE | OK | 104.7 | 0.00825 | 2.119e-05 | 0.009988 | -0.825 | -0.413 | 109.4 | 159.5 | 135.0 | 66.5 | 76.4 | 81.2 |
| E012 | chr12 | 103951419 | 103951479 | TRUE | OK | 117.2 | 0.00644 | 8.35e-06 | 0.004764 | -0.784 | -0.392 | 125.2 | 180.4 | 142.0 | 85.4 | 80.3 | 89.9 |
| E013 | chr12 | 103951479 | 103951583 | TRUE | OK | 180.1 | 0.00574 | 1.251e-06 | 0.001008 | -0.759 | -0.380 | 202.1 | 273.2 | 207.5 | 142.0 | 118.5 | 137.3 |
| E014 | chr12 | 103951583 | 103951630 | TRUE | OK | 153.2 | 0.00546 | 0.001396 | 0.1587 | -0.500 | -0.250 | 178.5 | 207.5 | 156.1 | 144.0 | 103.8 | 129.6 |
| E015 | chr12 | 103953413 | 103953534 | TRUE | OK | 110.5 | 0.00955 | 0.002068 | 0.1938 | -0.628 | -0.314 | 116.3 | 172.0 | 116.8 | 86.4 | 88.1 | 83.1 |
| E016 | chr12 | 103954651 | 103954874 | TRUE | OK | 13.0 | 0.0265 | 0.5485 | 0.8715 | 0.238 | 0.119 | 18.7 | 9.4 | 8.1 | 10.9 | 15.7 | 15.5 |
| E017 | chr12 | 103954874 | 103954968 | TRUE | OK | 15.4 | 0.0158 | 0.1832 | 0.7504 | -0.490 | -0.245 | 23.7 | 17.7 | 13.1 | 9.9 | 10.8 | 17.4 |
| E018 | chr12 | 103955705 | 103955771 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.8 | 0.0309 | 0.3468 | NA | NA | NA | 11.8 | 7.3 | 5.0 | 3.0 | 6.9 | 6.8 |
| E019 | chr12 | 103956303 | 103956630 | TRUE | OK | 14.3 | 0.0262 | 0.02859 | 0.5457 | 0.909 | 0.454 | 14.8 | 5.2 | 10.1 | 14.9 | 22.5 | 18.4 |
| E020 | chr12 | 103956630 | 103956738 | TRUE | OK | 198.6 | 0.0079 | 0.001542 | 0.1671 | -0.550 | -0.275 | 214.9 | 292.0 | 205.5 | 178.7 | 142.0 | 158.6 |
| E021 | chr12 | 103956738 | 103956748 | TRUE | OK | 150.3 | 0.00602 | 0.006774 | 0.3351 | -0.444 | -0.222 | 163.7 | 210.6 | 149.1 | 139.0 | 113.6 | 125.7 |
| E022 | chr12 | 103956748 | 103957068 | TRUE | OK | 46.9 | 0.0138 | 0.4804 | 0.8496 | -0.188 | -0.094 | 39.4 | 66.7 | 45.3 | 41.7 | 35.3 | 53.2 |
| E023 | chr12 | 103957068 | 103957134 | TRUE | OK | 129.8 | 0.00971 | 0.006712 | 0.3337 | -0.535 | -0.268 | 142.0 | 189.8 | 131.9 | 124.1 | 95.0 | 95.7 |
| E024 | chr12 | 103957134 | 103957139 | TRUE | OK | 72.5 | 0.0072 | 0.001683 | 0.1747 | -0.636 | -0.318 | 97.6 | 102.2 | 66.5 | 54.6 | 55.8 | 58.0 |
| E025 | chr12 | 103957139 | 103957147 | TRUE | OK | 73.4 | 0.00693 | 0.00104 | 0.1348 | -0.655 | -0.327 | 101.6 | 101.1 | 68.5 | 53.6 | 56.8 | 59.0 |
| E026 | chr12 | 103957147 | 103957181 | TRUE | OK | 68.6 | 0.00948 | 0.001428 | 0.1606 | -0.708 | -0.354 | 97.6 | 97.0 | 62.4 | 49.6 | 53.9 | 51.2 |
| E027 | chr12 | 103957181 | 103957190 | TRUE | OK | 23.8 | 0.0544 | 0.4886 | 0.8523 | -0.410 | -0.205 | 30.6 | 40.7 | 11.1 | 19.9 | 22.5 | 18.4 |
| E028 | chr12 | 103957190 | 103957213 | TRUE | OK | 17.7 | 0.0462 | 0.5299 | 0.8653 | -0.350 | -0.175 | 23.7 | 28.2 | 8.1 | 15.9 | 16.6 | 13.5 |
| E029 | chr12 | 103957213 | 103957215 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.365 | 0.5453 | NA | NA | NA | 3.9 | 1.0 | 1.0 | 0.0 | 0.0 | 3.9 |
| E030 | chr12 | 103957215 | 103957273 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.431 | 0.6321 | NA | NA | NA | 3.9 | 1.0 | 1.0 | 0.0 | 0.0 | 4.8 |
| E031 | chr12 | 103965515 | 103965695 | TRUE | OK | 24.7 | 0.00779 | 0.8875 | 0.973 | -0.040 | -0.020 | 23.7 | 26.1 | 26.2 | 21.8 | 28.4 | 22.2 |
| E032 | chr12 | 103965695 | 103965708 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.0763 | 0.626 | NA | NA | NA | 3.0 | 1.0 | 7.1 | 6.0 | 4.9 | 2.9 |
| J033 | chr12 | 103942093 | 103950873 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J034 | chr12 | 103951127 | 103951261 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J035 | chr12 | 103951630 | 103953413 | TRUE | OK | 46.3 | 0.00689 | 0.000567 | 0.09542 | -0.780 | -0.390 | 55.2 | 74.0 | 47.3 | 37.7 | 28.4 | 34.8 |
| J036 | chr12 | 103951630 | 103956630 | TRUE | OK | 74.1 | 0.0128 | 0.0232 | 0.5144 | -0.513 | -0.256 | 84.8 | 93.8 | 84.6 | 80.4 | 41.1 | 59.9 |
| J037 | chr12 | 103953534 | 103954874 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0234 | 0.3063 | NA | NA | NA | 6.9 | 8.3 | 3.0 | 3.0 | 2.9 | 5.8 |
| J038 | chr12 | 103953534 | 103956630 | TRUE | OK | 49.7 | 0.0171 | 0.0009573 | 0.1288 | -0.939 | -0.469 | 55.2 | 87.6 | 54.4 | 39.7 | 34.3 | 27.1 |
| J039 | chr12 | 103953534 | 103965515 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J040 | chr12 | 103954968 | 103955705 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.631 | 0.3604 | NA | NA | NA | 0.0 | 2.1 | 0.0 | 0.0 | 0.0 | 0.0 |
| J041 | chr12 | 103954968 | 103956630 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.7 | 0.0275 | 0.06167 | NA | NA | NA | 9.9 | 8.3 | 5.0 | 2.0 | 2.0 | 6.8 |
| J042 | chr12 | 103955771 | 103956630 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.169 | 0.05487 | NA | NA | NA | 0.0 | 2.1 | 2.0 | 0.0 | 0.0 | 0.0 |
| J043 | chr12 | 103956748 | 103957068 | TRUE | OK | 114.0 | 0.0136 | 0.01794 | 0.4754 | -0.542 | -0.271 | 124.2 | 173.1 | 110.8 | 111.2 | 83.2 | 81.2 |
| J044 | chr12 | 103956748 | 103957139 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.2 | 0.0236 | 0.0375 | NA | NA | NA | 6.9 | 4.2 | 7.1 | 2.0 | 2.9 | 1.9 |
| J045 | chr12 | 103956748 | 103965515 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.1 | 0.03 | 0.6126 | NA | NA | NA | 5.9 | 3.1 | 8.1 | 2.0 | 5.9 | 5.8 |
| N046 | chr12 | 103939625 | 103941409 | TRUE | OK | 9724.5 | 0.00152 | 0.04484 | 0.6101 | 0.138 | 0.069 | 9822.6 | 9679.6 | 9303.7 | 9812.7 | 9119.1 | 10609.1 |
| N047 | chr12 | 103941547 | 103941628 | TRUE | OK | 5871.1 | 0.000453 | 0.6649 | 0.9089 | 0.018 | 0.009 | 5858.9 | 6200.0 | 5643.5 | 5855.5 | 5466.3 | 6202.3 |
| N048 | chr12 | 103941706 | 103941831 | TRUE | OK | 4745.4 | 0.00031 | 0.9116 | 0.9791 | -0.004 | -0.002 | 4781.2 | 5027.0 | 4572.8 | 4733.6 | 4406.8 | 4951.2 |
| N049 | chr12 | 103941897 | 103942526 | TRUE | OK | 5396.0 | 0.000551 | 0.1278 | 0.7221 | -0.065 | -0.033 | 5614.3 | 5655.7 | 5319.1 | 5427.6 | 4833.7 | 5525.5 |
| N050 | chr12 | 103942796 | 103943073 | TRUE | OK | 5535.5 | 0.00309 | 0.4046 | 0.8254 | -0.080 | -0.040 | 5477.3 | 6302.2 | 5297.0 | 5520.9 | 4907.2 | 5708.2 |
| N051 | chr12 | 103943319 | 103943533 | TRUE | OK | 14.0 | 0.037 | 0.8034 | 0.9509 | 0.086 | 0.043 | 21.7 | 7.3 | 12.1 | 14.9 | 10.8 | 17.4 |
| N052 | chr12 | 103943319 | 103943737 | TRUE | OK | 8117.4 | 0.000909 | 0.3651 | 0.8121 | 0.047 | 0.024 | 8040.9 | 8617.0 | 7698.2 | 8222.3 | 7610.0 | 8515.9 |
| N053 | chr12 | 103943573 | 103943737 | TRUE | OK | 18.4 | 0.00775 | 0.8804 | 0.9712 | -0.046 | -0.023 | 23.7 | 14.6 | 18.1 | 15.9 | 15.7 | 22.2 |
| N054 | chr12 | 103943874 | 103946617 | TRUE | OK | 8783.6 | 0.00259 | 0.9439 | 0.9867 | -0.007 | -0.004 | 9081.1 | 9431.4 | 8111.2 | 8735.6 | 8080.0 | 9262.3 |
| N055 | chr12 | 103946696 | 103946785 | TRUE | OK | 8422.3 | 0.0185 | 0.08807 | 0.6869 | -0.396 | -0.198 | 8449.1 | 10887.0 | 7983.2 | 7821.2 | 7321.1 | 8072.1 |
| N056 | chr12 | 103946941 | 103947310 | TRUE | OK | 8037.2 | 0.0368 | 0.6952 | 0.9184 | -0.142 | -0.071 | 7088.4 | 10768.2 | 7126.1 | 7448.9 | 7482.7 | 8309.0 |
| N057 | chr12 | 103947430 | 103947632 | TRUE | OK | 11247.8 | 0.314 | 0.1889 | 0.7531 | -1.014 | -0.505 | 10324.5 | 17577.1 | 10458.0 | 10167.2 | 8559.9 | 10400.3 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000204954.10 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |