<<

< Prev Gene

TOP

Next Gene >

>>

Normalized Counts Table (ENSG00000198730.9)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr11	10751245	10751451	TRUE	OK	415.9	0.0323	0.3261	0.7998	0.238	0.119	505.8	232.5	457.3	446.8	387.8	465.0
E002	chr11	10751451	10751457	TRUE	OK	264.5	0.0363	0.1707	0.7444	0.378	0.189	319.5	133.5	268.9	305.8	249.7	309.4
E003	chr11	10752671	10752770	TRUE	OK	395.8	0.0387	0.2407	0.7726	0.314	0.157	489.1	202.3	417.0	451.7	379.0	436.0
E004	chr11	10754957	10755197	TRUE	OK	663.4	0.0241	0.3516	0.8079	0.199	0.099	822.3	421.3	694.0	695.9	628.7	718.4
E005	chr11	10755677	10755795	TRUE	OK	493.1	0.0206	0.5414	0.8693	0.112	0.056	620.2	332.6	525.8	517.2	440.7	522.1
E006	chr11	10756748	10756838	TRUE	OK	338.1	0.0261	0.4162	0.8291	0.175	0.088	434.8	208.5	348.5	382.2	310.4	344.2
E007	chr11	10760172	10760321	TRUE	OK	420.5	0.0309	0.5011	0.8559	0.135	0.067	561.0	250.3	440.2	450.7	402.5	418.6
E008	chr11	10761946	10762054	TRUE	OK	331.1	0.0258	0.3892	0.82	0.183	0.092	426.9	202.3	339.4	360.4	315.3	342.3
E009	chr11	10763430	10763538	TRUE	OK	364.6	0.0192	0.3317	0.8013	0.194	0.097	449.6	238.8	374.7	389.2	346.7	388.7
E010	chr11	10763642	10763734	TRUE	OK	331.7	0.0122	0.2693	0.7822	0.196	0.098	375.7	235.7	354.5	372.3	321.2	330.7
E011	chr11	10763734	10763879	TRUE	OK	460.5	0.0132	0.5082	0.8586	0.113	0.057	487.1	344.1	548.9	510.3	421.1	451.5
E012	chr11	10764111	10764201	TRUE	OK	443.6	0.0182	0.2961	0.7907	0.218	0.109	463.4	301.3	519.7	523.2	416.2	438.0
E013	chr11	10764307	10764436	TRUE	OK	534.9	0.0128	0.1788	0.7483	0.245	0.122	579.8	379.5	577.1	614.5	518.0	540.5
E014	chr11	10764547	10764731	TRUE	OK	625.0	0.0113	0.2746	0.7831	0.180	0.090	696.1	457.8	681.9	650.3	620.9	642.9
E015	chr11	10766333	10766401	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.126	0.1346	NA	NA	NA	2.0	1.0	2.0	1.0	0.0	0.0
E016	chr11	10766401	10766490	TRUE	OK	463.8	0.0123	0.3545	0.8089	0.158	0.079	518.6	338.9	512.7	475.5	491.6	445.7
E017	chr11	10767050	10767805	TRUE	OK	25.7	0.0486	0.05533	0.6383	-0.791	-0.396	34.5	35.5	30.2	21.8	25.5	6.8
E018	chr11	10767805	10767991	TRUE	OK	680.6	0.00464	0.3427	0.8048	0.110	0.055	723.7	576.6	744.3	692.0	685.5	661.3
E019	chr11	10768073	10768161	TRUE	OK	558.2	0.00507	0.379	0.8165	0.106	0.053	601.5	465.1	611.4	561.9	563.1	546.3
E020	chr11	10768342	10768459	TRUE	OK	619.8	0.0012	0.1294	0.7229	0.115	0.057	633.0	580.8	644.6	641.3	586.6	632.3
E021	chr11	10768459	10768476	TRUE	OK	419.9	0.00219	0.05374	0.6344	0.191	0.096	411.2	396.2	419.0	447.7	380.9	464.1
E022	chr11	10768476	10768491	TRUE	OK	408.9	0.00223	0.08531	0.6839	0.172	0.086	410.2	381.6	409.9	432.9	368.2	450.5
E023	chr11	10770209	10770326	TRUE	OK	653.8	0.00145	0.8338	0.9589	0.018	0.009	692.2	652.7	675.8	650.3	577.8	673.9
E024	chr11	10770486	10770632	TRUE	OK	711.8	0.00136	0.5964	0.8868	-0.041	-0.021	799.7	715.3	724.2	704.9	633.6	693.2
E025	chr11	10771544	10771616	TRUE	OK	527.0	0.0014	0.02534	0.5271	-0.183	-0.091	593.6	580.8	556.0	487.5	443.6	500.8
E026	chr11	10772506	10772519	FALSE	LOW_COUNTS_INDEP_FILTER	9.3	0.0926	0.6742	NA	NA	NA	9.9	6.3	9.1	9.9	17.6	2.9
E027	chr11	10772519	10772655	TRUE	OK	546.9	0.00449	0.07195	0.6658	-0.223	-0.112	574.8	669.4	572.1	473.6	473.0	518.2
E028	chr11	10773126	10773273	TRUE	OK	638.3	0.0161	0.3088	0.794	-0.233	-0.116	616.3	881.1	626.5	543.1	515.1	647.8
E029	chr11	10774011	10774169	TRUE	OK	902.6	0.0193	0.6557	0.9063	-0.125	-0.062	862.8	1233.5	810.8	775.4	810.8	922.4
E030	chr11	10774169	10774309	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.115	0.8418	NA	NA	NA	11.8	1.0	6.0	4.0	6.9	3.9
E031	chr11	10775206	10775303	TRUE	OK	978.0	0.0155	0.8302	0.9578	-0.061	-0.031	937.7	1275.2	880.3	870.7	932.3	971.7
E032	chr11	10775520	10775633	TRUE	OK	936.6	0.012	0.8219	0.9556	-0.055	-0.027	899.2	1190.8	867.2	863.7	884.3	914.6
E033	chr11	10778678	10779746	TRUE	OK	1948.3	0.0169	0.4332	0.8338	-0.181	-0.091	1905.0	2542.2	1872.4	1799.9	1750.0	1820.6
E034	chr11	10783289	10783374	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.85	0.5818	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
E035	chr11	10792094	10792302	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E036	chr11	10801454	10801625	TRUE	OK	36.3	0.0063	0.7548	0.9367	0.072	0.036	42.4	29.2	38.3	36.7	30.4	40.6
J037	chr11	10751457	10752671	TRUE	OK	251.8	0.0366	0.2141	0.763	0.343	0.172	307.6	131.4	256.8	292.9	232.1	290.1
J038	chr11	10752770	10754957	TRUE	OK	247.0	0.0412	0.173	0.7455	0.392	0.196	304.7	119.9	245.8	294.9	248.7	267.8
J039	chr11	10755197	10755677	TRUE	OK	354.3	0.0164	0.5951	0.8864	0.092	0.046	444.7	254.4	369.7	343.5	320.2	393.5
J040	chr11	10755795	10756748	TRUE	OK	250.3	0.0319	0.4695	0.846	0.164	0.082	319.5	144.9	272.0	285.9	228.2	251.4
J041	chr11	10756838	10760172	TRUE	OK	217.8	0.0254	0.4749	0.8479	0.152	0.076	287.9	137.6	217.6	244.2	194.9	224.3
J042	chr11	10760321	10761946	TRUE	OK	226.1	0.0318	0.5867	0.8836	0.100	0.050	303.7	132.4	243.7	232.3	223.3	221.4
J043	chr11	10760321	10763430	FALSE	LOW_COUNTS_INDEP_FILTER	5.0	0.0643	0.9573	NA	NA	NA	4.9	3.1	7.1	2.0	8.8	3.9
J044	chr11	10762054	10763430	TRUE	OK	238.2	0.0275	0.535	0.8671	0.124	0.062	309.6	144.9	255.8	245.2	218.4	255.2
J045	chr11	10763538	10763642	TRUE	OK	230.1	0.00973	0.08001	0.6773	0.307	0.153	257.3	163.7	222.6	266.1	216.4	254.3
J046	chr11	10763879	10764111	TRUE	OK	299.0	0.0152	0.543	0.8697	0.110	0.055	302.7	220.0	373.7	329.6	267.3	300.7
J047	chr11	10764201	10764307	TRUE	OK	309.0	0.0139	0.07941	0.6761	0.345	0.172	320.5	204.4	329.4	369.3	308.5	322.0
J048	chr11	10764436	10764547	TRUE	OK	321.1	0.00999	0.1877	0.7522	0.224	0.112	352.0	235.7	338.4	371.3	301.6	327.8
J049	chr11	10764731	10766401	TRUE	OK	311.9	0.0102	0.6141	0.8926	0.074	0.037	357.9	237.7	350.5	293.9	322.2	309.4
J050	chr11	10766490	10767805	TRUE	OK	318.4	0.00683	0.2245	0.7666	0.175	0.088	340.2	247.1	346.5	324.6	338.8	313.3
J051	chr11	10767991	10768073	TRUE	OK	395.7	0.00337	0.7317	0.93	0.034	0.017	431.9	344.1	440.2	395.1	387.8	375.1
J052	chr11	10768161	10768342	TRUE	OK	396.9	0.00232	0.07203	0.666	0.177	0.089	411.2	336.8	416.0	397.1	410.3	409.9
J053	chr11	10768491	10770209	TRUE	OK	366.6	0.00226	0.0631	0.6525	0.191	0.095	368.8	338.9	362.6	393.1	326.1	409.9
J054	chr11	10770326	10770486	TRUE	OK	439.0	0.0015	0.7782	0.9439	0.024	0.012	482.2	414.0	457.3	449.7	385.8	444.7
J055	chr11	10770632	10771544	TRUE	OK	406.3	0.000852	0.09904	0.697	-0.128	-0.064	455.5	437.9	420.0	386.2	357.4	380.9
J056	chr11	10771616	10772519	TRUE	OK	321.3	0.00239	0.07474	0.6698	-0.188	-0.094	362.9	372.3	323.3	286.9	268.3	314.2
J057	chr11	10772655	10773126	TRUE	OK	323.5	0.01	0.1811	0.7494	-0.247	-0.124	307.6	426.5	350.5	270.0	271.3	315.2
J058	chr11	10773273	10774011	TRUE	OK	361.7	0.0208	0.4582	0.8423	-0.200	-0.100	358.9	514.1	322.3	311.7	280.1	382.9
J059	chr11	10774169	10775206	TRUE	OK	625.9	0.0185	0.8252	0.9565	-0.070	-0.035	590.6	841.5	555.0	528.2	600.3	640.0
J060	chr11	10775303	10775520	TRUE	OK	696.6	0.0116	0.8814	0.9714	-0.040	-0.020	658.7	886.3	646.6	643.3	665.9	678.7
J061	chr11	10775633	10778678	TRUE	OK	612.9	0.0108	0.7622	0.939	-0.065	-0.033	582.7	782.0	578.1	570.9	552.3	611.0
J062	chr11	10775633	10783289	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.544	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J063	chr11	10783374	10792094	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J064	chr11	10792302	10801454	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N065	chr11	10797881	10798991	TRUE	OK	5934.6	2.04	0.529	0.8651	-0.873	-0.431	6077.8	7312.6	5995.0	5585.4	5244.0	5393.0
N066	chr11	10799062	10799212	TRUE	OK	13.6	0.0273	0.1302	0.7235	-0.658	-0.329	23.7	10.4	17.1	12.9	5.9	11.6
N067	chr11	10799113	10799212	TRUE	OK	5892.3	0.0265	0.7918	0.9475	-0.084	-0.041	6506.7	5892.4	5994.0	5988.5	5235.2	5737.2
N068	chr11	10799424	10799551	TRUE	OK	6373.1	0.00202	1.529e-05	0.00773	0.391	0.191	6677.3	6311.6	6593.3	6275.4	6056.8	6324.1
N069	chr11	10799609	10800089	TRUE	OK	53.9	0.00345	0.4616	0.8433	0.138	0.069	49.3	57.3	53.4	53.6	60.7	49.3
N070	chr11	10799756	10800089	TRUE	OK	6138.7	0.0264	0.2334	0.7703	-0.317	-0.156	6543.2	6109.3	6670.8	6051.1	5717.0	5741.1
N071	chr11	10799756	10800243	TRUE	OK	20.6	0.0087	0.4272	0.8322	0.245	0.122	17.7	21.9	19.1	28.8	15.7	20.3
N072	chr11	10800168	10800243	TRUE	OK	19.4	0.015	0.3404	0.8041	-0.315	-0.157	26.6	20.9	19.1	16.9	9.8	23.2
N073	chr11	10800348	10800431	TRUE	OK	6329.5	1.15	0.5587	0.8743	-0.211	-0.103	7418.7	5624.4	6758.5	6479.9	5678.8	6016.6
N074	chr11	10800647	10800730	FALSE	ALL_ZERO	8143.3	NA	NA	NA	NA	NA	8920.4	7506.5	8659.1	8274.9	7558.1	7940.6
N075	chr11	10800835	10800961	TRUE	OK	7519.0	5.99	0.2111	0.7619	33.002	5.083	8299.2	5771.5	7496.8	7906.6	7664.8	7975.4
N076	chr11	10801087	10801660	TRUE	OK	5704.8	0.0551	0.02428	0.5207	0.959	0.474	6238.5	4616.1	5862.0	5842.6	5675.9	5993.4
N077	chr11	10801087	10802048	TRUE	OK	1150.0	0.00995	0.8073	0.9519	0.027	0.013	1379.4	945.7	1221.8	1059.3	1105.6	1188.2

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000198730.9
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE