Raw Counts Table (ENSG00000183401.12)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr19 | 11344683 | 11344694 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0664 | 0.5706 | NA | NA | NA | 3.0 | 3.0 | 0.0 | 2.0 | 2.0 | 4.0 |
E002 | chr19 | 11344694 | 11344755 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0693 | 0.7428 | NA | NA | NA | 4.0 | 3.0 | 0.0 | 2.0 | 2.0 | 4.0 |
E003 | chr19 | 11345179 | 11345300 | TRUE | OK | 561.6 | 0.00246 | 0.1241 | 0.7194 | 0.163 | 0.081 | 536.0 | 622.0 | 515.0 | 574.0 | 548.0 | 587.0 |
E004 | chr19 | 11345300 | 11345381 | TRUE | OK | 881.8 | 0.00149 | 0.1597 | 0.7389 | 0.125 | 0.062 | 848.0 | 1007.0 | 815.0 | 851.0 | 873.0 | 914.0 |
E005 | chr19 | 11345961 | 11346017 | TRUE | OK | 95.5 | 0.0149 | 0.7066 | 0.9218 | 0.094 | 0.047 | 70.0 | 112.0 | 104.0 | 73.0 | 99.0 | 117.0 |
E006 | chr19 | 11346017 | 11346203 | TRUE | OK | 728.6 | 0.00489 | 0.1626 | 0.7404 | -0.176 | -0.088 | 759.0 | 879.0 | 685.0 | 658.0 | 630.0 | 772.0 |
E007 | chr19 | 11346203 | 11346298 | TRUE | OK | 527.6 | 0.00448 | 0.09166 | 0.6907 | -0.210 | -0.105 | 545.0 | 652.0 | 509.0 | 467.0 | 438.0 | 562.0 |
E008 | chr19 | 11346298 | 11346466 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.033 | 0.7096 | NA | NA | NA | 14.0 | 8.0 | 5.0 | 7.0 | 10.0 | 12.0 |
E009 | chr19 | 11346482 | 11346504 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.0616 | 0.02137 | NA | NA | NA | 2.0 | 3.0 | 0.0 | 4.0 | 9.0 | 4.0 |
E010 | chr19 | 11346504 | 11346518 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.15 | 0.9397 | NA | NA | NA | 1.0 | 2.0 | 0.0 | 2.0 | 1.0 | 0.0 |
E011 | chr19 | 11346518 | 11346530 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.378 | 0.305 | NA | NA | NA | 1.0 | 2.0 | 0.0 | 8.0 | 2.0 | 0.0 |
E012 | chr19 | 11346530 | 11346532 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.378 | 0.305 | NA | NA | NA | 1.0 | 2.0 | 0.0 | 8.0 | 2.0 | 0.0 |
E013 | chr19 | 11346532 | 11346539 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.3 | 0.0451 | 0.07384 | NA | NA | NA | 2.0 | 2.0 | 4.0 | 9.0 | 5.0 | 4.0 |
E014 | chr19 | 11346539 | 11346555 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.4 | 0.0175 | 0.004356 | NA | NA | NA | 5.0 | 7.0 | 5.0 | 11.0 | 11.0 | 18.0 |
E015 | chr19 | 11346555 | 11346564 | TRUE | OK | 15.2 | 0.0117 | 0.0002173 | 0.05247 | 1.358 | 0.679 | 6.0 | 11.0 | 10.0 | 24.0 | 18.0 | 23.0 |
E016 | chr19 | 11346564 | 11346571 | TRUE | OK | 17.3 | 0.00941 | 0.0001565 | 0.04214 | 1.282 | 0.641 | 9.0 | 12.0 | 11.0 | 26.0 | 22.0 | 25.0 |
E017 | chr19 | 11346571 | 11346580 | TRUE | OK | 19.3 | 0.00841 | 4.08e-05 | 0.01607 | 1.322 | 0.661 | 11.0 | 12.0 | 12.0 | 26.0 | 29.0 | 27.0 |
E018 | chr19 | 11346580 | 11346624 | TRUE | OK | 27.3 | 0.00665 | 5.485e-05 | 0.02024 | 1.097 | 0.548 | 19.0 | 20.0 | 16.0 | 38.0 | 37.0 | 35.0 |
E019 | chr19 | 11346624 | 11346627 | TRUE | OK | 23.3 | 0.0098 | 0.001571 | 0.169 | 0.957 | 0.478 | 19.0 | 17.0 | 14.0 | 36.0 | 27.0 | 28.0 |
E020 | chr19 | 11346627 | 11346634 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.6 | 0.019 | 0.02659 | NA | NA | NA | 8.0 | 7.0 | 5.0 | 15.0 | 14.0 | 9.0 |
E021 | chr19 | 11348965 | 11349083 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.9 | 0.0791 | 0.2157 | NA | NA | NA | 12.0 | 2.0 | 7.0 | 13.0 | 10.0 | 10.0 |
E022 | chr19 | 11349083 | 11349575 | TRUE | OK | 17.8 | 0.0598 | 0.6686 | 0.9099 | -0.113 | -0.056 | 17.0 | 19.0 | 21.0 | 8.0 | 29.0 | 13.0 |
E023 | chr19 | 11349575 | 11349653 | TRUE | OK | 10.1 | 0.0537 | 0.9134 | 0.9796 | 0.127 | 0.063 | 11.0 | 9.0 | 10.0 | 4.0 | 17.0 | 10.0 |
E024 | chr19 | 11349653 | 11349662 | TRUE | OK | 32.9 | 0.011 | 0.01728 | 0.4702 | 0.665 | 0.332 | 30.0 | 26.0 | 24.0 | 29.0 | 48.0 | 42.0 |
E025 | chr19 | 11349662 | 11349687 | TRUE | OK | 35.6 | 0.00887 | 0.0392 | 0.5905 | 0.537 | 0.268 | 34.0 | 31.0 | 26.0 | 32.0 | 50.0 | 42.0 |
E026 | chr19 | 11349687 | 11349693 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.131 | 0.3604 | NA | NA | NA | 2.0 | 3.0 | 0.0 | 1.0 | 0.0 | 1.0 |
E027 | chr19 | 11349937 | 11350026 | TRUE | OK | 49.8 | 0.0059 | 0.008351 | 0.3664 | 0.570 | 0.285 | 49.0 | 42.0 | 35.0 | 51.0 | 63.0 | 61.0 |
E028 | chr19 | 11350117 | 11350199 | TRUE | OK | 52.5 | 0.00476 | 0.04411 | 0.6073 | 0.411 | 0.206 | 51.0 | 52.0 | 38.0 | 51.0 | 58.0 | 67.0 |
E029 | chr19 | 11350807 | 11350868 | TRUE | OK | 41.7 | 0.0162 | 0.2208 | 0.7649 | 0.340 | 0.170 | 49.0 | 42.0 | 24.0 | 39.0 | 45.0 | 53.0 |
E030 | chr19 | 11350868 | 11350884 | TRUE | OK | 31.3 | 0.0242 | 0.315 | 0.7961 | 0.314 | 0.157 | 38.0 | 34.0 | 15.0 | 30.0 | 38.0 | 34.0 |
E031 | chr19 | 11350884 | 11350979 | TRUE | OK | 41.1 | 0.0108 | 0.04389 | 0.6069 | 0.514 | 0.257 | 43.0 | 38.0 | 25.0 | 48.0 | 52.0 | 42.0 |
E032 | chr19 | 11350979 | 11350989 | TRUE | OK | 24.8 | 0.019 | 0.02314 | 0.5139 | 0.758 | 0.379 | 27.0 | 18.0 | 13.0 | 32.0 | 33.0 | 27.0 |
E033 | chr19 | 11350989 | 11351003 | TRUE | OK | 25.0 | 0.0224 | 0.05767 | 0.6433 | 0.652 | 0.326 | 29.0 | 19.0 | 13.0 | 32.0 | 31.0 | 27.0 |
E034 | chr19 | 11351003 | 11351486 | TRUE | OK | 16.7 | 0.0929 | 0.4802 | 0.8494 | -0.243 | -0.122 | 23.0 | 19.0 | 14.0 | 5.0 | 11.0 | 29.0 |
E035 | chr19 | 11351747 | 11351792 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E036 | chr19 | 11351792 | 11351905 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.5 | 0.0229 | 0.4391 | NA | NA | NA | 11.0 | 7.0 | 8.0 | 4.0 | 8.0 | 7.0 |
E037 | chr19 | 11351905 | 11351931 | TRUE | OK | 32.3 | 0.0372 | 0.3555 | 0.8092 | 0.372 | 0.186 | 37.0 | 31.0 | 20.0 | 46.0 | 38.0 | 23.0 |
E038 | chr19 | 11351931 | 11351940 | TRUE | OK | 30.4 | 0.0269 | 0.2009 | 0.7583 | 0.454 | 0.227 | 32.0 | 30.0 | 18.0 | 43.0 | 36.0 | 24.0 |
E039 | chr19 | 11351940 | 11351961 | TRUE | OK | 37.1 | 0.0211 | 0.3963 | 0.8226 | 0.253 | 0.126 | 38.0 | 45.0 | 22.0 | 47.0 | 41.0 | 30.0 |
E040 | chr19 | 11351961 | 11351973 | TRUE | OK | 37.3 | 0.0189 | 0.6785 | 0.9131 | 0.106 | 0.053 | 36.0 | 51.0 | 24.0 | 44.0 | 40.0 | 29.0 |
E041 | chr19 | 11351973 | 11351997 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.8 | 0.0255 | 0.5442 | NA | NA | NA | 6.0 | 8.0 | 6.0 | 7.0 | 5.0 | 3.0 |
E042 | chr19 | 11352056 | 11352133 | TRUE | OK | 54.4 | 0.00985 | 0.3175 | 0.7966 | 0.216 | 0.108 | 41.0 | 72.0 | 43.0 | 65.0 | 53.0 | 53.0 |
E043 | chr19 | 11352133 | 11352499 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.5 | 0.023 | 0.392 | NA | NA | NA | 3.0 | 8.0 | 6.0 | 6.0 | 7.0 | 9.0 |
E044 | chr19 | 11353377 | 11353450 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0795 | 0.1483 | NA | NA | NA | 0.0 | 2.0 | 1.0 | 4.0 | 2.0 | 2.0 |
E045 | chr19 | 11353450 | 11353572 | TRUE | OK | 65.4 | 0.00572 | 0.5609 | 0.8751 | 0.103 | 0.051 | 53.0 | 88.0 | 54.0 | 64.0 | 71.0 | 63.0 |
E046 | chr19 | 11353572 | 11353737 | TRUE | OK | 22.2 | 0.0109 | 0.4211 | 0.8303 | 0.253 | 0.127 | 17.0 | 26.0 | 20.0 | 15.0 | 28.0 | 28.0 |
E047 | chr19 | 11353737 | 11353749 | TRUE | OK | 11.4 | 0.0221 | 0.2264 | 0.7676 | 0.546 | 0.273 | 9.0 | 9.0 | 11.0 | 7.0 | 15.0 | 18.0 |
E048 | chr19 | 11353749 | 11353791 | TRUE | OK | 13.6 | 0.0245 | 0.5256 | 0.8642 | 0.292 | 0.146 | 12.0 | 11.0 | 15.0 | 8.0 | 16.0 | 20.0 |
E049 | chr19 | 11353791 | 11353827 | TRUE | OK | 45.8 | 0.00763 | 0.5905 | 0.8848 | 0.111 | 0.056 | 32.0 | 62.0 | 42.0 | 48.0 | 46.0 | 45.0 |
E050 | chr19 | 11353827 | 11353874 | TRUE | OK | 45.2 | 0.00674 | 0.5939 | 0.886 | -0.129 | -0.065 | 35.0 | 65.0 | 45.0 | 43.0 | 41.0 | 42.0 |
E051 | chr19 | 11354579 | 11354681 | TRUE | OK | 49.3 | 0.006 | 0.8559 | 0.9647 | -0.041 | -0.021 | 37.0 | 64.0 | 53.0 | 43.0 | 48.0 | 51.0 |
E052 | chr19 | 11354681 | 11354696 | TRUE | OK | 25.9 | 0.00812 | 0.7749 | 0.9427 | 0.079 | 0.039 | 18.0 | 33.0 | 27.0 | 22.0 | 27.0 | 29.0 |
E053 | chr19 | 11354696 | 11354699 | TRUE | OK | 17.8 | 0.00971 | 0.9727 | 0.9935 | -0.002 | -0.001 | 16.0 | 19.0 | 20.0 | 16.0 | 15.0 | 21.0 |
E054 | chr19 | 11354699 | 11354872 | TRUE | OK | 23.1 | 0.00904 | 0.3249 | 0.7995 | -0.280 | -0.140 | 22.0 | 26.0 | 30.0 | 18.0 | 19.0 | 24.0 |
E055 | chr19 | 11354872 | 11354943 | TRUE | OK | 10.8 | 0.0158 | 0.7782 | 0.9439 | 0.123 | 0.062 | 8.0 | 13.0 | 11.0 | 7.0 | 14.0 | 12.0 |
E056 | chr19 | 11354943 | 11354944 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.303 | 0.5071 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 3.0 | 1.0 | 1.0 |
J057 | chr19 | 11344755 | 11345179 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J058 | chr19 | 11345381 | 11345961 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.174 | 0.6808 | NA | NA | NA | 0.0 | 6.0 | 2.0 | 3.0 | 1.0 | 1.0 |
J059 | chr19 | 11345381 | 11346017 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.544 | 0.9607 | NA | NA | NA | 4.0 | 0.0 | 0.0 | 0.0 | 1.0 | 2.0 |
J060 | chr19 | 11346203 | 11346482 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.0837 | 0.07589 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 2.0 | 6.0 | 2.0 |
J061 | chr19 | 11346624 | 11349937 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J062 | chr19 | 11346627 | 11348965 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.234 | 0.1654 | NA | NA | NA | 1.0 | 2.0 | 0.0 | 6.0 | 0.0 | 4.0 |
J063 | chr19 | 11346627 | 11349575 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.451 | 0.8596 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 1.0 | 2.0 | 0.0 |
J064 | chr19 | 11346627 | 11349653 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0111 | 0.1628 | NA | NA | NA | 9.0 | 8.0 | 6.0 | 11.0 | 9.0 | 13.0 |
J065 | chr19 | 11346634 | 11348965 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.0863 | 0.2695 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 3.0 | 1.0 | 1.0 |
J066 | chr19 | 11346634 | 11349575 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J067 | chr19 | 11346634 | 11349653 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.7 | 0.0226 | 0.4141 | NA | NA | NA | 3.0 | 5.0 | 4.0 | 6.0 | 7.0 | 3.0 |
J068 | chr19 | 11349083 | 11349653 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.0443 | 0.001621 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 5.0 | 3.0 | 4.0 |
J069 | chr19 | 11349687 | 11349937 | TRUE | OK | 33.1 | 0.00856 | 0.03501 | 0.5744 | 0.556 | 0.278 | 33.0 | 28.0 | 23.0 | 31.0 | 47.0 | 38.0 |
J070 | chr19 | 11350026 | 11350117 | TRUE | OK | 34.8 | 0.0222 | 0.06312 | 0.6526 | 0.604 | 0.302 | 40.0 | 26.0 | 21.0 | 32.0 | 43.0 | 49.0 |
J071 | chr19 | 11350199 | 11350807 | TRUE | OK | 32.6 | 0.00441 | 0.07461 | 0.6695 | 0.425 | 0.213 | 30.0 | 34.0 | 23.0 | 33.0 | 33.0 | 44.0 |
J072 | chr19 | 11350199 | 11352056 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.7 | 0.301 | 0.8618 | NA | NA | NA | 2.0 | 7.0 | 1.0 | 3.0 | 0.0 | 9.0 |
J073 | chr19 | 11350199 | 11353450 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0712 | 0.8259 | NA | NA | NA | 0.0 | 2.0 | 3.0 | 2.0 | 1.0 | 1.0 |
J074 | chr19 | 11351003 | 11351905 | TRUE | OK | 17.7 | 0.0419 | 0.1113 | 0.7091 | 0.721 | 0.361 | 20.0 | 13.0 | 9.0 | 29.0 | 21.0 | 15.0 |
J075 | chr19 | 11351003 | 11353450 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.565 | 0.5442 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J076 | chr19 | 11351973 | 11352056 | TRUE | OK | 30.1 | 0.0182 | 0.5502 | 0.8719 | 0.160 | 0.080 | 27.0 | 43.0 | 18.0 | 35.0 | 33.0 | 25.0 |
J077 | chr19 | 11351997 | 11353377 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J078 | chr19 | 11352133 | 11353450 | TRUE | OK | 38.0 | 0.00872 | 0.5533 | 0.8728 | 0.131 | 0.065 | 31.0 | 54.0 | 27.0 | 40.0 | 41.0 | 35.0 |
J079 | chr19 | 11353572 | 11353791 | TRUE | OK | 27.6 | 0.0318 | 0.906 | 0.9776 | -0.085 | -0.042 | 16.0 | 43.0 | 28.0 | 33.0 | 21.0 | 24.0 |
J080 | chr19 | 11353874 | 11354579 | TRUE | OK | 40.4 | 0.00918 | 0.7536 | 0.9364 | -0.093 | -0.047 | 28.0 | 59.0 | 41.0 | 38.0 | 39.0 | 37.0 |
J081 | chr19 | 11354696 | 11354872 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0439 | 0.1384 | NA | NA | NA | 1.0 | 5.0 | 1.0 | 3.0 | 7.0 | 4.0 |
N082 | chr19 | 11343120 | 11345251 | TRUE | OK | 420.1 | 0.00216 | 0.2072 | 0.7603 | 0.127 | 0.063 | 390.0 | 491.0 | 375.0 | 433.0 | 424.0 | 415.0 |
N083 | chr19 | 11345415 | 11345519 | TRUE | OK | 614.6 | 0.00304 | 0.5725 | 0.8791 | -0.052 | -0.026 | 649.0 | 695.0 | 576.0 | 566.0 | 584.0 | 630.0 |
N084 | chr19 | 11345628 | 11346007 | TRUE | OK | 14.5 | 0.0159 | 0.2723 | 0.7829 | -0.430 | -0.215 | 11.0 | 26.0 | 14.0 | 10.0 | 10.0 | 16.0 |
N085 | chr19 | 11345628 | 11346126 | TRUE | OK | 481.5 | 0.00617 | 0.1511 | 0.7353 | -0.208 | -0.104 | 520.0 | 603.0 | 436.0 | 443.0 | 392.0 | 501.0 |
N086 | chr19 | 11345628 | 11346207 | TRUE | OK | 30.0 | 0.0119 | 0.7137 | 0.924 | -0.118 | -0.059 | 27.0 | 46.0 | 23.0 | 30.0 | 21.0 | 33.0 |
N087 | chr19 | 11345737 | 11346126 | TRUE | OK | 104.9 | 0.00285 | 0.4048 | 0.8255 | -0.117 | -0.058 | 110.0 | 118.0 | 108.0 | 105.0 | 90.0 | 100.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|