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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr10 | 62183034 | 62184387 | TRUE | OK | 12.9 | 0.0636 | 0.2891 | 0.7882 | 0.579 | 0.290 | 3.0 | 11.5 | 12.1 | 12.9 | 15.7 | 22.2 |
E002 | chr10 | 62193085 | 62198282 | TRUE | OK | 810.0 | 0.00221 | 0.02467 | 0.5234 | 0.226 | 0.113 | 781.9 | 564.1 | 696.0 | 901.5 | 944.0 | 972.6 |
E003 | chr10 | 62198282 | 62198443 | TRUE | OK | 81.7 | 0.0185 | 0.3975 | 0.8231 | 0.210 | 0.105 | 89.7 | 44.8 | 62.4 | 71.5 | 108.7 | 113.1 |
E004 | chr10 | 62199753 | 62199861 | TRUE | OK | 72.4 | 0.0142 | 0.904 | 0.977 | 0.001 | 0.001 | 83.8 | 37.5 | 67.5 | 67.5 | 87.2 | 90.9 |
E005 | chr10 | 62204856 | 62205022 | TRUE | OK | 84.9 | 0.0132 | 0.3657 | 0.8122 | 0.181 | 0.090 | 92.7 | 40.7 | 73.5 | 94.3 | 92.1 | 116.0 |
E006 | chr10 | 62215028 | 62215091 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0702 | 0.9661 | NA | NA | NA | 3.9 | 0.0 | 2.0 | 2.0 | 3.9 | 1.9 |
E007 | chr10 | 62217117 | 62217249 | TRUE | OK | 71.4 | 0.00496 | 0.2899 | 0.7886 | 0.193 | 0.097 | 72.0 | 44.8 | 56.4 | 81.4 | 74.4 | 99.6 |
E008 | chr10 | 62218194 | 62218301 | TRUE | OK | 64.9 | 0.0125 | 0.1385 | 0.7288 | 0.333 | 0.167 | 65.1 | 29.2 | 54.4 | 74.5 | 92.1 | 74.4 |
E009 | chr10 | 62223237 | 62223332 | TRUE | OK | 67.5 | 0.0387 | 0.12 | 0.716 | 0.467 | 0.234 | 71.0 | 19.8 | 55.4 | 85.4 | 95.0 | 78.3 |
E010 | chr10 | 62236065 | 62236263 | TRUE | OK | 98.5 | 0.0118 | 0.1359 | 0.7272 | 0.295 | 0.147 | 102.5 | 44.8 | 82.6 | 113.2 | 124.4 | 123.8 |
E011 | chr10 | 62238156 | 62239647 | TRUE | OK | 76.7 | 0.00457 | 4.219e-05 | 0.01651 | -0.736 | -0.368 | 99.6 | 70.9 | 84.6 | 79.4 | 65.6 | 59.9 |
E012 | chr10 | 62239647 | 62239765 | TRUE | OK | 111.6 | 0.00603 | 0.09358 | 0.6921 | -0.288 | -0.144 | 122.3 | 92.8 | 106.8 | 123.1 | 92.1 | 132.5 |
E013 | chr10 | 62241141 | 62241195 | TRUE | OK | 106.6 | 0.00697 | 0.03646 | 0.5807 | -0.373 | -0.186 | 111.4 | 105.3 | 99.7 | 115.2 | 89.1 | 118.9 |
E014 | chr10 | 62245998 | 62246057 | TRUE | OK | 127.0 | 0.0127 | 0.03542 | 0.5761 | -0.444 | -0.222 | 129.2 | 137.6 | 117.8 | 142.0 | 105.8 | 129.6 |
E015 | chr10 | 62262624 | 62262821 | TRUE | OK | 207.4 | 0.0189 | 0.1393 | 0.7292 | -0.346 | -0.173 | 193.3 | 225.2 | 186.3 | 236.3 | 182.1 | 221.4 |
E016 | chr10 | 62268550 | 62268707 | TRUE | OK | 129.6 | 0.0119 | 0.5727 | 0.8791 | -0.104 | -0.052 | 114.4 | 124.1 | 112.8 | 160.8 | 120.5 | 145.0 |
E017 | chr10 | 62268707 | 62268844 | TRUE | OK | 22.2 | 0.0142 | 0.8617 | 0.9663 | 0.060 | 0.030 | 22.7 | 18.8 | 15.1 | 32.8 | 18.6 | 25.1 |
J018 | chr10 | 62184387 | 62198282 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.906 | 0.6461 | NA | NA | NA | 0.0 | 5.2 | 0.0 | 0.0 | 2.0 | 8.7 |
J019 | chr10 | 62198443 | 62199753 | TRUE | OK | 46.6 | 0.0188 | 0.7263 | 0.9282 | 0.070 | 0.035 | 55.2 | 21.9 | 41.3 | 41.7 | 59.7 | 59.9 |
J020 | chr10 | 62199861 | 62204856 | TRUE | OK | 49.9 | 0.0223 | 0.6096 | 0.8911 | 0.099 | 0.050 | 59.2 | 19.8 | 46.3 | 51.6 | 59.7 | 62.8 |
J021 | chr10 | 62205022 | 62215028 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0582 | 0.5022 | NA | NA | NA | 3.9 | 0.0 | 2.0 | 1.0 | 2.0 | 1.9 |
J022 | chr10 | 62205022 | 62217117 | TRUE | OK | 37.4 | 0.019 | 0.5878 | 0.884 | 0.165 | 0.083 | 42.4 | 25.0 | 24.2 | 35.7 | 37.2 | 59.9 |
J023 | chr10 | 62215091 | 62217117 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.146 | 0.14 | NA | NA | NA | 3.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 |
J024 | chr10 | 62217249 | 62218194 | TRUE | OK | 40.2 | 0.00446 | 0.03301 | 0.5654 | 0.473 | 0.236 | 36.5 | 20.9 | 29.2 | 52.6 | 43.1 | 59.0 |
J025 | chr10 | 62218301 | 62223237 | TRUE | OK | 46.6 | 0.0562 | 0.5575 | 0.874 | 0.186 | 0.093 | 54.2 | 15.6 | 43.3 | 51.6 | 74.4 | 40.6 |
J026 | chr10 | 62223332 | 62236065 | TRUE | OK | 46.4 | 0.0208 | 0.05399 | 0.6349 | 0.535 | 0.268 | 45.4 | 14.6 | 37.3 | 59.6 | 65.6 | 56.1 |
J027 | chr10 | 62236263 | 62239647 | TRUE | OK | 45.1 | 0.00485 | 0.9251 | 0.9824 | -0.026 | -0.013 | 50.3 | 28.2 | 40.3 | 43.7 | 47.0 | 60.9 |
J028 | chr10 | 62239765 | 62241141 | TRUE | OK | 80.3 | 0.00961 | 0.1783 | 0.7483 | -0.274 | -0.137 | 85.8 | 68.8 | 76.5 | 91.3 | 60.7 | 98.6 |
J029 | chr10 | 62241195 | 62245998 | TRUE | OK | 92.4 | 0.00846 | 0.05699 | 0.6418 | -0.367 | -0.184 | 95.6 | 93.8 | 84.6 | 102.3 | 75.4 | 102.5 |
J030 | chr10 | 62246057 | 62262624 | TRUE | OK | 94.4 | 0.0242 | 0.05249 | 0.632 | -0.541 | -0.271 | 91.7 | 115.7 | 88.6 | 107.2 | 71.5 | 91.8 |
J031 | chr10 | 62262821 | 62268550 | TRUE | OK | 112.4 | 0.0122 | 0.4469 | 0.8386 | -0.152 | -0.076 | 95.6 | 112.6 | 101.7 | 132.0 | 105.8 | 126.7 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000182010.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |