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Normalized Counts Table (ENSG00000180398.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr2	46901869	46901873	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.391	0.2375	NA	NA	NA	1.0	1.0	0.0	0.0	0.0	0.0
E002	chr2	46901873	46901966	TRUE	OK	252.1	0.0459	0.2579	0.7783	-0.463	-0.232	201.1	409.8	245.8	231.3	178.2	246.5
E003	chr2	46901966	46904854	TRUE	OK	7238.4	0.00193	0.3493	0.8072	-0.065	-0.032	7469.0	6415.9	7483.7	7760.6	6969.5	7331.5
E004	chr2	46904854	46904957	TRUE	OK	863.2	0.0339	0.3505	0.8076	0.188	0.094	1118.1	416.0	838.0	1019.6	870.6	916.6
E005	chr2	46904957	46905244	TRUE	OK	1491.6	0.0181	0.4733	0.8472	0.110	0.055	1807.4	893.6	1519.9	1725.5	1489.5	1514.1
E006	chr2	46905244	46905270	TRUE	OK	641.2	0.00231	0.8108	0.9528	-0.031	-0.016	725.7	504.7	665.8	694.0	630.7	626.5
E007	chr2	46905270	46905367	TRUE	OK	921.1	0.00108	0.7931	0.948	-0.021	-0.011	1008.7	765.4	940.7	997.8	878.4	935.9
E008	chr2	46905367	46905393	TRUE	OK	715.0	0.00209	0.1871	0.7518	-0.116	-0.058	805.6	658.0	710.1	749.6	639.5	727.1
E009	chr2	46905393	46905465	TRUE	OK	904.3	0.00271	0.05721	0.642	-0.178	-0.089	999.8	881.1	920.6	907.4	797.1	919.5
E010	chr2	46905465	46905590	TRUE	OK	1196.2	0.00106	0.06137	0.65	-0.121	-0.061	1322.2	1085.5	1228.8	1257.9	1093.9	1189.2
E011	chr2	46905590	46905594	TRUE	OK	693.5	0.0017	0.3064	0.7934	-0.086	-0.043	783.9	604.8	699.0	755.5	623.8	694.2
E012	chr2	46905816	46905982	TRUE	OK	15.8	0.0239	0.5656	0.8767	0.220	0.110	7.9	15.6	19.1	17.9	19.6	14.5
E013	chr2	46907528	46907699	FALSE	LOW_COUNTS_INDEP_FILTER	8.8	0.0179	0.1154	NA	NA	NA	11.8	11.5	9.1	5.0	7.8	7.7
E014	chr2	46907699	46907809	TRUE	OK	21.1	0.0475	0.801	0.9501	-0.044	-0.022	20.7	20.9	21.2	30.8	24.5	8.7
E015	chr2	46907809	46907934	TRUE	OK	1214.0	0.00243	0.8799	0.9711	-0.017	-0.008	1348.9	982.2	1241.9	1358.1	1099.7	1253.0
E016	chr2	46907934	46907969	TRUE	OK	1050.2	0.00463	0.5555	0.8734	0.060	0.030	1168.4	778.9	1067.7	1199.3	961.7	1125.4
E017	chr2	46908706	46909022	TRUE	OK	18.6	0.0189	0.3068	0.7935	-0.371	-0.186	20.7	13.6	27.2	22.8	16.6	10.6
E018	chr2	46909022	46909072	TRUE	OK	1157.6	0.00294	0.2723	0.7829	0.097	0.048	1215.7	859.2	1209.7	1299.6	1114.4	1247.2
E019	chr2	46909072	46909177	TRUE	OK	1142.8	0.00224	0.1002	0.6983	0.136	0.068	1143.8	860.2	1196.6	1303.5	1110.5	1242.4
E020	chr2	46910779	46910873	TRUE	OK	46.5	0.0194	0.396	0.8224	0.271	0.135	39.4	33.4	50.4	71.5	33.3	51.2
E021	chr2	46912542	46912658	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0695	0.4898	NA	NA	NA	1.0	2.1	1.0	2.0	2.0	2.9
E022	chr2	46913699	46914068	TRUE	OK	12.0	0.0249	0.2287	0.7685	-0.521	-0.260	8.9	14.6	18.1	8.9	7.8	13.5
E023	chr2	46914068	46914074	FALSE	LOW_COUNTS_INDEP_FILTER	4.1	0.0328	0.4862	NA	NA	NA	4.9	3.1	6.0	3.0	2.9	4.8
E024	chr2	46914074	46914118	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0318	0.3897	NA	NA	NA	5.9	3.1	6.0	3.0	2.9	4.8
E025	chr2	46915722	46915761	TRUE	OK	669.5	0.00188	0.6502	0.9044	0.038	0.019	648.8	562.0	724.2	739.6	627.7	714.5
E026	chr2	46915761	46915780	TRUE	OK	406.0	0.00189	0.898	0.9756	0.014	0.007	404.3	354.5	424.0	451.7	365.3	436.0
E027	chr2	46915780	46915789	TRUE	OK	106.1	0.00361	0.3078	0.7938	-0.164	-0.082	128.2	81.3	118.9	106.2	93.0	109.3
E028	chr2	46915789	46915791	TRUE	OK	48.5	0.0044	0.7698	0.9412	0.054	0.027	53.2	37.5	48.3	48.6	49.9	53.2
E029	chr2	46915791	46915810	TRUE	OK	45.4	0.00435	0.8212	0.9554	-0.051	-0.026	49.3	37.5	48.3	44.7	46.0	46.4
E030	chr2	46915810	46915816	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.398	0.6466	NA	NA	NA	2.0	0.0	0.0	1.0	0.0	0.0
E031	chr2	46915816	46915868	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.149	0.1847	NA	NA	NA	2.0	1.0	1.0	1.0	0.0	0.0
E032	chr2	46915980	46916054	TRUE	OK	17.2	0.00989	0.7303	0.9295	0.108	0.054	20.7	13.6	14.1	17.9	16.6	20.3
E033	chr2	46916054	46916112	TRUE	OK	9.9	0.044	0.438	0.8355	0.373	0.187	13.8	8.3	3.0	13.9	8.8	11.6
E034	chr2	46941571	46941714	TRUE	OK	461.8	0.00117	2.7e-05	0.01181	0.336	0.168	433.8	351.4	413.0	566.9	478.9	526.9
E035	chr2	46941714	46941727	TRUE	OK	278.8	0.00359	0.0006699	0.1053	0.415	0.208	269.2	193.9	236.7	322.7	292.8	357.7
E036	chr2	46941727	46941732	TRUE	OK	11.1	0.0544	0.3014	0.7918	0.636	0.318	8.9	9.4	7.1	23.8	6.9	10.6
E037	chr2	46941732	46941773	FALSE	LOW_COUNTS_INDEP_FILTER	8.8	0.0256	0.147	NA	NA	NA	4.9	7.3	7.1	16.9	8.8	7.7
E038	chr2	46941773	46941855	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0859	0.02	NA	NA	NA	0.0	1.0	0.0	2.0	3.9	2.9
J039	chr2	46905590	46907809	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.398	0.6291	NA	NA	NA	0.0	2.1	2.0	0.0	0.0	2.9
J040	chr2	46905594	46907809	TRUE	OK	665.8	0.00153	0.2525	0.7761	-0.094	-0.047	761.2	574.5	673.8	725.7	594.4	665.2
J041	chr2	46905594	46915722	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.122	0.06801	NA	NA	NA	0.0	1.0	0.0	5.0	1.0	1.0
J042	chr2	46905594	46941571	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.0976	0.7542	NA	NA	NA	1.0	4.2	1.0	1.0	3.9	2.9
J043	chr2	46905982	46907809	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0731	0.39	NA	NA	NA	2.0	3.1	1.0	4.0	5.9	1.0
J044	chr2	46907969	46909022	TRUE	OK	832.6	0.00644	0.5163	0.8612	0.077	0.038	933.8	590.2	852.1	951.1	751.1	917.5
J045	chr2	46907969	46915722	TRUE	OK	28.1	0.00464	0.1362	0.7274	-0.372	-0.186	33.5	29.2	30.2	30.8	20.6	24.2
J046	chr2	46907969	46915980	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.13	0.9413	NA	NA	NA	1.0	1.0	0.0	0.0	1.0	1.0
J047	chr2	46907969	46941571	FALSE	LOW_COUNTS_INDEP_FILTER	5.5	0.076	0.6867	NA	NA	NA	3.0	7.3	4.0	4.0	3.9	10.6
J048	chr2	46909177	46910779	TRUE	OK	39.1	0.0136	0.3807	0.8172	0.257	0.128	36.5	29.2	38.3	60.6	29.4	40.6
J049	chr2	46909177	46912542	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.125	0.949	NA	NA	NA	1.0	0.0	1.0	1.0	1.0	0.0
J050	chr2	46909177	46913699	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.21	0.6961	NA	NA	NA	0.0	3.1	1.0	1.0	0.0	1.9
J051	chr2	46909177	46915722	TRUE	OK	611.9	0.00146	0.4861	0.8516	0.054	0.027	590.6	505.7	662.8	666.2	586.6	659.4
J052	chr2	46909177	46915980	TRUE	OK	11.1	0.00914	0.7861	0.946	0.101	0.051	9.9	8.3	13.1	11.9	10.8	12.6
J053	chr2	46909177	46941571	TRUE	OK	147.1	0.00401	1.402e-06	0.001108	0.692	0.346	135.1	78.2	114.8	198.6	163.5	192.4
J054	chr2	46910873	46914068	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.79	0.3542	NA	NA	NA	0.0	0.0	0.0	3.0	0.0	0.0
J055	chr2	46910873	46915722	TRUE	OK	24.1	0.0138	0.6715	0.9108	0.145	0.072	18.7	21.9	26.2	34.7	16.6	26.1
J056	chr2	46912658	46915722	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N057	chr2	46941725	46950362	TRUE	OK	244.3	0.00236	0.0004551	0.08369	0.385	0.193	238.6	166.8	214.5	281.0	260.5	304.6

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000180398.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE