Raw Counts Table (ENSG00000180228.13)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr2 | 178431413 | 178431414 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.0456 | 0.2336 | NA | NA | NA | 4.0 | 2.0 | 3.0 | 7.0 | 7.0 | 2.0 |
E002 | chr2 | 178431414 | 178431653 | TRUE | OK | 188.3 | 0.02 | 0.2823 | 0.7856 | -0.308 | -0.154 | 175.0 | 278.0 | 167.0 | 166.0 | 157.0 | 187.0 |
E003 | chr2 | 178431653 | 178431965 | TRUE | OK | 561.1 | 0.00702 | 0.217 | 0.7636 | -0.194 | -0.097 | 568.0 | 678.0 | 530.0 | 525.0 | 508.0 | 566.0 |
E004 | chr2 | 178431965 | 178431975 | TRUE | OK | 310.9 | 0.00211 | 0.3491 | 0.8072 | -0.097 | -0.048 | 337.0 | 312.0 | 316.0 | 306.0 | 280.0 | 322.0 |
E005 | chr2 | 178431975 | 178432254 | TRUE | OK | 733.5 | 0.00111 | 0.4993 | 0.8555 | 0.051 | 0.025 | 751.0 | 727.0 | 706.0 | 747.0 | 731.0 | 759.0 |
E006 | chr2 | 178436144 | 178436273 | TRUE | OK | 605.3 | 0.00178 | 0.1417 | 0.731 | 0.129 | 0.065 | 617.0 | 605.0 | 541.0 | 636.0 | 632.0 | 618.0 |
E007 | chr2 | 178436273 | 178436319 | TRUE | OK | 416.5 | 0.00494 | 0.5641 | 0.8763 | 0.071 | 0.035 | 449.0 | 434.0 | 347.0 | 429.0 | 438.0 | 413.0 |
E008 | chr2 | 178441609 | 178441704 | TRUE | OK | 445.5 | 0.00215 | 0.1089 | 0.7067 | -0.158 | -0.079 | 482.0 | 475.0 | 446.0 | 450.0 | 411.0 | 418.0 |
E009 | chr2 | 178443266 | 178443288 | TRUE | OK | 317.9 | 0.00263 | 0.5745 | 0.8797 | -0.061 | -0.031 | 344.0 | 300.0 | 333.0 | 325.0 | 301.0 | 313.0 |
E010 | chr2 | 178443288 | 178443342 | TRUE | OK | 380.3 | 0.00206 | 0.6878 | 0.916 | -0.039 | -0.020 | 408.0 | 357.0 | 396.0 | 367.0 | 372.0 | 393.0 |
E011 | chr2 | 178443342 | 178443384 | TRUE | OK | 375.7 | 0.00316 | 0.822 | 0.9557 | -0.024 | -0.012 | 407.0 | 351.0 | 384.0 | 344.0 | 367.0 | 413.0 |
E012 | chr2 | 178443384 | 178444007 | TRUE | OK | 47.5 | 0.00654 | 0.003307 | 0.2446 | 0.646 | 0.323 | 48.0 | 34.0 | 31.0 | 55.0 | 53.0 | 67.0 |
E013 | chr2 | 178444421 | 178444500 | TRUE | OK | 557.6 | 0.00554 | 0.9975 | 0.9993 | 0.003 | 0.002 | 622.0 | 517.0 | 543.0 | 490.0 | 569.0 | 623.0 |
E014 | chr2 | 178445425 | 178445494 | TRUE | OK | 39.4 | 0.00498 | 0.3512 | 0.8077 | -0.208 | -0.104 | 46.0 | 42.0 | 39.0 | 40.0 | 34.0 | 36.0 |
E015 | chr2 | 178445494 | 178445535 | TRUE | OK | 37.4 | 0.00508 | 0.2322 | 0.77 | -0.271 | -0.136 | 41.0 | 41.0 | 41.0 | 37.0 | 32.0 | 33.0 |
E016 | chr2 | 178445535 | 178445883 | TRUE | OK | 46.2 | 0.0156 | 0.7326 | 0.9303 | 0.098 | 0.049 | 44.0 | 36.0 | 55.0 | 40.0 | 61.0 | 43.0 |
E017 | chr2 | 178447319 | 178447455 | TRUE | OK | 19.0 | 0.027 | 0.8276 | 0.9572 | 0.080 | 0.040 | 20.0 | 11.0 | 25.0 | 14.0 | 21.0 | 24.0 |
E018 | chr2 | 178447455 | 178447504 | TRUE | OK | 26.0 | 0.0447 | 0.5568 | 0.8738 | -0.236 | -0.118 | 34.0 | 17.0 | 34.0 | 14.0 | 34.0 | 24.0 |
E019 | chr2 | 178447504 | 178447586 | TRUE | OK | 612.8 | 0.00512 | 0.8973 | 0.9754 | -0.015 | -0.008 | 687.0 | 564.0 | 607.0 | 565.0 | 593.0 | 681.0 |
E020 | chr2 | 178450078 | 178450241 | TRUE | OK | 15.9 | 0.0218 | 0.1133 | 0.7112 | 0.619 | 0.309 | 17.0 | 10.0 | 11.0 | 25.0 | 20.0 | 13.0 |
E021 | chr2 | 178450241 | 178450411 | TRUE | OK | 817.7 | 0.00332 | 0.5767 | 0.8804 | 0.060 | 0.030 | 897.0 | 742.0 | 795.0 | 795.0 | 846.0 | 858.0 |
E022 | chr2 | 178450411 | 178450484 | TRUE | OK | 27.4 | 0.0544 | 0.7688 | 0.9409 | -0.157 | -0.079 | 20.0 | 22.0 | 45.0 | 19.0 | 37.0 | 22.0 |
E023 | chr2 | 178450484 | 178450561 | TRUE | OK | 21.7 | 0.0563 | 0.5662 | 0.877 | -0.332 | -0.166 | 17.0 | 16.0 | 40.0 | 14.0 | 24.0 | 20.0 |
E024 | chr2 | 178450561 | 178450729 | TRUE | OK | 20.7 | 0.0193 | 0.8501 | 0.9632 | -0.066 | -0.033 | 21.0 | 15.0 | 28.0 | 18.0 | 26.0 | 17.0 |
E025 | chr2 | 178450729 | 178450757 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.8 | 0.0363 | 0.1165 | NA | NA | NA | 7.0 | 5.0 | 11.0 | 4.0 | 6.0 | 2.0 |
E026 | chr2 | 178450757 | 178450764 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0684 | 0.3315 | NA | NA | NA | 5.0 | 2.0 | 5.0 | 4.0 | 3.0 | 0.0 |
E027 | chr2 | 178450764 | 178450965 | TRUE | OK | 12.3 | 0.0144 | 0.5548 | 0.8732 | -0.232 | -0.116 | 15.0 | 9.0 | 16.0 | 11.0 | 13.0 | 10.0 |
E028 | chr2 | 178450965 | 178451021 | TRUE | OK | 469.6 | 0.00361 | 0.3703 | 0.8135 | 0.104 | 0.052 | 506.0 | 408.0 | 463.0 | 486.0 | 472.0 | 499.0 |
E029 | chr2 | 178451021 | 178451059 | TRUE | OK | 388.9 | 0.00302 | 0.224 | 0.7664 | 0.136 | 0.068 | 414.0 | 337.0 | 377.0 | 412.0 | 402.0 | 405.0 |
E030 | chr2 | 178451059 | 178451113 | TRUE | OK | 353.8 | 0.00208 | 0.1326 | 0.7247 | 0.152 | 0.076 | 374.0 | 313.0 | 333.0 | 372.0 | 369.0 | 374.0 |
E031 | chr2 | 178451113 | 178451151 | TRUE | OK | 237.3 | 0.00217 | 0.4456 | 0.838 | 0.085 | 0.043 | 250.0 | 220.0 | 227.0 | 255.0 | 234.0 | 245.0 |
E032 | chr2 | 178451151 | 178451173 | TRUE | OK | 21.4 | 0.0085 | 0.1956 | 0.7562 | 0.388 | 0.194 | 17.0 | 19.0 | 20.0 | 28.0 | 21.0 | 24.0 |
E033 | chr2 | 178451173 | 178451175 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.0346 | 0.06718 | NA | NA | NA | 2.0 | 3.0 | 5.0 | 4.0 | 10.0 | 8.0 |
E034 | chr2 | 178451380 | 178451512 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.025 | 0.7015 | NA | NA | NA | 11.0 | 6.0 | 6.0 | 7.0 | 4.0 | 9.0 |
J035 | chr2 | 178432254 | 178436144 | TRUE | OK | 277.0 | 0.00132 | 0.1922 | 0.7545 | 0.126 | 0.063 | 265.0 | 267.0 | 271.0 | 287.0 | 276.0 | 304.0 |
J036 | chr2 | 178436319 | 178441609 | TRUE | OK | 295.9 | 0.00268 | 0.3596 | 0.8107 | -0.105 | -0.053 | 321.0 | 328.0 | 271.0 | 298.0 | 291.0 | 272.0 |
J037 | chr2 | 178441704 | 178443266 | TRUE | OK | 275.0 | 0.0044 | 0.5251 | 0.8639 | -0.083 | -0.042 | 297.0 | 256.0 | 298.0 | 291.0 | 249.0 | 266.0 |
J038 | chr2 | 178443384 | 178444421 | TRUE | OK | 324.9 | 0.00388 | 0.9757 | 0.994 | -0.001 | -0.000 | 341.0 | 299.0 | 341.0 | 291.0 | 323.0 | 365.0 |
J039 | chr2 | 178443384 | 178447504 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.638 | 0.3675 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 |
J040 | chr2 | 178444500 | 178445425 | TRUE | OK | 20.2 | 0.00754 | 0.9884 | 0.9972 | 0.003 | 0.002 | 26.0 | 18.0 | 17.0 | 24.0 | 16.0 | 21.0 |
J041 | chr2 | 178444500 | 178447455 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.3 | 0.0502 | 0.1816 | NA | NA | NA | 9.0 | 10.0 | 12.0 | 3.0 | 12.0 | 4.0 |
J042 | chr2 | 178444500 | 178447504 | TRUE | OK | 386.0 | 0.00553 | 0.5298 | 0.8653 | 0.090 | 0.045 | 428.0 | 350.0 | 357.0 | 351.0 | 389.0 | 455.0 |
J043 | chr2 | 178445535 | 178447504 | TRUE | OK | 10.5 | 0.0113 | 0.9164 | 0.9804 | -0.044 | -0.022 | 10.0 | 14.0 | 8.0 | 12.0 | 8.0 | 11.0 |
J044 | chr2 | 178447586 | 178450241 | TRUE | OK | 444.4 | 0.00529 | 0.7648 | 0.9397 | -0.039 | -0.019 | 509.0 | 406.0 | 442.0 | 390.0 | 444.0 | 490.0 |
J045 | chr2 | 178450411 | 178450561 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.321 | 0.2994 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 2.0 | 4.0 | 0.0 |
J046 | chr2 | 178450411 | 178450965 | TRUE | OK | 386.9 | 0.00293 | 0.1447 | 0.7323 | 0.162 | 0.081 | 408.0 | 338.0 | 367.0 | 416.0 | 380.0 | 426.0 |
J047 | chr2 | 178451021 | 178451380 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.271 | 0.07846 | NA | NA | NA | 1.0 | 3.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N048 | chr2 | 178430889 | 178433381 | TRUE | OK | 149.2 | 0.00691 | 3.159e-05 | 0.01326 | 0.713 | 0.356 | 139.0 | 95.0 | 115.0 | 162.0 | 186.0 | 207.0 |
N049 | chr2 | 178433475 | 178438866 | TRUE | OK | 14.5 | 0.00981 | 0.001108 | 0.1398 | 1.185 | 0.592 | 11.0 | 5.0 | 11.0 | 18.0 | 18.0 | 25.0 |
N050 | chr2 | 178447586 | 178450965 | TRUE | OK | 12.1 | 0.0104 | 0.1732 | 0.7455 | -0.519 | -0.259 | 17.0 | 12.0 | 14.0 | 12.0 | 6.0 | 12.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|