Raw Counts Table (ENSG00000178802.18)
| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC
(yes/no) | log2FCvst
(yes/no) | Raw Counts |
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
| E001 | chr15 | 74890004 | 74890038 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.296 | 0.7224 | NA | NA | NA | 0.0 | 1.0 | 9.0 | 3.0 | 3.0 | 3.0 |
| E002 | chr15 | 74890038 | 74890041 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.7 | 0.184 | 0.9828 | NA | NA | NA | 0.0 | 3.0 | 9.0 | 3.0 | 4.0 | 3.0 |
| E003 | chr15 | 74890041 | 74890042 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.209 | 0.9764 | NA | NA | NA | 0.0 | 3.0 | 10.0 | 3.0 | 4.0 | 3.0 |
| E004 | chr15 | 74890042 | 74890045 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.2 | 0.208 | 0.8192 | NA | NA | NA | 0.0 | 3.0 | 10.0 | 4.0 | 5.0 | 3.0 |
| E005 | chr15 | 74890045 | 74890051 | TRUE | OK | 12.4 | 0.0149 | 0.5679 | 0.8774 | -0.225 | -0.113 | 14.0 | 9.0 | 18.0 | 10.0 | 12.0 | 12.0 |
| E006 | chr15 | 74890051 | 74890052 | TRUE | OK | 12.4 | 0.0186 | 0.588 | 0.8841 | -0.225 | -0.112 | 14.0 | 8.0 | 19.0 | 10.0 | 12.0 | 12.0 |
| E007 | chr15 | 74890052 | 74890061 | TRUE | OK | 15.3 | 0.011 | 0.5529 | 0.8726 | -0.207 | -0.104 | 17.0 | 13.0 | 20.0 | 13.0 | 15.0 | 14.0 |
| E008 | chr15 | 74890061 | 74890071 | TRUE | OK | 65.0 | 0.00626 | 0.4359 | 0.8348 | 0.151 | 0.076 | 68.0 | 61.0 | 60.0 | 71.0 | 60.0 | 72.0 |
| E009 | chr15 | 74890071 | 74890076 | TRUE | OK | 98.7 | 0.0087 | 0.948 | 0.9878 | -0.018 | -0.009 | 114.0 | 100.0 | 90.0 | 102.0 | 88.0 | 101.0 |
| E010 | chr15 | 74890076 | 74890089 | TRUE | OK | 139.1 | 0.0111 | 0.9557 | 0.9896 | -0.019 | -0.010 | 169.0 | 129.0 | 131.0 | 142.0 | 127.0 | 141.0 |
| E011 | chr15 | 74890089 | 74890201 | TRUE | OK | 14.2 | 0.0188 | 0.6671 | 0.9095 | -0.157 | -0.078 | 17.0 | 10.0 | 19.0 | 8.0 | 14.0 | 18.0 |
| E012 | chr15 | 74890201 | 74890437 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.4 | 0.0595 | 0.7855 | NA | NA | NA | 15.0 | 3.0 | 10.0 | 10.0 | 10.0 | 9.0 |
| E013 | chr15 | 74890437 | 74890526 | TRUE | OK | 13.3 | 0.0416 | 0.7154 | 0.9246 | 0.194 | 0.097 | 15.0 | 9.0 | 14.0 | 15.0 | 20.0 | 7.0 |
| E014 | chr15 | 74890526 | 74890549 | TRUE | OK | 163.7 | 0.00924 | 0.6109 | 0.8915 | 0.087 | 0.043 | 192.0 | 142.0 | 154.0 | 166.0 | 164.0 | 170.0 |
| E015 | chr15 | 74890549 | 74890552 | TRUE | OK | 165.2 | 0.00923 | 0.6694 | 0.9102 | 0.071 | 0.036 | 196.0 | 144.0 | 155.0 | 165.0 | 166.0 | 171.0 |
| E016 | chr15 | 74890552 | 74890555 | TRUE | OK | 167.0 | 0.0097 | 0.685 | 0.9152 | 0.068 | 0.034 | 199.0 | 145.0 | 157.0 | 167.0 | 166.0 | 174.0 |
| E017 | chr15 | 74890555 | 74890654 | TRUE | OK | 259.7 | 0.0116 | 0.7941 | 0.9482 | -0.060 | -0.030 | 302.0 | 224.0 | 285.0 | 258.0 | 250.0 | 247.0 |
| E018 | chr15 | 74890654 | 74890973 | TRUE | OK | 16.9 | 0.00948 | 0.761 | 0.9387 | 0.102 | 0.051 | 17.0 | 19.0 | 14.0 | 15.0 | 20.0 | 17.0 |
| E019 | chr15 | 74890978 | 74891035 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0641 | 0.9563 | NA | NA | NA | 2.0 | 2.0 | 3.0 | 4.0 | 2.0 | 1.0 |
| E020 | chr15 | 74891378 | 74891414 | TRUE | OK | 264.2 | 0.0112 | 0.9928 | 0.9981 | -0.006 | -0.003 | 291.0 | 232.0 | 288.0 | 275.0 | 257.0 | 250.0 |
| E021 | chr15 | 74891414 | 74891489 | TRUE | OK | 279.6 | 0.00982 | 0.9962 | 0.999 | -0.007 | -0.003 | 301.0 | 254.0 | 303.0 | 291.0 | 272.0 | 264.0 |
| E022 | chr15 | 74891489 | 74891564 | TRUE | OK | 203.0 | 0.0122 | 0.8888 | 0.9733 | -0.035 | -0.018 | 231.0 | 178.0 | 220.0 | 210.0 | 181.0 | 204.0 |
| E023 | chr15 | 74891564 | 74891579 | TRUE | OK | 129.8 | 0.011 | 0.9646 | 0.9918 | 0.006 | 0.003 | 148.0 | 117.0 | 132.0 | 134.0 | 111.0 | 141.0 |
| E024 | chr15 | 74892660 | 74892687 | TRUE | OK | 147.4 | 0.00982 | 0.9742 | 0.9938 | 0.004 | 0.002 | 165.0 | 133.0 | 153.0 | 148.0 | 127.0 | 163.0 |
| E025 | chr15 | 74892687 | 74892733 | TRUE | OK | 175.8 | 0.00403 | 0.8878 | 0.973 | -0.022 | -0.011 | 187.0 | 168.0 | 187.0 | 167.0 | 163.0 | 188.0 |
| E026 | chr15 | 74892733 | 74892781 | TRUE | OK | 186.7 | 0.00536 | 0.7351 | 0.9312 | 0.048 | 0.024 | 190.0 | 173.0 | 200.0 | 185.0 | 174.0 | 204.0 |
| E027 | chr15 | 74892781 | 74892802 | TRUE | OK | 165.6 | 0.00558 | 0.9507 | 0.9885 | 0.005 | 0.003 | 168.0 | 152.0 | 186.0 | 163.0 | 156.0 | 173.0 |
| E028 | chr15 | 74892802 | 74892870 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.0 | 0.0241 | 0.9352 | NA | NA | NA | 6.0 | 4.0 | 8.0 | 5.0 | 6.0 | 7.0 |
| E029 | chr15 | 74892870 | 74893088 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.9 | 0.0207 | 0.2989 | NA | NA | NA | 11.0 | 4.0 | 8.0 | 10.0 | 12.0 | 9.0 |
| E030 | chr15 | 74893137 | 74893219 | TRUE | OK | 200.8 | 0.00784 | 0.1947 | 0.7559 | 0.217 | 0.109 | 202.0 | 171.0 | 200.0 | 216.0 | 195.0 | 228.0 |
| E031 | chr15 | 74893219 | 74893230 | TRUE | OK | 137.2 | 0.0125 | 0.2179 | 0.7641 | 0.260 | 0.130 | 137.0 | 114.0 | 134.0 | 160.0 | 126.0 | 157.0 |
| E032 | chr15 | 74893230 | 74893242 | TRUE | OK | 136.2 | 0.0139 | 0.2933 | 0.7896 | 0.233 | 0.116 | 139.0 | 113.0 | 134.0 | 157.0 | 121.0 | 158.0 |
| E033 | chr15 | 74893242 | 74893245 | TRUE | OK | 133.3 | 0.0128 | 0.2343 | 0.7706 | 0.255 | 0.127 | 134.0 | 110.0 | 131.0 | 154.0 | 121.0 | 155.0 |
| E034 | chr15 | 74893245 | 74893320 | TRUE | OK | 173.7 | 0.0103 | 0.1468 | 0.7333 | 0.274 | 0.137 | 177.0 | 141.0 | 168.0 | 195.0 | 169.0 | 199.0 |
| E035 | chr15 | 74893320 | 74893786 | TRUE | OK | 47.9 | 0.0137 | 0.7778 | 0.9438 | -0.077 | -0.038 | 46.0 | 52.0 | 52.0 | 55.0 | 37.0 | 46.0 |
| E036 | chr15 | 74895433 | 74896151 | TRUE | OK | 41.9 | 0.0283 | 0.0194 | 0.4865 | -0.832 | -0.416 | 62.0 | 67.0 | 33.0 | 30.0 | 26.0 | 33.0 |
| E037 | chr15 | 74896151 | 74896188 | TRUE | OK | 150.9 | 0.0129 | 0.2614 | 0.7793 | 0.230 | 0.115 | 173.0 | 116.0 | 140.0 | 157.0 | 149.0 | 177.0 |
| E038 | chr15 | 74896188 | 74896325 | TRUE | OK | 177.7 | 0.00644 | 0.8249 | 0.9565 | 0.032 | 0.016 | 204.0 | 160.0 | 175.0 | 171.0 | 172.0 | 190.0 |
| E039 | chr15 | 74896325 | 74896538 | TRUE | OK | 29.8 | 0.00877 | 0.4345 | 0.8342 | 0.207 | 0.103 | 22.0 | 26.0 | 37.0 | 27.0 | 31.0 | 37.0 |
| E040 | chr15 | 74896538 | 74896930 | TRUE | OK | 24.4 | 0.0146 | 0.5797 | 0.8812 | 0.184 | 0.092 | 20.0 | 22.0 | 28.0 | 21.0 | 36.0 | 20.0 |
| E041 | chr15 | 74896930 | 74896955 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.7 | 0.0227 | 0.7091 | NA | NA | NA | 6.0 | 10.0 | 12.0 | 8.0 | 11.0 | 5.0 |
| E042 | chr15 | 74896955 | 74897010 | TRUE | OK | 12.3 | 0.017 | 0.6516 | 0.905 | -0.191 | -0.095 | 9.0 | 13.0 | 18.0 | 13.0 | 10.0 | 11.0 |
| E043 | chr15 | 74897010 | 74897092 | TRUE | OK | 128.3 | 0.00815 | 0.592 | 0.8853 | -0.104 | -0.052 | 154.0 | 125.0 | 127.0 | 126.0 | 114.0 | 127.0 |
| E044 | chr15 | 74897092 | 74897219 | TRUE | OK | 155.4 | 0.00677 | 0.7609 | 0.9387 | -0.056 | -0.028 | 173.0 | 162.0 | 149.0 | 158.0 | 149.0 | 145.0 |
| E045 | chr15 | 74897219 | 74897511 | TRUE | OK | 14.3 | 0.0118 | 0.9461 | 0.9872 | -0.024 | -0.012 | 11.0 | 18.0 | 15.0 | 11.0 | 14.0 | 17.0 |
| E046 | chr15 | 74897511 | 74897538 | TRUE | OK | 110.5 | 0.00457 | 0.4273 | 0.8322 | -0.129 | -0.065 | 126.0 | 118.0 | 108.0 | 103.0 | 114.0 | 96.0 |
| E047 | chr15 | 74897538 | 74897658 | TRUE | OK | 168.5 | 0.00401 | 0.6988 | 0.9195 | -0.058 | -0.029 | 185.0 | 178.0 | 162.0 | 162.0 | 169.0 | 159.0 |
| E048 | chr15 | 74897658 | 74897957 | TRUE | OK | 288.9 | 0.00894 | 0.5938 | 0.886 | -0.110 | -0.055 | 279.0 | 363.0 | 269.0 | 270.0 | 284.0 | 272.0 |
| E049 | chr15 | 74897957 | 74898044 | TRUE | OK | 163.4 | 0.0124 | 0.3547 | 0.8089 | -0.216 | -0.108 | 153.0 | 227.0 | 152.0 | 137.0 | 168.0 | 144.0 |
| E050 | chr15 | 74898044 | 74898077 | TRUE | OK | 139.1 | 0.00776 | 0.06156 | 0.6502 | -0.345 | -0.173 | 141.0 | 188.0 | 142.0 | 114.0 | 137.0 | 113.0 |
| E051 | chr15 | 74898077 | 74898228 | TRUE | OK | 113.2 | 0.00355 | 0.008937 | 0.3768 | -0.398 | -0.199 | 127.0 | 140.0 | 123.0 | 97.0 | 101.0 | 92.0 |
| E052 | chr15 | 74898228 | 74899441 | TRUE | OK | 111.4 | 0.00342 | 0.5168 | 0.8613 | -0.098 | -0.049 | 112.0 | 130.0 | 109.0 | 96.0 | 121.0 | 102.0 |
| E053 | chr15 | 74899441 | 74899991 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0327 | 0.8245 | NA | NA | NA | 8.0 | 3.0 | 7.0 | 4.0 | 4.0 | 8.0 |
| E054 | chr15 | 74899991 | 74900200 | TRUE | OK | 297.1 | 0.0234 | 0.7178 | 0.9254 | -0.114 | -0.057 | 239.0 | 415.0 | 281.0 | 200.0 | 326.0 | 324.0 |
| E055 | chr15 | 74900200 | 74900483 | TRUE | OK | 501.4 | 0.0162 | 0.9733 | 0.9935 | 0.016 | 0.008 | 439.0 | 613.0 | 470.0 | 354.0 | 539.0 | 604.0 |
| E056 | chr15 | 74900483 | 74900689 | TRUE | OK | 384.4 | 0.00253 | 0.2291 | 0.7688 | 0.131 | 0.066 | 354.0 | 387.0 | 389.0 | 321.0 | 412.0 | 455.0 |
| E057 | chr15 | 74900689 | 74902219 | TRUE | OK | 1268.6 | 0.00556 | 0.6148 | 0.8928 | 0.077 | 0.038 | 1304.0 | 1182.0 | 1339.0 | 1045.0 | 1404.0 | 1378.0 |
| J058 | chr15 | 74890089 | 74890437 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0506 | 0.09299 | NA | NA | NA | 0.0 | 2.0 | 1.0 | 4.0 | 3.0 | 2.0 |
| J059 | chr15 | 74890089 | 74890526 | TRUE | OK | 121.3 | 0.0125 | 0.9485 | 0.9879 | -0.025 | -0.012 | 153.0 | 110.0 | 112.0 | 122.0 | 111.0 | 124.0 |
| J060 | chr15 | 74890089 | 74890552 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.103 | 0.9811 | NA | NA | NA | 1.0 | 0.0 | 2.0 | 0.0 | 2.0 | 1.0 |
| J061 | chr15 | 74890089 | 74890555 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.472 | 0.6716 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
| J062 | chr15 | 74890089 | 74891378 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.5 | 0.0291 | 0.2988 | NA | NA | NA | 8.0 | 9.0 | 10.0 | 9.0 | 2.0 | 7.0 |
| J063 | chr15 | 74890201 | 74890526 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.5 | 0.0183 | 0.9464 | NA | NA | NA | 6.0 | 7.0 | 10.0 | 3.0 | 8.0 | 11.0 |
| J064 | chr15 | 74890654 | 74890978 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J065 | chr15 | 74890654 | 74891378 | TRUE | OK | 227.4 | 0.011 | 0.9193 | 0.9811 | -0.028 | -0.014 | 259.0 | 196.0 | 248.0 | 231.0 | 220.0 | 217.0 |
| J066 | chr15 | 74890654 | 74891414 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.551 | 0.5674 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 3.0 | 0.0 |
| J067 | chr15 | 74891035 | 74891378 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.556 | 0.5415 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| J068 | chr15 | 74891489 | 74892660 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.556 | 0.5415 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| J069 | chr15 | 74891489 | 74897538 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.5504 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
| J070 | chr15 | 74891564 | 74892687 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.233 | 0.824 | NA | NA | NA | 8.0 | 1.0 | 1.0 | 2.0 | 1.0 | 4.0 |
| J071 | chr15 | 74891579 | 74892660 | TRUE | OK | 120.4 | 0.0125 | 0.9719 | 0.9933 | 0.007 | 0.003 | 137.0 | 108.0 | 123.0 | 124.0 | 99.0 | 135.0 |
| J072 | chr15 | 74892802 | 74893137 | TRUE | OK | 140.8 | 0.00376 | 0.5416 | 0.8694 | 0.086 | 0.043 | 141.0 | 129.0 | 149.0 | 139.0 | 133.0 | 158.0 |
| J073 | chr15 | 74892802 | 74896151 | TRUE | OK | 9.9 | 0.0125 | 0.00173 | 0.1772 | -1.385 | -0.693 | 14.0 | 14.0 | 15.0 | 5.0 | 9.0 | 2.0 |
| J074 | chr15 | 74893320 | 74896151 | TRUE | OK | 106.8 | 0.0142 | 0.05455 | 0.6364 | 0.431 | 0.216 | 112.0 | 73.0 | 97.0 | 127.0 | 115.0 | 122.0 |
| J075 | chr15 | 74896325 | 74897010 | TRUE | OK | 87.6 | 0.0126 | 0.5368 | 0.8677 | -0.144 | -0.072 | 109.0 | 87.0 | 85.0 | 88.0 | 69.0 | 90.0 |
| J076 | chr15 | 74896325 | 74897511 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.0 | 0.0133 | 0.5158 | NA | NA | NA | 7.0 | 11.0 | 12.0 | 4.0 | 10.0 | 10.0 |
| J077 | chr15 | 74897219 | 74897511 | TRUE | OK | 83.0 | 0.00563 | 0.9048 | 0.9773 | -0.025 | -0.012 | 92.0 | 84.0 | 80.0 | 86.0 | 85.0 | 73.0 |
| J078 | chr15 | 74900200 | 74900483 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.17 | 0.9639 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 | 1.0 |
| N079 | chr15 | 74900599 | 74901949 | TRUE | OK | 10.4 | 0.0161 | 0.07824 | 0.6751 | 0.747 | 0.373 | 7.0 | 12.0 | 5.0 | 13.0 | 10.0 | 16.0 |
| N080 | chr15 | 74900631 | 74901949 | TRUE | OK | 10.8 | 0.0291 | 0.08388 | 0.6819 | 0.816 | 0.408 | 5.0 | 12.0 | 7.0 | 8.0 | 13.0 | 20.0 |
| N081 | chr15 | 74900674 | 74901949 | TRUE | OK | 21.4 | 0.00732 | 0.05158 | 0.6292 | 0.568 | 0.284 | 15.0 | 22.0 | 16.0 | 28.0 | 25.0 | 23.0 |
| N082 | chr15 | 74902063 | 74902603 | TRUE | OK | 69.9 | 0.00315 | 5.724e-06 | 0.003516 | 0.780 | 0.390 | 57.0 | 49.0 | 54.0 | 87.0 | 85.0 | 91.0 |
| Color Codes |
|---|
|
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|