Normalized Counts Table (ENSG00000177189.13)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chrX	20149910	20153661	TRUE	OK	2407.1	0.00649	0.1355	0.7269	-0.185	-0.092	2545.9	2136.5	2519.1	2409.5	2331.7	2500.2
E002	chrX	20153661	20153806	TRUE	OK	174.3	0.00365	0.3517	0.8079	-0.137	-0.068	195.2	125.1	204.5	159.8	170.4	190.5
E003	chrX	20153806	20154589	TRUE	OK	493.1	0.01	0.8595	0.9657	-0.011	-0.005	575.8	290.9	556.0	557.9	476.9	500.8
E004	chrX	20154589	20154750	TRUE	OK	232.0	0.00794	0.8332	0.9587	0.004	0.002	274.1	138.7	252.8	266.1	233.1	227.2
E005	chrX	20154750	20154786	TRUE	OK	144.4	0.013	0.962	0.9911	-0.016	-0.008	188.3	89.7	139.0	181.7	129.3	138.3
E006	chrX	20154786	20154795	TRUE	OK	123.2	0.013	0.9712	0.9931	-0.015	-0.007	159.7	77.2	118.9	156.9	113.6	113.1
E007	chrX	20154795	20154834	TRUE	OK	136.3	0.00534	0.3607	0.811	-0.154	-0.077	173.5	101.1	138.0	156.9	120.5	127.6
E008	chrX	20154834	20154845	TRUE	OK	117.0	0.00393	0.4381	0.8355	-0.116	-0.058	136.1	95.9	117.8	139.0	100.9	112.2
E009	chrX	20154845	20154931	TRUE	OK	169.7	0.00311	0.4176	0.8293	-0.104	-0.052	196.2	143.9	165.2	191.6	153.7	167.3
E010	chrX	20154931	20154965	TRUE	OK	167.0	0.00332	0.2306	0.7693	-0.154	-0.077	184.4	156.4	165.2	174.7	155.7	165.3
E011	chrX	20154965	20154977	TRUE	OK	175.4	0.00394	0.2888	0.7881	-0.141	-0.070	197.2	163.7	168.2	179.7	166.5	176.9
E012	chrX	20154977	20155256	TRUE	OK	459.2	0.0032	0.6133	0.8923	-0.050	-0.025	504.8	397.3	440.2	485.5	454.4	472.8
E013	chrX	20155256	20155440	TRUE	OK	454.6	0.00161	0.1798	0.7488	0.121	0.060	439.8	353.5	461.3	494.4	459.3	519.2
E014	chrX	20155440	20155520	TRUE	OK	357.1	0.00256	0.0209	0.4986	0.249	0.124	341.2	261.7	337.4	387.2	367.2	447.6
E015	chrX	20156108	20156249	TRUE	OK	444.9	0.00305	0.007989	0.3604	0.286	0.143	401.3	298.2	458.3	502.4	457.3	552.1
E016	chrX	20161643	20161761	TRUE	OK	411.8	0.00177	5.113e-05	0.01924	0.371	0.186	382.6	261.7	392.8	486.5	431.9	515.3
E017	chrX	20162963	20163040	TRUE	OK	330.7	0.00191	0.00174	0.1777	0.304	0.152	329.3	212.7	310.2	380.2	343.7	408.0
E018	chrX	20164898	20164961	TRUE	OK	309.5	0.00224	0.03023	0.5528	0.219	0.109	318.5	199.2	305.2	342.5	317.3	374.2
E019	chrX	20164961	20165060	TRUE	OK	304.5	0.00481	0.1934	0.7554	0.163	0.082	346.1	198.1	282.0	351.4	289.9	359.7
E020	chrX	20167588	20167747	TRUE	OK	379.4	0.00369	0.2152	0.7632	0.132	0.066	406.2	239.8	395.8	409.0	378.0	447.6
E021	chrX	20169401	20169491	TRUE	OK	361.6	0.00264	0.1026	0.7005	0.163	0.081	377.6	233.6	370.7	385.2	379.0	423.5
E022	chrX	20172745	20172864	TRUE	OK	360.0	0.00188	0.3347	0.8024	0.083	0.042	394.4	243.0	367.6	393.1	362.3	399.3
E023	chrX	20172864	20172868	TRUE	OK	231.9	0.00368	0.3026	0.7922	0.118	0.059	263.3	146.0	229.6	268.1	225.2	259.1
E024	chrX	20172868	20172871	TRUE	OK	189.5	0.00321	0.4902	0.8528	0.078	0.039	210.0	122.0	197.4	225.4	179.2	203.0
E025	chrX	20175163	20175288	TRUE	OK	395.8	0.00274	0.3462	0.8059	0.088	0.044	431.9	260.7	410.9	426.9	387.8	456.3
E026	chrX	20176249	20176352	TRUE	OK	360.4	0.00259	0.7535	0.9364	0.027	0.013	398.3	251.3	376.7	391.2	331.0	413.8
E027	chrX	20176433	20176498	TRUE	OK	287.9	0.00358	0.3296	0.8009	0.105	0.053	308.6	184.6	304.2	299.8	290.8	339.4
E028	chrX	20176995	20177084	TRUE	OK	306.1	0.00513	0.7071	0.922	0.037	0.019	346.1	202.3	320.3	299.8	306.5	361.6
E029	chrX	20186295	20186366	TRUE	OK	289.8	0.00213	0.5279	0.8649	0.061	0.031	309.6	203.3	302.2	325.6	267.3	330.7
E030	chrX	20187827	20187970	TRUE	OK	398.5	0.00588	0.7306	0.9296	0.034	0.017	457.5	259.6	415.0	461.6	351.6	445.7
E031	chrX	20188496	20188534	TRUE	OK	283.2	0.00942	0.526	0.8643	0.094	0.047	330.3	173.1	284.0	357.4	249.7	304.6
E032	chrX	20193486	20193593	TRUE	OK	416.8	0.00639	0.3175	0.7966	0.134	0.067	456.5	262.8	425.0	520.2	380.0	456.3
E033	chrX	20194188	20194268	TRUE	OK	464.2	0.00172	0.04802	0.6203	0.172	0.086	476.2	315.9	465.3	557.9	461.2	508.6
E034	chrX	20195064	20195145	TRUE	OK	464.0	0.00254	0.02028	0.4943	0.230	0.115	476.2	302.4	453.3	572.8	456.3	523.1
E035	chrX	20203361	20204021	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.85	0.6488	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
E036	chrX	20204021	20204065	TRUE	OK	378.8	0.007	0.1436	0.7319	0.199	0.099	422.0	221.1	372.7	458.7	365.3	433.1
E037	chrX	20204065	20204103	TRUE	OK	315.1	0.012	0.3666	0.8125	0.135	0.067	380.6	175.2	308.2	367.3	293.8	365.5
E038	chrX	20209287	20209404	TRUE	OK	368.6	0.00972	0.3842	0.8185	0.118	0.059	419.1	208.5	389.8	438.8	346.7	409.0
E039	chrX	20218799	20218870	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E040	chrX	20218870	20218959	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E041	chrX	20234757	20234769	TRUE	OK	220.8	0.0182	0.2723	0.7829	0.214	0.107	249.5	107.4	230.7	293.9	204.7	238.8
E042	chrX	20234769	20234814	TRUE	OK	201.1	0.017	0.2811	0.7853	0.215	0.108	221.9	101.1	211.5	275.0	184.1	212.7
E043	chrX	20235492	20235513	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E044	chrX	20240568	20240605	TRUE	OK	20.1	0.011	0.001208	0.1466	1.040	0.520	13.8	4.2	19.1	29.8	25.5	28.0
E045	chrX	20240605	20240669	FALSE	LOW_COUNTS_INDEP_FILTER	7.7	0.0925	0.1254	NA	NA	NA	4.9	0.0	10.1	13.9	6.9	10.6
E046	chrX	20241592	20241686	TRUE	OK	14.0	0.0115	0.0003863	0.07573	1.357	0.678	9.9	4.2	8.1	23.8	17.6	20.3
E047	chrX	20265498	20265617	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.256	0.6639	NA	NA	NA	0.0	0.0	1.0	0.0	1.0	1.0
E048	chrX	20265922	20266100	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E049	chrX	20266563	20266606	TRUE	OK	135.0	0.0105	0.5814	0.8817	0.098	0.049	149.9	80.3	144.0	180.7	118.5	136.3
E050	chrX	20266606	20266627	TRUE	OK	65.2	0.00856	0.7927	0.9479	0.045	0.022	78.9	40.7	64.5	85.4	59.7	61.9
E051	chrX	20266627	20266659	TRUE	OK	34.3	0.00648	0.2437	0.7735	-0.291	-0.145	47.3	26.1	35.3	36.7	27.4	32.9
E052	chrX	20266659	20266882	TRUE	OK	54.0	0.139	0.2687	0.7819	-0.505	-0.252	68.0	40.7	74.5	70.5	59.7	10.6
E053	chrX	20266882	20267033	TRUE	OK	40.1	0.108	0.126	0.7208	-0.752	-0.376	55.2	30.2	60.4	51.6	34.3	8.7
E054	chrX	20267038	20267066	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.055	0.5131	NA	NA	NA	3.9	3.1	2.0	4.0	1.0	1.9
E055	chrX	20267066	20267089	FALSE	LOW_COUNTS_INDEP_FILTER	1.7	0.08	0.05475	NA	NA	NA	3.0	3.1	2.0	1.0	1.0	0.0
E056	chrX	20267089	20267094	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.333	0.7747	NA	NA	NA	3.0	0.0	0.0	1.0	1.0	0.0
E057	chrX	20267094	20267100	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.333	0.7747	NA	NA	NA	3.0	0.0	0.0	1.0	1.0	0.0
E058	chrX	20267100	20267382	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.394	0.2977	NA	NA	NA	0.0	0.0	0.0	1.0	1.0	0.0
E059	chrX	20267382	20267405	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E060	chrX	20267405	20267519	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J061	chrX	20155520	20156108	TRUE	OK	268.1	0.00308	0.01054	0.3995	0.303	0.152	248.5	181.4	260.9	289.9	277.1	351.0
J062	chrX	20156249	20161643	TRUE	OK	259.8	0.00187	0.000592	0.0982	0.356	0.178	231.7	167.9	255.8	319.7	260.5	322.9
J063	chrX	20161761	20162963	TRUE	OK	237.2	0.0013	6.185e-05	0.02218	0.392	0.196	216.9	150.2	222.6	274.0	260.5	298.8
J064	chrX	20163040	20164898	TRUE	OK	234.4	0.00277	0.03264	0.5641	0.250	0.125	236.6	157.5	221.6	253.2	236.0	301.7
J065	chrX	20164961	20167588	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J066	chrX	20165060	20167588	TRUE	OK	194.1	0.00629	0.4244	0.8312	0.102	0.051	235.7	118.9	183.3	217.4	191.0	218.5
J067	chrX	20167747	20169401	TRUE	OK	217.0	0.00443	0.288	0.7878	0.140	0.070	223.8	141.8	227.6	226.4	206.6	275.5
J068	chrX	20169491	20172745	TRUE	OK	256.2	0.00162	0.07269	0.667	0.173	0.087	270.2	171.0	250.8	272.0	279.1	293.9
J069	chrX	20172868	20175163	TRUE	OK	43.8	0.00382	0.1619	0.7401	0.288	0.144	45.4	31.3	36.3	47.7	44.1	58.0
J070	chrX	20172871	20175163	TRUE	OK	185.5	0.00275	0.3481	0.8068	0.104	0.052	203.1	114.7	195.4	219.4	178.2	202.1
J071	chrX	20175288	20176249	TRUE	OK	249.5	0.00158	0.9694	0.9927	-0.002	-0.001	273.1	175.2	268.9	268.1	229.2	282.3
J072	chrX	20176352	20176433	TRUE	OK	237.2	0.00568	0.3711	0.8139	0.121	0.061	257.3	150.2	245.8	244.2	226.2	299.7
J073	chrX	20176498	20176995	TRUE	OK	187.3	0.00357	0.27	0.7823	0.133	0.066	212.0	119.9	181.3	192.6	198.8	219.5
J074	chrX	20177084	20186295	TRUE	OK	228.2	0.00227	0.9302	0.9836	-0.017	-0.009	254.4	160.6	244.8	227.3	217.4	264.9
J075	chrX	20186366	20187827	TRUE	OK	212.1	0.0028	0.612	0.8918	0.060	0.030	222.8	151.2	222.6	242.2	184.1	249.4
J076	chrX	20186366	20188496	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.264	0.9224	NA	NA	NA	0.0	1.0	0.0	1.0	0.0	0.0
J077	chrX	20187970	20188496	TRUE	OK	240.0	0.00853	0.4346	0.8342	0.113	0.056	281.0	142.9	238.7	294.9	215.4	266.8
J078	chrX	20188534	20193486	TRUE	OK	251.3	0.00905	0.547	0.871	0.088	0.044	289.9	152.2	257.8	312.7	217.4	277.5
J079	chrX	20188534	20204021	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J080	chrX	20193593	20194188	TRUE	OK	286.9	0.00217	0.3013	0.7918	0.106	0.053	297.8	200.2	296.1	350.5	265.4	311.3
J081	chrX	20194268	20195064	TRUE	OK	325.6	0.000956	0.0009579	0.1288	0.277	0.138	318.5	217.9	311.2	397.1	338.8	370.3
J082	chrX	20195145	20204021	TRUE	OK	344.1	0.0048	0.09674	0.6957	0.206	0.103	370.7	208.5	340.4	427.9	331.0	385.8
J083	chrX	20204103	20209287	TRUE	OK	272.0	0.01	0.3825	0.8178	0.123	0.061	323.4	153.3	272.0	301.8	258.5	322.9
J084	chrX	20204103	20234757	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.168	0.7033	NA	NA	NA	1.0	1.0	1.0	1.0	3.9	0.0
J085	chrX	20209404	20218799	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J086	chrX	20209404	20234757	TRUE	OK	209.2	0.0201	0.2971	0.7908	0.206	0.103	237.6	99.1	221.6	276.0	194.9	226.2
J087	chrX	20234814	20235492	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J088	chrX	20234814	20240568	TRUE	OK	17.9	0.00736	0.0006152	0.1002	1.106	0.553	11.8	4.2	16.1	25.8	22.5	27.1
J089	chrX	20234814	20241592	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.165	0.9531	NA	NA	NA	2.0	0.0	0.0	1.0	1.0	0.0
J090	chrX	20234814	20266563	TRUE	OK	123.4	0.0115	0.7556	0.937	0.059	0.029	138.0	76.1	133.0	167.8	104.8	120.9
J091	chrX	20234814	20267038	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0375	0.3578	NA	NA	NA	3.9	3.1	2.0	3.0	1.0	1.9
J092	chrX	20235513	20240568	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J093	chrX	20240605	20241592	FALSE	LOW_COUNTS_INDEP_FILTER	7.9	0.0124	0.003605	NA	NA	NA	3.9	3.1	5.0	10.9	12.7	11.6
J094	chrX	20240669	20241592	FALSE	LOW_COUNTS_INDEP_FILTER	4.1	0.112	0.01852	NA	NA	NA	2.0	0.0	2.0	11.9	2.0	6.8
J095	chrX	20240669	20267038	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J096	chrX	20241686	20265498	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J097	chrX	20241686	20265922	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J098	chrX	20241686	20266563	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.017	0.05426	NA	NA	NA	6.9	1.0	4.0	7.9	9.8	8.7
J099	chrX	20241686	20267038	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.6141	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J100	chrX	20241686	20267382	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000177189.13
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE