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Normalized Counts Table (ENSG00000173166.18)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr2	203394344	203395089	TRUE	OK	245.6	0.0015	0.4499	0.8396	0.072	0.036	257.3	158.5	262.9	288.9	247.8	258.1
E002	chr2	203433681	203439436	TRUE	OK	2356.6	0.0127	0.1175	0.7137	-0.239	-0.119	2577.4	1828.9	2520.1	2662.7	2274.9	2275.9
E003	chr2	203439436	203441413	TRUE	OK	633.3	0.00663	0.1185	0.7148	0.184	0.092	682.3	323.2	688.9	762.5	672.8	670.0
E004	chr2	203441469	203442077	TRUE	OK	67.6	0.0171	0.1829	0.7502	0.278	0.139	80.9	22.9	68.5	85.4	73.4	74.4
E005	chr2	203442077	203442080	TRUE	OK	21.0	0.0144	0.8812	0.9714	-0.086	-0.043	30.6	8.3	22.2	23.8	23.5	17.4
E006	chr2	203444630	203444849	FALSE	LOW_COUNTS_INDEP_FILTER	5.3	0.0298	0.5231	NA	NA	NA	5.9	1.0	6.0	5.0	7.8	5.8
E007	chr2	203444849	203444867	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.048	0.6308	NA	NA	NA	2.0	3.1	4.0	3.0	2.9	1.9
E008	chr2	203444867	203445010	TRUE	OK	118.1	0.00811	0.6962	0.9187	0.033	0.017	137.1	58.4	135.0	122.1	123.4	132.5
E009	chr2	203447958	203448079	TRUE	OK	161.5	0.0101	0.3219	0.7986	0.141	0.070	172.6	75.1	187.3	175.7	174.3	183.7
E010	chr2	203448737	203448836	TRUE	OK	161.4	0.0215	0.4811	0.8497	0.094	0.047	180.4	64.6	197.4	178.7	156.7	190.5
E011	chr2	203454429	203454540	TRUE	OK	169.2	0.0157	0.5599	0.8747	0.076	0.038	200.2	77.2	189.4	190.6	151.8	205.9
E012	chr2	203455436	203455580	TRUE	OK	152.1	0.0141	0.6842	0.915	0.029	0.015	187.3	68.8	170.2	178.7	137.1	170.2
E013	chr2	203457529	203457595	TRUE	OK	112.0	0.0108	0.6321	0.8984	0.053	0.027	139.0	51.1	120.9	140.0	103.8	117.0
E014	chr2	203459906	203460028	TRUE	OK	141.5	0.0245	0.1998	0.7578	0.251	0.125	171.6	49.0	145.0	176.7	152.8	153.7
E015	chr2	203461248	203461408	TRUE	OK	160.2	0.00816	0.06391	0.6533	0.285	0.143	167.6	68.8	172.2	198.6	179.2	175.0
E016	chr2	203461847	203461925	TRUE	OK	127.4	0.00708	0.004767	0.2895	0.469	0.235	108.5	56.3	137.0	156.9	152.8	152.8
E017	chr2	203470238	203470313	TRUE	OK	11.2	0.0169	0.4262	0.8318	0.314	0.157	13.8	5.2	9.1	10.9	11.8	16.4
E018	chr2	203477075	203477156	TRUE	OK	12.4	0.126	0.6539	0.9057	-0.537	-0.268	20.7	1.0	20.1	15.9	9.8	6.8
E019	chr2	203489583	203489799	TRUE	OK	177.5	0.00345	0.01202	0.4156	0.323	0.161	183.4	88.6	174.2	240.3	179.2	199.2
E020	chr2	203489799	203490045	TRUE	OK	187.0	0.0229	0.2216	0.7653	0.240	0.120	228.8	71.9	185.3	240.3	174.3	221.4
E021	chr2	203490045	203490086	TRUE	OK	115.9	0.0182	0.245	0.774	0.213	0.106	143.0	44.8	115.8	138.0	117.5	136.3
E022	chr2	203490086	203490089	TRUE	OK	95.4	0.0284	0.1659	0.7424	0.313	0.157	117.3	30.2	92.7	116.2	98.9	117.0
E023	chr2	203491213	203491319	TRUE	OK	157.6	0.0104	0.3523	0.808	0.139	0.070	179.5	75.1	170.2	175.7	152.8	192.4
E024	chr2	203495162	203495233	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.865	0.6643	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
E025	chr2	203495233	203495353	TRUE	OK	149.3	0.00257	0.5015	0.8561	0.082	0.041	160.7	92.8	157.1	182.7	138.1	164.4
E026	chr2	203533364	203533433	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.154	0.2752	NA	NA	NA	0.0	1.0	0.0	1.0	2.0	1.0
E027	chr2	203535110	203535262	TRUE	OK	99.9	0.00387	0.1965	0.7564	-0.201	-0.100	112.4	76.1	114.8	114.2	78.3	103.5
E028	chr2	203535262	203535279	TRUE	OK	20.1	0.042	0.5629	0.8759	-0.225	-0.113	14.8	16.7	30.2	27.8	20.6	10.6
E029	chr2	203535279	203535301	TRUE	OK	15.2	0.101	0.4639	0.844	-0.358	-0.179	10.8	12.5	25.2	22.8	15.7	3.9
E030	chr2	203535301	203535335	TRUE	OK	13.5	0.121	0.3166	0.7964	-0.520	-0.260	11.8	11.5	22.2	19.9	13.7	1.9
J031	chr2	203395089	203444867	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J032	chr2	203441413	203444867	TRUE	OK	44.2	0.0124	0.8304	0.9578	0.016	0.008	52.3	19.8	52.4	40.7	47.0	53.2
J033	chr2	203442080	203444867	TRUE	OK	19.5	0.00681	0.9054	0.9774	-0.054	-0.027	25.6	8.3	22.2	22.8	20.6	17.4
J034	chr2	203445010	203447958	TRUE	OK	81.6	0.00469	0.6291	0.8974	0.059	0.030	97.6	40.7	87.6	86.4	86.2	90.9
J035	chr2	203448079	203448737	TRUE	OK	109.3	0.0123	0.2354	0.7709	0.211	0.105	103.5	50.1	133.0	118.1	119.5	131.5
J036	chr2	203448836	203454429	TRUE	OK	120.1	0.0202	0.4557	0.8413	0.119	0.060	139.0	48.0	139.0	140.0	109.7	145.0
J037	chr2	203454540	203455436	TRUE	OK	96.4	0.0171	0.9428	0.9865	-0.038	-0.019	122.3	43.8	110.8	105.2	81.3	115.1
J038	chr2	203455580	203457529	TRUE	OK	80.4	0.00703	0.7038	0.9209	0.046	0.023	102.5	40.7	80.6	95.3	73.4	89.9
J039	chr2	203457595	203459906	TRUE	OK	80.4	0.0147	0.4793	0.8492	0.110	0.055	102.5	32.3	83.6	100.3	77.4	86.0
J040	chr2	203460028	203461248	TRUE	OK	91.1	0.0443	0.2118	0.7622	0.307	0.154	112.4	24.0	93.7	120.1	98.9	97.7
J041	chr2	203461408	203461847	TRUE	OK	87.6	0.00595	0.01401	0.4379	0.432	0.216	70.0	44.8	95.7	103.3	102.8	109.3
J042	chr2	203461925	203470238	FALSE	LOW_COUNTS_INDEP_FILTER	7.6	0.0248	0.1606	NA	NA	NA	8.9	3.1	4.0	7.9	7.8	13.5
J043	chr2	203461925	203477075	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.0443	0.2953	NA	NA	NA	3.0	0.0	7.1	7.9	5.9	3.9
J044	chr2	203461925	203489583	TRUE	OK	71.6	0.00353	1.903e-05	0.009184	0.747	0.374	48.3	34.4	67.5	109.2	87.2	83.1
J045	chr2	203470313	203477075	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.0395	0.1103	NA	NA	NA	5.9	1.0	4.0	3.0	1.0	1.0
J046	chr2	203470313	203489583	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0217	0.6991	NA	NA	NA	3.0	4.2	4.0	5.0	4.9	4.8
J047	chr2	203477156	203489583	TRUE	OK	9.7	0.176	0.7133	0.9239	-0.631	-0.316	17.7	0.0	16.1	10.9	7.8	5.8
J048	chr2	203490086	203491213	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.263	0.7644	NA	NA	NA	1.0	0.0	4.0	0.0	2.9	1.0
J049	chr2	203490089	203491213	TRUE	OK	94.2	0.0284	0.1705	0.7443	0.314	0.157	114.4	30.2	92.7	115.2	96.0	117.0
J050	chr2	203491319	203495233	TRUE	OK	107.5	0.00244	0.4284	0.8325	0.100	0.050	118.3	60.5	114.8	123.1	103.8	124.7
J051	chr2	203495353	203533364	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J052	chr2	203495353	203535110	TRUE	OK	84.2	0.0031	0.4233	0.8309	-0.130	-0.065	96.6	59.4	93.7	97.3	66.6	91.8
N053	chr2	203391143	203394699	TRUE	OK	152.5	0.00143	0.4725	0.847	0.079	0.039	164.7	100.1	155.1	177.7	151.8	165.3
N054	chr2	203394846	203395655	TRUE	OK	119.8	0.00258	0.3373	0.8031	0.131	0.066	108.5	79.2	136.0	150.9	123.4	120.9
N055	chr2	203394846	203395658	TRUE	OK	10.2	0.0119	0.1654	0.742	0.561	0.281	6.9	3.1	13.1	13.9	12.7	11.6
N056	chr2	203395780	203402575	TRUE	OK	183.9	0.00128	0.2419	0.7728	0.123	0.062	184.4	121.0	193.4	227.3	186.1	191.4
N057	chr2	203402734	203411284	TRUE	OK	93.2	0.0314	0.899	0.9758	0.077	0.039	89.7	97.0	70.5	119.1	92.1	90.9
N058	chr2	203402734	203416907	TRUE	OK	83.2	0.00518	0.521	0.8626	-0.100	-0.050	80.9	71.9	91.7	98.3	83.2	73.5
N059	chr2	203411371	203416907	TRUE	OK	94.7	0.0193	0.6909	0.917	-0.067	-0.034	94.7	95.9	84.6	113.2	91.1	88.9
N060	chr2	203417081	203427176	TRUE	OK	181.4	0.0116	0.4833	0.8505	-0.109	-0.054	190.3	160.6	183.3	195.6	153.7	205.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000173166.18
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE