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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr11 | 85628572 | 85628584 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.0233 | 0.4766 | NA | NA | NA | 7.9 | 6.3 | 9.1 | 4.0 | 5.9 | 4.8 |
E002 | chr11 | 85628584 | 85628592 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.0 | 0.0202 | 0.4362 | NA | NA | NA | 9.9 | 9.4 | 10.1 | 4.0 | 5.9 | 8.7 |
E003 | chr11 | 85628592 | 85628596 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.0 | 0.018 | 0.6649 | NA | NA | NA | 11.8 | 9.4 | 10.1 | 6.9 | 5.9 | 9.7 |
E004 | chr11 | 85628596 | 85628601 | TRUE | OK | 14.6 | 0.0102 | 0.2133 | 0.7627 | 0.438 | 0.219 | 12.8 | 16.7 | 12.1 | 14.9 | 15.7 | 15.5 |
E005 | chr11 | 85628601 | 85628603 | TRUE | OK | 46.6 | 0.00713 | 0.02498 | 0.5251 | 0.505 | 0.253 | 38.5 | 46.9 | 44.3 | 39.7 | 55.8 | 54.1 |
E006 | chr11 | 85628603 | 85628604 | TRUE | OK | 73.2 | 0.00372 | 3.187e-05 | 0.01334 | 0.723 | 0.361 | 56.2 | 68.8 | 63.5 | 77.4 | 87.2 | 86.0 |
E007 | chr11 | 85628604 | 85628618 | TRUE | OK | 183.3 | 0.00393 | 0.0003503 | 0.07103 | 0.500 | 0.250 | 170.6 | 173.1 | 173.2 | 182.7 | 212.5 | 187.6 |
E008 | chr11 | 85628618 | 85628629 | TRUE | OK | 220.8 | 0.00493 | 0.001807 | 0.1807 | 0.454 | 0.227 | 201.1 | 207.5 | 225.6 | 220.4 | 248.7 | 221.4 |
E009 | chr11 | 85628629 | 85628688 | TRUE | OK | 584.3 | 0.00907 | 0.05316 | 0.6332 | 0.335 | 0.167 | 610.3 | 556.8 | 610.4 | 590.7 | 577.8 | 559.8 |
E010 | chr11 | 85629131 | 85629203 | TRUE | OK | 85.5 | 0.0152 | 0.5527 | 0.8726 | -0.138 | -0.069 | 89.7 | 85.5 | 117.8 | 89.4 | 66.6 | 63.8 |
E011 | chr11 | 85629203 | 85629262 | TRUE | OK | 83.0 | 0.00698 | 0.2687 | 0.7819 | -0.206 | -0.103 | 92.7 | 91.8 | 105.8 | 80.4 | 60.7 | 66.7 |
E012 | chr11 | 85631144 | 85631316 | TRUE | OK | 467.4 | 0.0103 | 0.1613 | 0.7396 | 0.263 | 0.132 | 476.2 | 445.2 | 518.7 | 463.6 | 493.6 | 407.0 |
E013 | chr11 | 85631686 | 85631791 | TRUE | OK | 802.9 | 0.00829 | 0.1841 | 0.7505 | 0.223 | 0.112 | 872.6 | 850.9 | 805.8 | 819.1 | 722.7 | 746.4 |
E014 | chr11 | 85631791 | 85631808 | TRUE | OK | 616.7 | 0.00825 | 0.2726 | 0.783 | 0.184 | 0.092 | 674.4 | 667.3 | 606.3 | 626.5 | 532.7 | 592.7 |
E015 | chr11 | 85634085 | 85634176 | TRUE | OK | 769.4 | 0.00843 | 0.9756 | 0.994 | 0.008 | 0.004 | 879.5 | 897.8 | 753.4 | 730.7 | 654.2 | 701.0 |
E016 | chr11 | 85634176 | 85634279 | TRUE | OK | 655.4 | 0.0048 | 0.7676 | 0.9405 | -0.041 | -0.021 | 726.7 | 821.7 | 630.5 | 582.8 | 586.6 | 584.0 |
E017 | chr11 | 85634279 | 85635087 | TRUE | OK | 59.7 | 0.00401 | 0.1476 | 0.7338 | 0.268 | 0.134 | 50.3 | 75.1 | 55.4 | 59.6 | 60.7 | 57.0 |
E018 | chr11 | 85635666 | 85635760 | TRUE | OK | 574.4 | 0.00108 | 0.1029 | 0.7008 | -0.130 | -0.065 | 600.5 | 736.2 | 612.4 | 512.3 | 512.2 | 472.8 |
E019 | chr11 | 85635760 | 85635778 | TRUE | OK | 473.2 | 0.00181 | 0.3511 | 0.8077 | -0.088 | -0.044 | 476.2 | 602.7 | 513.7 | 417.0 | 447.5 | 381.9 |
E020 | chr11 | 85635778 | 85636045 | TRUE | OK | 49.8 | 0.0126 | 0.2214 | 0.7652 | 0.290 | 0.145 | 31.6 | 67.8 | 50.4 | 51.6 | 53.9 | 43.5 |
E021 | chr11 | 85636045 | 85636128 | TRUE | OK | 640.0 | 0.0011 | 0.01495 | 0.4475 | -0.192 | -0.096 | 678.4 | 833.1 | 685.9 | 565.9 | 563.1 | 513.4 |
E022 | chr11 | 85636128 | 85636159 | TRUE | OK | 451.2 | 0.0022 | 0.003165 | 0.24 | -0.299 | -0.149 | 483.1 | 621.5 | 491.5 | 398.1 | 352.5 | 360.6 |
E023 | chr11 | 85636159 | 85636210 | TRUE | OK | 495.5 | 0.00836 | 0.04693 | 0.6166 | -0.341 | -0.170 | 501.9 | 736.2 | 527.8 | 444.8 | 362.3 | 400.3 |
E024 | chr11 | 85636210 | 85636502 | TRUE | OK | 515.3 | 0.00641 | 0.01031 | 0.396 | -0.393 | -0.196 | 531.5 | 776.8 | 546.9 | 437.8 | 397.6 | 401.2 |
E025 | chr11 | 85636502 | 85636507 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.0196 | 0.1424 | NA | NA | NA | 4.9 | 7.3 | 10.1 | 10.9 | 11.8 | 6.8 |
E026 | chr11 | 85636507 | 85636510 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.4 | 0.0195 | 0.02825 | NA | NA | NA | 4.9 | 5.2 | 6.0 | 10.9 | 10.8 | 6.8 |
E027 | chr11 | 85636510 | 85636536 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.0213 | 0.01266 | NA | NA | NA | 3.0 | 5.2 | 6.0 | 10.9 | 10.8 | 6.8 |
E028 | chr11 | 85636536 | 85636539 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.18 | 0.1096 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 3.0 | 2.0 | 0.0 |
J029 | chr11 | 85628688 | 85629131 | TRUE | OK | 60.3 | 0.0263 | 0.577 | 0.8805 | -0.154 | -0.077 | 69.0 | 55.3 | 83.6 | 66.5 | 51.9 | 35.8 |
J030 | chr11 | 85628688 | 85631144 | TRUE | OK | 246.9 | 0.0102 | 0.06384 | 0.6533 | 0.350 | 0.175 | 248.5 | 216.9 | 268.9 | 244.2 | 260.5 | 242.7 |
J031 | chr11 | 85628688 | 85631686 | TRUE | OK | 238.3 | 0.00521 | 0.01274 | 0.4232 | 0.366 | 0.183 | 249.5 | 232.5 | 222.6 | 252.2 | 227.2 | 245.6 |
J032 | chr11 | 85628688 | 85634085 | TRUE | OK | 22.8 | 0.0112 | 0.4198 | 0.8301 | -0.254 | -0.127 | 30.6 | 33.4 | 17.1 | 18.9 | 16.6 | 20.3 |
J033 | chr11 | 85629203 | 85631686 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.7 | 0.02 | 0.1721 | NA | NA | NA | 4.9 | 8.3 | 6.0 | 4.0 | 2.9 | 1.9 |
J034 | chr11 | 85629262 | 85631144 | TRUE | OK | 20.9 | 0.0124 | 0.1197 | 0.7157 | -0.497 | -0.248 | 21.7 | 25.0 | 32.2 | 20.8 | 14.7 | 10.6 |
J035 | chr11 | 85629262 | 85631686 | TRUE | OK | 32.5 | 0.00434 | 0.2757 | 0.7835 | -0.259 | -0.130 | 37.5 | 46.9 | 31.2 | 28.8 | 24.5 | 26.1 |
J036 | chr11 | 85631316 | 85631686 | TRUE | OK | 260.0 | 0.00542 | 0.1497 | 0.7346 | 0.215 | 0.108 | 278.1 | 254.4 | 273.0 | 253.2 | 259.5 | 241.7 |
J037 | chr11 | 85631808 | 85634085 | TRUE | OK | 541.1 | 0.00702 | 0.5027 | 0.8565 | 0.108 | 0.054 | 603.4 | 595.4 | 538.9 | 539.1 | 462.2 | 507.6 |
J038 | chr11 | 85634176 | 85635666 | TRUE | OK | 13.2 | 0.008 | 0.9567 | 0.9899 | -0.019 | -0.009 | 13.8 | 17.7 | 12.1 | 13.9 | 10.8 | 10.6 |
J039 | chr11 | 85634279 | 85635666 | TRUE | OK | 370.4 | 0.00259 | 0.3521 | 0.808 | -0.107 | -0.054 | 387.5 | 500.5 | 366.6 | 321.7 | 323.2 | 322.9 |
J040 | chr11 | 85635778 | 85636045 | TRUE | OK | 385.6 | 0.00141 | 0.5801 | 0.8813 | -0.047 | -0.024 | 406.2 | 457.8 | 422.0 | 342.5 | 368.2 | 317.1 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000171204.12 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |