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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr2 | 85539167 | 85539378 | TRUE | OK | 1760.0 | 0.0133 | 0.4567 | 0.8417 | 0.113 | 0.057 | 2506.4 | 1578.7 | 2631.9 | 1288.6 | 1195.7 | 1358.4 |
E002 | chr2 | 85539603 | 85539641 | TRUE | OK | 22.8 | 0.0396 | 0.009692 | 0.388 | 1.034 | 0.517 | 20.7 | 10.4 | 34.2 | 18.9 | 20.6 | 31.9 |
E003 | chr2 | 85539641 | 85539672 | TRUE | OK | 23.6 | 0.0246 | 0.004569 | 0.284 | 1.006 | 0.503 | 20.7 | 14.6 | 33.2 | 16.9 | 23.5 | 32.9 |
E004 | chr2 | 85539672 | 85540000 | TRUE | OK | 59.7 | 0.00818 | 2.031e-05 | 0.009681 | 0.908 | 0.454 | 66.1 | 41.7 | 71.5 | 48.6 | 66.6 | 63.8 |
E005 | chr2 | 85541082 | 85541160 | TRUE | OK | 1734.5 | 0.0114 | 0.7559 | 0.9372 | 0.034 | 0.017 | 2473.9 | 1650.6 | 2615.8 | 1219.1 | 1098.8 | 1348.7 |
E006 | chr2 | 85541160 | 85541254 | TRUE | OK | 71.3 | 0.0167 | 0.6011 | 0.8884 | -0.163 | -0.081 | 121.3 | 63.6 | 104.8 | 43.7 | 41.1 | 53.2 |
E007 | chr2 | 85541254 | 85541377 | TRUE | OK | 2268.6 | 0.00881 | 0.8474 | 0.9625 | -0.048 | -0.024 | 3170.0 | 2307.5 | 3498.1 | 1581.5 | 1405.3 | 1649.4 |
E008 | chr2 | 85541377 | 85541454 | TRUE | OK | 117.8 | 0.00728 | 0.09338 | 0.6919 | 0.286 | 0.143 | 142.0 | 106.4 | 180.3 | 90.3 | 95.0 | 92.8 |
E009 | chr2 | 85541454 | 85541481 | TRUE | OK | 80.4 | 0.00696 | 0.1979 | 0.7568 | 0.236 | 0.118 | 96.6 | 74.0 | 125.9 | 60.6 | 58.8 | 66.7 |
E010 | chr2 | 85541481 | 85541632 | TRUE | OK | 158.9 | 0.0148 | 0.7756 | 0.943 | 0.040 | 0.020 | 208.0 | 148.1 | 259.9 | 127.1 | 113.6 | 96.7 |
E011 | chr2 | 85541632 | 85541656 | TRUE | OK | 1718.0 | 0.0087 | 0.7233 | 0.9271 | 0.037 | 0.019 | 2351.6 | 1699.6 | 2619.8 | 1228.1 | 1104.6 | 1304.3 |
E012 | chr2 | 85541656 | 85541745 | TRUE | OK | 2150.8 | 0.00752 | 0.8239 | 0.9562 | 0.015 | 0.008 | 2985.6 | 2168.9 | 3239.2 | 1503.1 | 1402.3 | 1605.9 |
E013 | chr2 | 85541828 | 85541972 | TRUE | OK | 2419.3 | 0.0045 | 0.3172 | 0.7966 | 0.102 | 0.051 | 3229.2 | 2506.7 | 3529.3 | 1725.5 | 1737.2 | 1787.7 |
E014 | chr2 | 85541972 | 85542129 | TRUE | OK | 139.8 | 0.0104 | 0.001602 | 0.1705 | 0.605 | 0.303 | 151.8 | 111.6 | 200.4 | 106.2 | 134.2 | 134.4 |
E015 | chr2 | 85542154 | 85542373 | TRUE | OK | 3664.5 | 0.00418 | 0.7673 | 0.9404 | 0.022 | 0.011 | 5036.5 | 3935.2 | 5315.1 | 2531.6 | 2517.7 | 2651.1 |
E016 | chr2 | 85542373 | 85542564 | TRUE | OK | 374.8 | 0.00649 | 0.006703 | 0.3335 | 0.384 | 0.192 | 447.6 | 338.9 | 542.9 | 294.9 | 295.7 | 328.7 |
E017 | chr2 | 85542564 | 85542747 | TRUE | OK | 3551.8 | 0.00461 | 0.5154 | 0.8609 | -0.084 | -0.042 | 5049.4 | 3926.9 | 5165.0 | 2392.6 | 2262.1 | 2514.7 |
E018 | chr2 | 85542900 | 85543034 | TRUE | OK | 2508.2 | 0.00651 | 0.4107 | 0.8273 | -0.123 | -0.062 | 3719.2 | 2740.3 | 3616.9 | 1701.6 | 1539.4 | 1731.6 |
E019 | chr2 | 85543034 | 85543218 | TRUE | OK | 1701.9 | 0.0116 | 0.0002826 | 0.06255 | 0.673 | 0.336 | 1952.3 | 1520.3 | 2148.4 | 1167.5 | 1605.0 | 1817.7 |
E020 | chr2 | 85543218 | 85543608 | TRUE | OK | 2504.4 | 0.0083 | 6.819e-05 | 0.0238 | 0.625 | 0.312 | 2771.7 | 2449.3 | 3225.1 | 1745.3 | 2242.6 | 2592.1 |
E021 | chr2 | 85543669 | 85545281 | TRUE | OK | 11691.7 | 0.0116 | 0.04185 | 0.6003 | -0.353 | -0.176 | 15218.1 | 16373.8 | 15997.7 | 7321.8 | 7486.6 | 7752.1 |
J022 | chr2 | 85539378 | 85541082 | TRUE | OK | 1309.0 | 0.012 | 0.5719 | 0.8788 | 0.079 | 0.039 | 1860.6 | 1205.4 | 1967.1 | 928.3 | 858.8 | 1033.5 |
J023 | chr2 | 85539672 | 85541082 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J024 | chr2 | 85540000 | 85541082 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0614 | 0.607 | NA | NA | NA | 3.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.9 |
J025 | chr2 | 85541160 | 85541254 | TRUE | OK | 1125.4 | 0.00934 | 0.4432 | 0.8373 | -0.134 | -0.067 | 1634.8 | 1198.1 | 1707.2 | 773.4 | 623.8 | 815.0 |
J026 | chr2 | 85541377 | 85541632 | TRUE | OK | 1513.5 | 0.00778 | 0.7455 | 0.9341 | 0.031 | 0.015 | 2047.0 | 1509.9 | 2328.7 | 1070.2 | 979.3 | 1145.7 |
J027 | chr2 | 85541745 | 85541828 | TRUE | OK | 1166.0 | 0.00458 | 0.8189 | 0.9549 | 0.015 | 0.008 | 1581.6 | 1228.3 | 1739.5 | 830.0 | 767.8 | 848.9 |
J028 | chr2 | 85541972 | 85542154 | TRUE | OK | 1634.6 | 0.00408 | 0.215 | 0.7632 | 0.125 | 0.063 | 2209.6 | 1668.4 | 2341.8 | 1150.6 | 1193.7 | 1243.4 |
J029 | chr2 | 85542373 | 85542564 | TRUE | OK | 1705.0 | 0.00303 | 0.272 | 0.7829 | -0.112 | -0.056 | 2390.1 | 1947.8 | 2501.9 | 1144.7 | 1049.8 | 1196.0 |
J030 | chr2 | 85542747 | 85542900 | TRUE | OK | 1468.8 | 0.00574 | 0.08174 | 0.6795 | -0.236 | -0.118 | 2233.3 | 1676.7 | 2138.3 | 964.0 | 848.1 | 952.3 |
J031 | chr2 | 85543034 | 85543669 | TRUE | OK | 1094.3 | 0.0186 | 0.0144 | 0.4429 | -0.545 | -0.272 | 1706.8 | 1412.9 | 1668.0 | 746.6 | 455.4 | 576.2 |
N032 | chr2 | 85542747 | 85542966 | TRUE | OK | 14.4 | 0.0749 | 0.9337 | 0.9844 | -0.055 | -0.027 | 24.7 | 9.4 | 23.2 | 14.9 | 3.9 | 10.6 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000168906.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |