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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr14 | 94081300 | 94081309 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.211 | 0.4276 | NA | NA | NA | 2.0 | 1.0 | 1.0 | 0.0 | 2.9 | 0.0 |
E002 | chr14 | 94081309 | 94081310 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.149 | 0.2553 | NA | NA | NA | 2.0 | 1.0 | 1.0 | 0.0 | 2.0 | 0.0 |
E003 | chr14 | 94081310 | 94081328 | TRUE | OK | 11.0 | 0.0134 | 0.4129 | 0.8281 | -0.332 | -0.166 | 10.8 | 13.6 | 7.1 | 9.9 | 11.8 | 12.6 |
E004 | chr14 | 94081328 | 94081355 | TRUE | OK | 22.4 | 0.00788 | 0.5446 | 0.8701 | 0.178 | 0.089 | 16.8 | 24.0 | 12.1 | 26.8 | 26.4 | 28.0 |
E005 | chr14 | 94081355 | 94081364 | TRUE | OK | 38.7 | 0.00584 | 0.8453 | 0.962 | 0.050 | 0.025 | 34.5 | 38.6 | 23.2 | 41.7 | 49.9 | 44.5 |
E006 | chr14 | 94081364 | 94081374 | TRUE | OK | 54.3 | 0.00554 | 0.7923 | 0.9477 | 0.054 | 0.027 | 47.3 | 56.3 | 31.2 | 62.5 | 66.6 | 61.9 |
E007 | chr14 | 94081374 | 94081381 | TRUE | OK | 91.7 | 0.00327 | 0.3961 | 0.8225 | 0.139 | 0.069 | 68.0 | 94.9 | 58.4 | 103.3 | 117.5 | 108.3 |
E008 | chr14 | 94081381 | 94081386 | TRUE | OK | 101.0 | 0.00338 | 0.5505 | 0.872 | 0.095 | 0.048 | 78.9 | 105.3 | 63.5 | 112.2 | 128.3 | 118.0 |
E009 | chr14 | 94081386 | 94081395 | TRUE | OK | 145.0 | 0.00556 | 0.8967 | 0.9753 | 0.016 | 0.008 | 119.3 | 153.3 | 92.7 | 166.8 | 176.3 | 161.5 |
E010 | chr14 | 94081395 | 94081449 | TRUE | OK | 183.4 | 0.0066 | 0.8079 | 0.952 | 0.027 | 0.013 | 147.9 | 200.2 | 112.8 | 210.5 | 217.4 | 211.7 |
E011 | chr14 | 94088247 | 94088303 | TRUE | OK | 12.4 | 0.0116 | 0.5342 | 0.8669 | -0.236 | -0.118 | 10.8 | 14.6 | 9.1 | 12.9 | 13.7 | 13.5 |
E012 | chr14 | 94089043 | 94089299 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.9 | 0.0308 | 0.00988 | NA | NA | NA | 3.0 | 0.0 | 2.0 | 6.9 | 8.8 | 8.7 |
E013 | chr14 | 94094749 | 94094899 | TRUE | OK | 13.6 | 0.0155 | 0.3216 | 0.7985 | -0.367 | -0.183 | 16.8 | 11.5 | 11.1 | 13.9 | 12.7 | 15.5 |
E014 | chr14 | 94096840 | 94096855 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0997 | 0.643 | NA | NA | NA | 3.0 | 5.2 | 2.0 | 6.9 | 1.0 | 2.9 |
E015 | chr14 | 94096855 | 94096886 | TRUE | OK | 64.3 | 0.0111 | 0.2642 | 0.7805 | -0.258 | -0.129 | 70.0 | 66.7 | 41.3 | 61.6 | 73.4 | 72.5 |
E016 | chr14 | 94096886 | 94096906 | TRUE | OK | 206.6 | 0.0135 | 0.8851 | 0.9723 | -0.062 | -0.031 | 170.6 | 236.7 | 124.9 | 243.2 | 226.2 | 237.8 |
E017 | chr14 | 94096906 | 94096965 | TRUE | OK | 274.1 | 0.0118 | 0.654 | 0.9057 | 0.073 | 0.036 | 217.9 | 293.0 | 171.2 | 315.7 | 297.7 | 349.0 |
E018 | chr14 | 94097491 | 94097494 | TRUE | OK | 19.5 | 0.0105 | 0.1995 | 0.7576 | 0.418 | 0.209 | 9.9 | 21.9 | 10.1 | 19.9 | 24.5 | 30.9 |
E019 | chr14 | 94097494 | 94097678 | TRUE | OK | 104.1 | 0.00376 | 0.00808 | 0.3622 | 0.440 | 0.220 | 59.2 | 93.8 | 72.5 | 122.1 | 131.2 | 146.0 |
E020 | chr14 | 94100738 | 94100771 | TRUE | OK | 207.8 | 0.0224 | 0.8242 | 0.9563 | -0.043 | -0.022 | 165.6 | 213.8 | 153.1 | 236.3 | 186.1 | 292.0 |
E021 | chr14 | 94100771 | 94101348 | TRUE | OK | 79.9 | 0.0221 | 0.05319 | 0.6332 | 0.617 | 0.308 | 52.3 | 51.1 | 56.4 | 72.5 | 113.6 | 133.4 |
E022 | chr14 | 94101813 | 94101975 | TRUE | OK | 317.3 | 0.00891 | 0.001935 | 0.1869 | -0.589 | -0.294 | 276.1 | 391.0 | 235.7 | 327.6 | 318.3 | 354.8 |
E023 | chr14 | 94101975 | 94102059 | TRUE | OK | 69.1 | 0.00972 | 0.5757 | 0.88 | -0.137 | -0.068 | 57.2 | 87.6 | 39.3 | 58.6 | 87.2 | 85.1 |
E024 | chr14 | 94102476 | 94102536 | TRUE | OK | 216.1 | 0.00826 | 0.001361 | 0.1567 | -0.604 | -0.301 | 167.6 | 286.7 | 183.3 | 220.4 | 215.4 | 223.3 |
E025 | chr14 | 94102536 | 94102541 | TRUE | OK | 151.4 | 0.00457 | 1.272e-05 | 0.006724 | -0.699 | -0.349 | 124.2 | 208.5 | 135.0 | 144.0 | 146.9 | 149.9 |
E026 | chr14 | 94102541 | 94102641 | TRUE | OK | 151.3 | 0.00539 | 4.504e-05 | 0.01748 | -0.687 | -0.343 | 123.3 | 210.6 | 131.9 | 143.0 | 156.7 | 142.1 |
E027 | chr14 | 94102641 | 94102708 | TRUE | OK | 68.2 | 0.00371 | 0.027 | 0.5376 | -0.398 | -0.199 | 54.2 | 82.4 | 61.4 | 59.6 | 75.4 | 76.4 |
E028 | chr14 | 94102708 | 94102709 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.5 | 0.177 | 0.9759 | NA | NA | NA | 3.9 | 4.2 | 2.0 | 0.0 | 10.8 | 5.8 |
E029 | chr14 | 94103502 | 94103846 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.0507 | 0.8188 | NA | NA | NA | 0.0 | 6.3 | 3.0 | 3.0 | 5.9 | 4.8 |
J030 | chr14 | 94081449 | 94088247 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0117 | 0.3371 | NA | NA | NA | 9.9 | 11.5 | 6.0 | 6.0 | 10.8 | 11.6 |
J031 | chr14 | 94081449 | 94094749 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0531 | 0.2823 | NA | NA | NA | 1.0 | 4.2 | 2.0 | 0.0 | 2.9 | 1.9 |
J032 | chr14 | 94081449 | 94096840 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0754 | 0.6819 | NA | NA | NA | 1.0 | 3.1 | 0.0 | 2.0 | 1.0 | 1.0 |
J033 | chr14 | 94081449 | 94096855 | TRUE | OK | 51.3 | 0.0109 | 0.5107 | 0.8595 | -0.159 | -0.079 | 54.2 | 54.2 | 29.2 | 46.7 | 62.7 | 60.9 |
J034 | chr14 | 94081449 | 94096886 | TRUE | OK | 116.4 | 0.0115 | 0.4112 | 0.8274 | 0.157 | 0.079 | 80.9 | 127.2 | 71.5 | 153.9 | 134.2 | 130.5 |
J035 | chr14 | 94088303 | 94089043 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.206 | 0.198 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.9 |
J036 | chr14 | 94088303 | 94096886 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0323 | 0.442 | NA | NA | NA | 2.0 | 10.4 | 3.0 | 4.0 | 4.9 | 5.8 |
J037 | chr14 | 94094899 | 94096855 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.718 | 0.4826 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 1.0 | 0.0 | 0.0 |
J038 | chr14 | 94096965 | 94097491 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.5 | 0.147 | 0.591 | NA | NA | NA | 1.0 | 13.6 | 3.0 | 8.9 | 4.9 | 13.5 |
J039 | chr14 | 94096965 | 94097494 | TRUE | OK | 31.8 | 0.00529 | 0.05346 | 0.6338 | 0.486 | 0.243 | 18.7 | 31.3 | 16.1 | 42.7 | 37.2 | 44.5 |
J040 | chr14 | 94096965 | 94100738 | TRUE | OK | 133.9 | 0.0231 | 0.4249 | 0.8313 | -0.201 | -0.101 | 114.4 | 147.0 | 99.7 | 146.9 | 108.7 | 186.6 |
J041 | chr14 | 94096965 | 94102476 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0746 | 0.2243 | NA | NA | NA | 2.0 | 5.2 | 2.0 | 4.0 | 2.0 | 0.0 |
J042 | chr14 | 94096965 | 94103502 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J043 | chr14 | 94097678 | 94100738 | TRUE | OK | 33.3 | 0.0163 | 0.9322 | 0.984 | -0.027 | -0.014 | 19.7 | 37.5 | 28.2 | 41.7 | 28.4 | 44.5 |
J044 | chr14 | 94100771 | 94101813 | TRUE | OK | 147.4 | 0.0295 | 0.3313 | 0.8013 | -0.285 | -0.142 | 131.1 | 166.8 | 108.8 | 174.7 | 113.6 | 189.5 |
J045 | chr14 | 94100771 | 94102476 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.1 | 0.0338 | 0.7225 | NA | NA | NA | 2.0 | 2.1 | 3.0 | 5.0 | 2.0 | 4.8 |
J046 | chr14 | 94101975 | 94102476 | TRUE | OK | 127.4 | 0.00731 | 0.00167 | 0.1739 | -0.599 | -0.299 | 106.5 | 175.2 | 104.8 | 134.0 | 123.4 | 120.9 |
J047 | chr14 | 94102059 | 94102476 | TRUE | OK | 24.8 | 0.0059 | 0.2194 | 0.7646 | -0.342 | -0.171 | 17.7 | 35.5 | 18.1 | 22.8 | 24.5 | 30.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000165948.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |