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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr17 | 44353214 | 44355191 | TRUE | OK | 350.0 | 0.0121 | 0.006982 | 0.3394 | -0.533 | -0.266 | 366.8 | 427.5 | 335.4 | 384.2 | 376.0 | 209.8 |
E002 | chr17 | 44355714 | 44355841 | TRUE | OK | 106.4 | 0.0615 | 0.4343 | 0.8342 | 0.319 | 0.160 | 94.7 | 100.1 | 94.7 | 97.3 | 100.9 | 150.8 |
E003 | chr17 | 44355957 | 44355966 | TRUE | OK | 63.4 | 0.0555 | 0.656 | 0.9063 | 0.183 | 0.092 | 62.1 | 57.3 | 59.4 | 53.6 | 58.8 | 88.9 |
E004 | chr17 | 44355966 | 44356074 | TRUE | OK | 87.3 | 0.037 | 0.7782 | 0.9439 | 0.070 | 0.035 | 85.8 | 88.6 | 81.6 | 79.4 | 82.3 | 106.4 |
E005 | chr17 | 44356172 | 44356305 | TRUE | OK | 92.1 | 0.0243 | 0.6053 | 0.8897 | 0.110 | 0.055 | 77.9 | 107.4 | 81.6 | 84.4 | 98.9 | 102.5 |
E006 | chr17 | 44356305 | 44356352 | TRUE | OK | 66.9 | 0.00684 | 0.08973 | 0.6889 | 0.335 | 0.167 | 46.3 | 76.1 | 57.4 | 81.4 | 78.3 | 61.9 |
E007 | chr17 | 44356429 | 44356588 | TRUE | OK | 104.5 | 0.00817 | 0.001109 | 0.1399 | 0.621 | 0.310 | 75.9 | 102.2 | 79.6 | 134.0 | 124.4 | 111.2 |
E008 | chr17 | 44358944 | 44359061 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.6 | 0.0173 | 0.01368 | NA | NA | NA | 4.9 | 5.2 | 8.1 | 12.9 | 13.7 | 12.6 |
E009 | chr17 | 44359061 | 44359143 | TRUE | OK | 10.2 | 0.043 | 0.4089 | 0.8268 | 0.424 | 0.212 | 7.9 | 6.3 | 12.1 | 6.9 | 16.6 | 11.6 |
E010 | chr17 | 44359345 | 44359578 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.291 | 0.2286 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 4.0 | 1.0 | 0.0 |
E011 | chr17 | 44359578 | 44359671 | TRUE | OK | 90.9 | 0.00525 | 2.627e-06 | 0.001879 | 0.845 | 0.422 | 72.0 | 70.9 | 62.4 | 115.2 | 125.3 | 99.6 |
E012 | chr17 | 44359904 | 44360132 | TRUE | OK | 125.7 | 0.00412 | 0.02332 | 0.5146 | 0.363 | 0.181 | 119.3 | 108.4 | 110.8 | 145.9 | 161.6 | 108.3 |
E013 | chr17 | 44363596 | 44363800 | TRUE | OK | 57.7 | 0.0316 | 0.1073 | 0.705 | -0.468 | -0.234 | 68.0 | 56.3 | 73.5 | 63.5 | 63.7 | 21.3 |
E014 | chr17 | 44363800 | 44363812 | TRUE | OK | 25.0 | 0.168 | 0.07308 | 0.6677 | -0.996 | -0.498 | 33.5 | 26.1 | 39.3 | 27.8 | 22.5 | 1.0 |
E015 | chr17 | 44363812 | 44363834 | TRUE | OK | 19.6 | 0.113 | 0.01306 | 0.4272 | -1.374 | -0.687 | 25.6 | 24.0 | 34.2 | 20.8 | 11.8 | 1.0 |
E016 | chr17 | 44363834 | 44363875 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.7 | 0.0727 | 0.006473 | NA | NA | NA | 10.8 | 8.3 | 16.1 | 6.9 | 3.9 | 0.0 |
J017 | chr17 | 44355191 | 44355714 | TRUE | OK | 62.7 | 0.0485 | 0.3987 | 0.8236 | 0.322 | 0.161 | 53.2 | 58.4 | 57.4 | 64.5 | 55.8 | 87.0 |
J018 | chr17 | 44355841 | 44355957 | TRUE | OK | 60.9 | 0.0542 | 0.583 | 0.8822 | 0.220 | 0.110 | 60.1 | 52.1 | 57.4 | 53.6 | 57.8 | 84.1 |
J019 | chr17 | 44356074 | 44356172 | TRUE | OK | 53.6 | 0.0271 | 0.9527 | 0.9891 | -0.052 | -0.026 | 53.2 | 63.6 | 46.3 | 44.7 | 52.9 | 60.9 |
J020 | chr17 | 44356352 | 44356429 | TRUE | OK | 54.1 | 0.00384 | 0.1888 | 0.7531 | 0.253 | 0.126 | 40.4 | 61.5 | 47.3 | 66.5 | 61.7 | 47.4 |
J021 | chr17 | 44356588 | 44358944 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.0745 | 0.03088 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 6.9 | 2.0 | 3.9 |
J022 | chr17 | 44356588 | 44359061 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.175 | 0.5674 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 |
J023 | chr17 | 44356588 | 44359578 | TRUE | OK | 52.7 | 0.00961 | 9.839e-06 | 0.005449 | 1.040 | 0.520 | 33.5 | 41.7 | 32.2 | 75.5 | 66.6 | 66.7 |
J024 | chr17 | 44359143 | 44359578 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0213 | 0.672 | NA | NA | NA | 5.9 | 5.2 | 7.1 | 3.0 | 8.8 | 3.9 |
J025 | chr17 | 44359671 | 44359904 | TRUE | OK | 63.3 | 0.00398 | 8.596e-06 | 0.004845 | 0.846 | 0.423 | 52.3 | 43.8 | 44.3 | 81.4 | 90.1 | 67.7 |
J026 | chr17 | 44360132 | 44363596 | TRUE | OK | 46.1 | 0.0148 | 0.09089 | 0.6898 | -0.428 | -0.214 | 51.3 | 45.9 | 59.4 | 45.7 | 52.9 | 21.3 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000161682.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |