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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr8 | 102826307 | 102827822 | TRUE | OK | 3811.3 | 0.00955 | 0.3229 | 0.7988 | -0.159 | -0.079 | 4060.4 | 4649.5 | 3918.1 | 3733.9 | 3127.8 | 3378.1 |
E002 | chr8 | 102827822 | 102828546 | TRUE | OK | 4274.1 | 0.00507 | 0.6506 | 0.9046 | -0.051 | -0.026 | 4691.4 | 4787.1 | 4304.9 | 4177.7 | 3671.3 | 4012.4 |
E003 | chr8 | 102828546 | 102828678 | TRUE | OK | 2013.8 | 0.00205 | 0.1169 | 0.7135 | -0.125 | -0.062 | 2413.7 | 2115.7 | 2113.2 | 1979.6 | 1640.3 | 1820.6 |
E004 | chr8 | 102829271 | 102829486 | TRUE | OK | 2486.6 | 0.00229 | 0.07773 | 0.6747 | -0.149 | -0.074 | 3071.4 | 2477.5 | 2697.3 | 2434.3 | 2004.6 | 2234.4 |
E005 | chr8 | 102829820 | 102829936 | TRUE | OK | 2077.4 | 0.00304 | 0.9335 | 0.9843 | 0.002 | 0.001 | 2468.0 | 1881.1 | 2262.2 | 2014.4 | 1787.2 | 2051.6 |
E006 | chr8 | 102830125 | 102830227 | TRUE | OK | 13.9 | 0.0133 | 0.8491 | 0.963 | 0.064 | 0.032 | 14.8 | 9.4 | 19.1 | 13.9 | 10.8 | 15.5 |
E007 | chr8 | 102833055 | 102833218 | TRUE | OK | 2206.9 | 0.00285 | 0.5992 | 0.8877 | -0.054 | -0.027 | 2688.8 | 2059.4 | 2388.1 | 2111.7 | 1865.5 | 2128.0 |
E008 | chr8 | 102834188 | 102834234 | TRUE | OK | 1723.9 | 0.00271 | 0.9163 | 0.9803 | -0.014 | -0.007 | 2039.1 | 1581.8 | 1890.6 | 1675.8 | 1457.2 | 1698.7 |
E009 | chr8 | 102834234 | 102834260 | TRUE | OK | 1452.8 | 0.00297 | 0.9479 | 0.9877 | -0.011 | -0.005 | 1716.6 | 1325.3 | 1598.5 | 1405.8 | 1224.1 | 1446.4 |
E010 | chr8 | 102834260 | 102834263 | TRUE | OK | 1271.8 | 0.00253 | 0.9366 | 0.9851 | 0.004 | 0.002 | 1500.7 | 1166.8 | 1376.9 | 1262.8 | 1069.4 | 1254.0 |
E011 | chr8 | 102834665 | 102834747 | TRUE | OK | 1749.5 | 0.00288 | 0.9856 | 0.9965 | -0.002 | -0.001 | 2069.6 | 1591.2 | 1912.7 | 1770.1 | 1464.0 | 1689.1 |
E012 | chr8 | 102834747 | 102835475 | TRUE | OK | 23.6 | 0.00944 | 0.817 | 0.9543 | -0.072 | -0.036 | 21.7 | 22.9 | 32.2 | 19.9 | 24.5 | 20.3 |
E013 | chr8 | 102836245 | 102836255 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0309 | 0.1599 | NA | NA | NA | 6.9 | 7.3 | 6.0 | 4.0 | 4.9 | 1.0 |
E014 | chr8 | 102836255 | 102836390 | TRUE | OK | 2184.7 | 0.00469 | 0.2707 | 0.7824 | 0.119 | 0.059 | 2539.0 | 1822.7 | 2358.9 | 2273.5 | 1940.9 | 2173.4 |
E015 | chr8 | 102836390 | 102836541 | TRUE | OK | 86.5 | 0.0101 | 0.782 | 0.945 | -0.066 | -0.033 | 99.6 | 69.9 | 111.8 | 77.4 | 66.6 | 93.8 |
E016 | chr8 | 102838743 | 102838901 | TRUE | OK | 2343.9 | 0.00746 | 0.2065 | 0.7602 | 0.166 | 0.083 | 2662.2 | 1825.8 | 2624.8 | 2444.2 | 2185.8 | 2320.4 |
E017 | chr8 | 102838901 | 102838916 | TRUE | OK | 1356.5 | 0.00941 | 0.2699 | 0.7823 | 0.158 | 0.079 | 1562.8 | 1009.4 | 1542.1 | 1420.7 | 1261.3 | 1342.9 |
E018 | chr8 | 102839649 | 102839823 | TRUE | OK | 2301.3 | 0.00968 | 0.382 | 0.8177 | 0.122 | 0.061 | 2676.0 | 1761.2 | 2638.9 | 2372.8 | 2184.8 | 2174.4 |
E019 | chr8 | 102843550 | 102843553 | TRUE | OK | 1281.8 | 0.00879 | 0.3762 | 0.8155 | 0.119 | 0.060 | 1497.7 | 978.1 | 1458.5 | 1339.3 | 1218.2 | 1198.9 |
E020 | chr8 | 102843553 | 102843707 | TRUE | OK | 2001.4 | 0.00765 | 0.4711 | 0.8465 | 0.088 | 0.044 | 2351.6 | 1589.1 | 2271.3 | 2043.2 | 1886.1 | 1867.0 |
E021 | chr8 | 102843707 | 102843747 | TRUE | OK | 1212.2 | 0.00622 | 0.4022 | 0.8247 | 0.097 | 0.049 | 1411.0 | 974.9 | 1359.8 | 1226.1 | 1170.2 | 1131.2 |
E022 | chr8 | 102849998 | 102850144 | TRUE | OK | 488.2 | 0.00859 | 0.2091 | 0.761 | 0.182 | 0.091 | 568.9 | 356.6 | 538.9 | 507.3 | 476.9 | 480.5 |
E023 | chr8 | 102850144 | 102850165 | TRUE | OK | 17.3 | 0.0626 | 0.5609 | 0.8751 | -0.312 | -0.156 | 18.7 | 11.5 | 30.2 | 10.9 | 22.5 | 9.7 |
E024 | chr8 | 102858012 | 102858044 | TRUE | OK | 1076.3 | 0.00431 | 0.751 | 0.9355 | 0.025 | 0.012 | 1252.2 | 919.7 | 1228.8 | 1052.4 | 1017.5 | 987.1 |
E025 | chr8 | 102858044 | 102858102 | TRUE | OK | 1150.0 | 0.00803 | 0.4141 | 0.8285 | 0.103 | 0.052 | 1349.8 | 888.4 | 1308.4 | 1156.6 | 1093.9 | 1103.2 |
E026 | chr8 | 102858102 | 102858150 | TRUE | OK | 1224.5 | 0.0105 | 0.1717 | 0.7448 | 0.210 | 0.105 | 1430.7 | 884.2 | 1335.6 | 1235.0 | 1204.5 | 1256.9 |
E027 | chr8 | 102859069 | 102859188 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0465 | 0.3145 | NA | NA | NA | 3.0 | 3.1 | 1.0 | 5.0 | 2.9 | 2.9 |
E028 | chr8 | 102863806 | 102864035 | TRUE | OK | 1931.3 | 0.0085 | 0.0725 | 0.6665 | 0.259 | 0.129 | 2154.4 | 1442.1 | 2091.0 | 1956.8 | 1953.7 | 1989.7 |
E029 | chr8 | 102864035 | 102864128 | TRUE | OK | 1039.9 | 0.00852 | 0.03466 | 0.5726 | 0.314 | 0.157 | 1153.6 | 750.8 | 1087.8 | 1065.3 | 1035.1 | 1146.7 |
E030 | chr8 | 102864128 | 102864163 | TRUE | OK | 454.8 | 0.0102 | 0.07298 | 0.6674 | 0.295 | 0.147 | 504.8 | 315.9 | 491.5 | 459.7 | 448.5 | 508.6 |
E031 | chr8 | 102864163 | 102864193 | TRUE | OK | 12.7 | 0.0149 | 0.2922 | 0.7894 | 0.396 | 0.198 | 12.8 | 6.3 | 16.1 | 12.9 | 14.7 | 13.5 |
E032 | chr8 | 102872276 | 102872412 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.542 | 0.6832 | NA | NA | NA | 0.0 | 3.1 | 0.0 | 1.0 | 2.9 | 0.0 |
E033 | chr8 | 102886917 | 102887147 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.216 | 0.2164 | NA | NA | NA | 0.0 | 1.0 | 6.0 | 5.0 | 2.0 | 6.8 |
E034 | chr8 | 102893802 | 102893864 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.293 | 0.9443 | NA | NA | NA | 3.9 | 0.0 | 1.0 | 0.0 | 1.0 | 2.9 |
J035 | chr8 | 102828678 | 102829271 | TRUE | OK | 1134.9 | 0.00405 | 0.02713 | 0.5382 | -0.243 | -0.122 | 1455.3 | 1183.5 | 1240.9 | 1119.9 | 825.5 | 984.2 |
J036 | chr8 | 102829486 | 102829820 | TRUE | OK | 1289.7 | 0.00235 | 0.885 | 0.9723 | 0.009 | 0.004 | 1523.4 | 1179.3 | 1393.0 | 1253.9 | 1099.7 | 1288.8 |
J037 | chr8 | 102829936 | 102830125 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.6 | 0.0153 | 0.5807 | NA | NA | NA | 4.9 | 6.3 | 11.1 | 8.9 | 7.8 | 6.8 |
J038 | chr8 | 102829936 | 102833055 | TRUE | OK | 1232.8 | 0.00261 | 0.9021 | 0.9767 | -0.018 | -0.009 | 1493.8 | 1129.3 | 1323.5 | 1164.5 | 1074.3 | 1211.4 |
J039 | chr8 | 102833218 | 102834188 | TRUE | OK | 1273.2 | 0.00148 | 0.5632 | 0.876 | -0.044 | -0.022 | 1498.7 | 1203.3 | 1406.1 | 1236.0 | 1064.5 | 1230.8 |
J040 | chr8 | 102834263 | 102834665 | TRUE | OK | 1183.8 | 0.00217 | 0.9707 | 0.993 | 0.001 | 0.001 | 1395.2 | 1102.2 | 1270.1 | 1182.4 | 982.2 | 1170.8 |
J041 | chr8 | 102834747 | 102836255 | TRUE | OK | 1333.1 | 0.00351 | 0.804 | 0.951 | 0.023 | 0.012 | 1577.6 | 1192.9 | 1444.4 | 1377.0 | 1094.8 | 1312.0 |
J042 | chr8 | 102836390 | 102838743 | TRUE | OK | 1201.0 | 0.00499 | 0.0643 | 0.654 | 0.213 | 0.106 | 1365.6 | 941.6 | 1269.1 | 1268.8 | 1132.0 | 1228.8 |
J043 | chr8 | 102836541 | 102838743 | TRUE | OK | 52.0 | 0.0145 | 0.7501 | 0.9353 | 0.078 | 0.039 | 57.2 | 38.6 | 65.5 | 46.7 | 40.2 | 63.8 |
J044 | chr8 | 102838916 | 102839649 | TRUE | OK | 1250.5 | 0.00892 | 0.2444 | 0.7737 | 0.164 | 0.082 | 1435.6 | 932.2 | 1416.2 | 1306.5 | 1167.3 | 1245.3 |
J045 | chr8 | 102838916 | 102843550 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.815 | 0.9554 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 3.0 | 0.0 | 0.0 |
J046 | chr8 | 102839823 | 102843550 | TRUE | OK | 1244.8 | 0.00882 | 0.3455 | 0.8057 | 0.128 | 0.064 | 1450.4 | 943.7 | 1415.1 | 1302.5 | 1185.9 | 1170.8 |
J047 | chr8 | 102843747 | 102849998 | TRUE | OK | 310.3 | 0.0119 | 0.1619 | 0.7401 | 0.242 | 0.121 | 369.8 | 210.6 | 330.4 | 341.5 | 314.3 | 294.9 |
J048 | chr8 | 102843747 | 102858012 | TRUE | OK | 704.0 | 0.00333 | 0.7624 | 0.9391 | 0.023 | 0.011 | 799.7 | 608.9 | 816.9 | 688.0 | 664.9 | 645.8 |
J049 | chr8 | 102850144 | 102858012 | TRUE | OK | 225.0 | 0.00584 | 0.6349 | 0.8994 | 0.055 | 0.028 | 275.1 | 176.2 | 251.8 | 220.4 | 213.5 | 212.7 |
J050 | chr8 | 102850165 | 102858012 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.3 | 0.0142 | 0.784 | NA | NA | NA | 7.9 | 8.3 | 8.1 | 7.9 | 7.8 | 3.9 |
J051 | chr8 | 102858150 | 102859069 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0828 | 0.9255 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 3.0 | 1.0 | 0.0 |
J052 | chr8 | 102858150 | 102863806 | TRUE | OK | 1044.6 | 0.00931 | 0.1496 | 0.7345 | 0.213 | 0.106 | 1211.8 | 764.3 | 1133.1 | 1050.4 | 1030.2 | 1078.0 |
J053 | chr8 | 102858150 | 102872276 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J054 | chr8 | 102858150 | 102886917 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.173 | 0.641 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 1.0 |
J055 | chr8 | 102859188 | 102863806 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0979 | 0.02122 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 5.0 | 1.0 | 1.9 |
J056 | chr8 | 102887147 | 102893802 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N057 | chr8 | 102828582 | 102829423 | TRUE | OK | 15.8 | 0.00909 | 1.685e-07 | 0.0001891 | 1.883 | 0.942 | 10.8 | 7.3 | 4.0 | 20.8 | 25.5 | 26.1 |
N058 | chr8 | 102829933 | 102833055 | TRUE | OK | 63.1 | 0.0138 | 0.5577 | 0.874 | -0.143 | -0.072 | 63.1 | 59.4 | 87.6 | 56.6 | 42.1 | 69.6 |
N059 | chr8 | 102843729 | 102858012 | TRUE | OK | 13.4 | 0.0122 | 0.9486 | 0.988 | 0.025 | 0.013 | 17.7 | 11.5 | 13.1 | 14.9 | 6.9 | 16.4 |
N060 | chr8 | 102864623 | 102879894 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0105 | 0.2936 | NA | NA | NA | 7.9 | 7.3 | 10.1 | 10.9 | 8.8 | 10.6 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000155096.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |