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Raw Counts Table (ENSG00000154845.15)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Raw Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr18	9546790	9546909	TRUE	OK	150.5	0.0376	0.1113	0.7091	-0.608	-0.304	132.0	260.0	149.0	130.0	119.0	110.0
E002	chr18	9546909	9547712	TRUE	OK	2359.5	0.0198	0.2474	0.7748	-0.282	-0.141	2288.0	2988.0	2334.0	2298.0	2039.0	2230.0
E003	chr18	9547712	9547803	TRUE	OK	667.0	0.00181	0.1906	0.754	0.111	0.055	695.0	626.0	620.0	710.0	653.0	719.0
E004	chr18	9547803	9547952	TRUE	OK	927.6	0.00273	0.9631	0.9914	0.002	0.001	1031.0	892.0	874.0	945.0	885.0	966.0
E005	chr18	9549196	9549237	TRUE	OK	721.7	0.00403	0.9393	0.9856	-0.013	-0.007	841.0	676.0	671.0	721.0	675.0	769.0
E006	chr18	9549237	9549338	TRUE	OK	844.5	0.00329	0.7173	0.9252	-0.041	-0.020	957.0	832.0	791.0	857.0	797.0	856.0
E007	chr18	9549833	9550051	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.0668	0.1217	NA	NA	NA	6.0	0.0	3.0	9.0	4.0	6.0
E008	chr18	9550051	9550186	TRUE	OK	963.7	0.00299	0.2198	0.7648	-0.121	-0.061	1072.0	985.0	958.0	939.0	852.0	1000.0
E009	chr18	9550186	9550277	TRUE	OK	26.9	0.00629	0.802	0.9504	-0.069	-0.035	31.0	23.0	29.0	27.0	26.0	26.0
E010	chr18	9550277	9550300	TRUE	OK	538.6	0.00387	0.2893	0.7883	-0.121	-0.061	618.0	549.0	521.0	539.0	452.0	566.0
E011	chr18	9550300	9550315	TRUE	OK	505.8	0.00365	0.263	0.78	-0.124	-0.062	563.0	529.0	494.0	526.0	419.0	515.0
E012	chr18	9550315	9550368	TRUE	OK	598.4	0.00313	0.5559	0.8735	-0.060	-0.030	657.0	610.0	572.0	628.0	521.0	617.0
E013	chr18	9550368	9550398	TRUE	OK	476.3	0.00299	0.8666	0.9675	-0.018	-0.009	523.0	476.0	446.0	489.0	434.0	503.0
E014	chr18	9550398	9550482	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.035	0.2917	NA	NA	NA	5.0	2.0	3.0	4.0	7.0	5.0
E015	chr18	9550482	9551939	TRUE	OK	31.4	0.0104	0.2791	0.7847	0.279	0.139	37.0	17.0	32.0	36.0	36.0	32.0
E016	chr18	9553321	9553422	TRUE	OK	584.6	0.00125	0.9597	0.9906	-0.005	-0.002	627.0	561.0	578.0	607.0	553.0	598.0
E017	chr18	9556980	9557220	FALSE	LOW_COUNTS_INDEP_FILTER	5.5	0.0617	0.158	NA	NA	NA	5.0	4.0	13.0	3.0	3.0	5.0
E018	chr18	9557220	9557325	TRUE	OK	599.1	0.00244	0.9581	0.9903	-0.000	-0.000	671.0	497.0	642.0	628.0	549.0	628.0
E019	chr18	9557325	9557382	TRUE	OK	617.7	0.00187	0.424	0.8311	-0.072	-0.036	702.0	545.0	661.0	634.0	539.0	644.0
E020	chr18	9559418	9559541	TRUE	OK	859.3	0.00136	0.2767	0.7836	-0.082	-0.041	969.0	770.0	922.0	893.0	754.0	873.0
E021	chr18	9559541	9559576	TRUE	OK	662.4	0.00117	0.4419	0.8369	-0.059	-0.029	742.0	592.0	703.0	697.0	595.0	665.0
E022	chr18	9559576	9559604	TRUE	OK	676.3	0.0011	0.9884	0.9972	0.000	0.000	730.0	599.0	712.0	740.0	622.0	675.0
E023	chr18	9561979	9561982	TRUE	OK	632.7	0.00122	0.7864	0.9461	0.020	0.010	678.0	557.0	662.0	703.0	579.0	636.0
E024	chr18	9561982	9562072	TRUE	OK	897.2	0.00111	0.5903	0.8847	0.036	0.018	956.0	782.0	940.0	988.0	847.0	898.0
E025	chr18	9562072	9562075	TRUE	OK	571.8	0.00124	0.149	0.7343	0.110	0.055	590.0	480.0	595.0	633.0	549.0	603.0
E026	chr18	9562921	9562922	TRUE	OK	77.9	0.00336	0.003452	0.2496	0.482	0.241	70.0	59.0	68.0	87.0	91.0	96.0
E027	chr18	9562922	9563010	TRUE	OK	111.2	0.00236	0.009209	0.3813	0.360	0.180	102.0	91.0	102.0	129.0	116.0	132.0
E028	chr18	9563010	9563046	TRUE	OK	87.1	0.00394	0.4499	0.8396	0.124	0.062	85.0	74.0	93.0	90.0	78.0	106.0
E029	chr18	9563046	9563146	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0338	0.4941	NA	NA	NA	3.0	5.0	7.0	4.0	3.0	4.0
E030	chr18	9563377	9563550	TRUE	OK	1007.3	0.00184	0.1679	0.7432	0.108	0.054	1064.0	824.0	1053.0	1108.0	962.0	1068.0
E031	chr18	9563550	9563866	TRUE	OK	22.7	0.0113	0.5179	0.8617	0.194	0.097	24.0	14.0	26.0	31.0	23.0	19.0
E032	chr18	9570156	9570466	TRUE	OK	1482.6	0.00397	0.1709	0.7444	0.141	0.071	1626.0	1155.0	1517.0	1621.0	1450.0	1583.0
E033	chr18	9570466	9570683	TRUE	OK	1208.2	0.00627	0.3961	0.8225	0.107	0.053	1338.0	913.0	1286.0	1395.0	1142.0	1220.0
E034	chr18	9577063	9577191	TRUE	OK	866.7	0.00578	0.2083	0.7608	0.159	0.080	964.0	646.0	881.0	1020.0	824.0	899.0
E035	chr18	9583116	9583275	TRUE	OK	934.1	0.00619	0.3488	0.8071	0.115	0.057	1055.0	694.0	976.0	1046.0	899.0	971.0
E036	chr18	9584514	9584580	TRUE	OK	781.0	0.0093	0.8204	0.9553	0.020	0.010	915.0	568.0	866.0	851.0	698.0	818.0
E037	chr18	9584720	9584775	TRUE	OK	710.8	0.00884	0.9465	0.9873	-0.023	-0.012	831.0	533.0	802.0	794.0	607.0	723.0
E038	chr18	9584775	9584828	TRUE	OK	771.8	0.0117	0.9872	0.9969	-0.011	-0.005	932.0	563.0	849.0	860.0	637.0	819.0
E039	chr18	9588078	9588084	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.418	0.9838	NA	NA	NA	0.0	1.0	6.0	0.0	2.0	4.0
E040	chr18	9588084	9588088	TRUE	OK	10.6	0.0179	0.8266	0.9569	0.090	0.045	6.0	13.0	12.0	11.0	10.0	12.0
E041	chr18	9588088	9588090	TRUE	OK	639.6	0.0112	0.9631	0.9914	-0.020	-0.010	771.0	472.0	705.0	710.0	520.0	684.0
E042	chr18	9588090	9588108	TRUE	OK	672.9	0.0112	0.9377	0.9853	0.002	0.001	797.0	491.0	747.0	753.0	555.0	720.0
E043	chr18	9588108	9588113	TRUE	OK	611.3	0.0107	0.9016	0.9765	0.010	0.005	722.0	445.0	677.0	690.0	509.0	648.0
E044	chr18	9588113	9588137	TRUE	OK	698.3	0.0108	0.7794	0.9443	0.039	0.020	819.0	508.0	760.0	784.0	583.0	763.0
E045	chr18	9588137	9588151	TRUE	OK	668.5	0.00935	0.7446	0.9339	0.049	0.024	780.0	503.0	708.0	739.0	555.0	752.0
E046	chr18	9588151	9588171	TRUE	OK	769.3	0.00756	0.35	0.8075	0.130	0.065	882.0	568.0	782.0	846.0	697.0	873.0
E047	chr18	9588171	9588208	TRUE	OK	755.3	0.0107	0.3054	0.7932	0.166	0.083	881.0	527.0	759.0	843.0	683.0	872.0
E048	chr18	9588208	9588235	TRUE	OK	800.9	0.0106	0.3356	0.8027	0.154	0.077	920.0	558.0	829.0	910.0	717.0	906.0
E049	chr18	9588710	9588728	TRUE	OK	738.1	0.0101	0.1473	0.7335	0.236	0.118	822.0	500.0	746.0	868.0	681.0	845.0
E050	chr18	9588728	9588826	TRUE	OK	1057.9	0.00891	0.2374	0.7713	0.180	0.090	1191.0	756.0	1079.0	1223.0	958.0	1185.0
E051	chr18	9588826	9588853	TRUE	OK	969.0	0.00909	0.5232	0.8632	0.095	0.048	1114.0	712.0	1020.0	1113.0	842.0	1051.0
E052	chr18	9593767	9593874	TRUE	OK	1126.7	0.0101	0.3832	0.8181	0.134	0.067	1309.0	802.0	1161.0	1288.0	1017.0	1230.0
E053	chr18	9594178	9594234	TRUE	OK	52.8	0.0178	0.1528	0.7358	0.369	0.185	66.0	33.0	41.0	52.0	63.0	65.0
E054	chr18	9594702	9594824	TRUE	OK	26.1	0.00931	1.293e-05	0.006773	1.259	0.629	20.0	8.0	19.0	35.0	39.0	38.0
E055	chr18	9594824	9595017	TRUE	OK	34.4	0.0154	0.004995	0.2961	0.813	0.406	29.0	18.0	29.0	34.0	51.0	48.0
E056	chr18	9595017	9595061	TRUE	OK	753.4	0.0125	0.1796	0.7486	0.230	0.115	841.0	488.0	787.0	832.0	733.0	875.0
E057	chr18	9595061	9595102	TRUE	OK	517.2	0.0143	0.1579	0.738	0.257	0.128	586.0	322.0	529.0	550.0	554.0	588.0
E058	chr18	9595102	9595153	TRUE	OK	255.7	0.0195	0.2397	0.7721	0.256	0.128	289.0	154.0	266.0	241.0	284.0	314.0
E059	chr18	9599632	9599712	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.125	0.4528	NA	NA	NA	1.0	0.0	1.0	1.0	2.0	1.0
E060	chr18	9599712	9599741	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.251	0.6094	NA	NA	NA	1.0	0.0	1.0	0.0	0.0	1.0
E061	chr18	9612456	9612690	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.0458	0.2757	NA	NA	NA	6.0	2.0	6.0	1.0	3.0	4.0
E062	chr18	9613526	9613576	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.0416	0.8356	NA	NA	NA	4.0	1.0	6.0	5.0	3.0	4.0
E063	chr18	9613576	9613589	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.0583	0.6917	NA	NA	NA	3.0	1.0	4.0	6.0	2.0	2.0
E064	chr18	9613795	9614225	TRUE	OK	11.7	0.0392	0.2686	0.7819	0.539	0.269	10.0	5.0	14.0	17.0	7.0	18.0
E065	chr18	9614225	9614270	TRUE	OK	353.3	0.015	0.1396	0.7296	0.281	0.140	361.0	214.0	396.0	379.0	388.0	399.0
E066	chr18	9614270	9614274	TRUE	OK	11.5	0.0276	0.7782	0.9439	0.126	0.063	8.0	12.0	13.0	9.0	17.0	10.0
E067	chr18	9614274	9614287	FALSE	LOW_COUNTS_INDEP_FILTER	5.7	0.0436	0.5645	NA	NA	NA	4.0	9.0	6.0	4.0	3.0	8.0
E068	chr18	9614287	9614295	FALSE	LOW_COUNTS_INDEP_FILTER	5.0	0.0444	0.3495	NA	NA	NA	4.0	8.0	6.0	3.0	2.0	7.0
E069	chr18	9614477	9614505	TRUE	OK	256.5	0.0143	0.07507	0.6707	0.344	0.172	265.0	149.0	274.0	287.0	283.0	294.0
E070	chr18	9614505	9614513	TRUE	OK	177.8	0.0184	0.02398	0.5193	0.511	0.256	173.0	92.0	182.0	201.0	221.0	208.0
E071	chr18	9614513	9614515	TRUE	OK	165.4	0.0177	0.01776	0.4738	0.534	0.267	160.0	85.0	167.0	187.0	205.0	198.0
E072	chr18	9614515	9614533	TRUE	OK	163.3	0.0174	0.01545	0.4518	0.543	0.272	157.0	84.0	164.0	185.0	204.0	195.0
E073	chr18	9614533	9614558	TRUE	OK	132.4	0.0162	0.01805	0.4761	0.529	0.265	125.0	70.0	135.0	147.0	168.0	157.0
E074	chr18	9614558	9614559	TRUE	OK	67.6	0.0097	0.01722	0.4697	0.513	0.257	62.0	41.0	66.0	81.0	90.0	69.0
E075	chr18	9614559	9614569	TRUE	OK	66.4	0.00804	0.01234	0.4187	0.515	0.257	61.0	40.0	65.0	81.0	86.0	69.0
E076	chr18	9614795	9614895	TRUE	OK	34.9	0.102	0.3029	0.7923	-0.402	-0.201	51.0	29.0	40.0	54.0	27.0	9.0
E077	chr18	9615018	9615183	TRUE	OK	12.9	0.018	0.3716	0.814	-0.370	-0.185	17.0	8.0	19.0	9.0	11.0	14.0
E078	chr18	9615183	9615189	FALSE	LOW_COUNTS_INDEP_FILTER	5.7	0.0238	0.06586	NA	NA	NA	9.0	6.0	8.0	4.0	4.0	3.0
E079	chr18	9615189	9615240	FALSE	LOW_COUNTS_INDEP_FILTER	6.0	0.0397	0.5874	NA	NA	NA	9.0	5.0	6.0	4.0	9.0	3.0
J080	chr18	9547952	9549196	TRUE	OK	558.3	0.00507	0.8045	0.9511	-0.038	-0.019	668.0	533.0	505.0	557.0	511.0	593.0
J081	chr18	9549338	9550051	TRUE	OK	606.9	0.0034	0.4335	0.8339	-0.087	-0.043	671.0	622.0	588.0	577.0	566.0	633.0
J082	chr18	9550186	9550277	TRUE	OK	497.4	0.00383	0.3177	0.7967	-0.115	-0.057	571.0	506.0	479.0	493.0	418.0	530.0
J083	chr18	9550315	9553321	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.115	0.6879	NA	NA	NA	0.0	1.0	2.0	1.0	1.0	0.0
J084	chr18	9550398	9553321	TRUE	OK	389.5	0.00303	0.9135	0.9796	-0.013	-0.006	414.0	400.0	365.0	391.0	366.0	411.0
J085	chr18	9553422	9557220	TRUE	OK	351.7	0.000997	0.3094	0.7942	0.082	0.041	381.0	298.0	354.0	388.0	344.0	357.0
J086	chr18	9557382	9559418	TRUE	OK	513.7	0.00228	0.406	0.8256	-0.081	-0.041	595.0	455.0	542.0	520.0	438.0	548.0
J087	chr18	9559541	9561979	FALSE	LOW_COUNTS_INDEP_FILTER	3.2	0.0401	0.3008	NA	NA	NA	6.0	3.0	3.0	3.0	0.0	4.0
J088	chr18	9559604	9561979	TRUE	OK	621.9	0.000711	0.761	0.9387	0.019	0.010	663.0	551.0	651.0	687.0	575.0	623.0
J089	chr18	9562075	9562921	TRUE	OK	72.4	0.00245	0.0006303	0.1019	0.552	0.276	65.0	53.0	60.0	83.0	84.0	93.0
J090	chr18	9562075	9563377	TRUE	OK	486.6	0.000987	0.4295	0.8328	0.058	0.029	509.0	412.0	520.0	536.0	459.0	499.0
J091	chr18	9563010	9563377	FALSE	LOW_COUNTS_INDEP_FILTER	3.3	0.0308	0.09816	NA	NA	NA	2.0	1.0	3.0	7.0	3.0	4.0
J092	chr18	9563046	9563377	TRUE	OK	65.8	0.00826	0.2715	0.7827	0.236	0.118	65.0	51.0	67.0	68.0	56.0	91.0
J093	chr18	9563550	9570156	TRUE	OK	544.8	0.00117	0.1847	0.7506	0.100	0.050	595.0	455.0	542.0	598.0	512.0	586.0
J094	chr18	9570683	9577063	TRUE	OK	564.5	0.00578	0.1081	0.7055	0.213	0.107	608.0	408.0	574.0	689.0	533.0	598.0
J095	chr18	9577191	9583116	TRUE	OK	493.8	0.00302	0.1384	0.7288	0.152	0.076	541.0	378.0	500.0	567.0	476.0	520.0
J096	chr18	9577191	9584514	TRUE	OK	10.7	0.0443	0.3175	0.7966	0.496	0.248	14.0	6.0	7.0	7.0	14.0	17.0
J097	chr18	9583275	9584514	TRUE	OK	503.5	0.00731	0.566	0.8769	0.069	0.035	581.0	364.0	544.0	541.0	477.0	534.0
J098	chr18	9584580	9584720	TRUE	OK	627.5	0.00906	0.9846	0.9962	-0.010	-0.005	741.0	464.0	700.0	701.0	539.0	643.0
J099	chr18	9584828	9588088	TRUE	OK	617.4	0.0122	0.9866	0.9967	-0.014	-0.007	746.0	452.0	679.0	688.0	496.0	667.0
J100	chr18	9588235	9588710	TRUE	OK	641.0	0.01	0.1338	0.7256	0.244	0.122	705.0	429.0	655.0	748.0	596.0	742.0
J101	chr18	9588853	9593767	TRUE	OK	870.7	0.00849	0.5133	0.8603	0.097	0.049	999.0	648.0	907.0	1008.0	748.0	948.0
J102	chr18	9588853	9595017	TRUE	OK	10.1	0.0113	0.4098	0.8271	0.335	0.167	8.0	7.0	12.0	12.0	13.0	9.0
J103	chr18	9593874	9594178	TRUE	OK	11.5	0.025	0.1595	0.7387	0.590	0.295	16.0	4.0	8.0	14.0	13.0	15.0
J104	chr18	9593874	9595017	TRUE	OK	582.3	0.0137	0.2748	0.7831	0.194	0.097	672.0	376.0	606.0	656.0	539.0	672.0
J105	chr18	9594234	9595017	TRUE	OK	24.3	0.0595	0.08394	0.6819	0.727	0.363	33.0	8.0	15.0	25.0	31.0	36.0
J106	chr18	9595102	9599632	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J107	chr18	9595102	9612456	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J108	chr18	9595102	9613526	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.114	0.6843	NA	NA	NA	0.0	1.0	2.0	1.0	0.0	1.0
J109	chr18	9595102	9614225	TRUE	OK	154.2	0.0134	0.2263	0.7676	0.234	0.117	163.0	93.0	174.0	182.0	164.0	156.0
J110	chr18	9595153	9599632	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.7	0.3789	NA	NA	NA	0.0	0.0	0.0	0.0	2.0	0.0
J111	chr18	9595153	9613526	FALSE	LOW_COUNTS_INDEP_FILTER	1.1	0.079	0.7149	NA	NA	NA	2.0	0.0	1.0	1.0	2.0	1.0
J112	chr18	9595153	9614225	TRUE	OK	177.6	0.0173	0.1656	0.7422	0.304	0.152	185.0	107.0	191.0	171.0	194.0	227.0
J113	chr18	9612690	9614225	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.799	0.3328	NA	NA	NA	0.0	0.0	3.0	0.0	0.0	0.0
J114	chr18	9614270	9614477	TRUE	OK	247.5	0.0153	0.07108	0.6647	0.360	0.180	252.0	141.0	267.0	280.0	271.0	287.0
J115	chr18	9614270	9614795	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.5614	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J116	chr18	9614270	9615018	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0684	0.8542	NA	NA	NA	7.0	2.0	11.0	4.0	7.0	10.0
J117	chr18	9614270	9615183	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.539	0.5554	NA	NA	NA	0.0	1.0	0.0	0.0	0.0	0.0
N118	chr18	9547952	9550051	TRUE	OK	10.0	0.0118	0.1649	0.7418	-0.583	-0.291	13.0	8.0	15.0	11.0	6.0	7.0
N119	chr18	9593874	9594086	TRUE	OK	12.4	0.0264	0.7864	0.9461	0.119	0.059	17.0	8.0	11.0	12.0	8.0	19.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000154845.15
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE