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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr2 | 190408354 | 190408503 | TRUE | OK | 61.4 | 0.141 | 0.6508 | 0.9047 | -0.115 | -0.057 | 44.4 | 32.3 | 70.5 | 87.4 | 113.6 | 20.3 |
E002 | chr2 | 190415291 | 190415413 | TRUE | OK | 29.1 | 0.0505 | 0.6902 | 0.9168 | -0.109 | -0.055 | 24.7 | 17.7 | 27.2 | 30.8 | 54.8 | 19.3 |
E003 | chr2 | 190433326 | 190433392 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0434 | 0.221 | NA | NA | NA | 4.9 | 4.2 | 2.0 | 5.0 | 2.9 | 1.9 |
E004 | chr2 | 190435300 | 190435329 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.0393 | 0.7571 | NA | NA | NA | 2.0 | 3.1 | 4.0 | 6.0 | 2.9 | 3.9 |
E005 | chr2 | 190435894 | 190435976 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.026 | 0.4128 | NA | NA | NA | 4.9 | 6.3 | 6.0 | 6.0 | 9.8 | 4.8 |
E006 | chr2 | 190435976 | 190436156 | TRUE | OK | 134.2 | 0.0109 | 0.2938 | 0.7896 | 0.210 | 0.105 | 102.5 | 69.9 | 108.8 | 164.8 | 205.6 | 153.7 |
E007 | chr2 | 190436156 | 190436373 | TRUE | OK | 159.6 | 0.00409 | 0.3543 | 0.8088 | 0.132 | 0.066 | 137.1 | 93.8 | 114.8 | 196.6 | 185.1 | 230.1 |
E008 | chr2 | 190436373 | 190436498 | TRUE | OK | 132.8 | 0.00353 | 0.05137 | 0.6286 | 0.279 | 0.140 | 111.4 | 64.6 | 93.7 | 170.8 | 174.3 | 181.8 |
E009 | chr2 | 190436498 | 190437423 | TRUE | OK | 519.3 | 0.0155 | 0.3746 | 0.8148 | 0.155 | 0.077 | 456.5 | 249.2 | 422.0 | 624.5 | 657.1 | 706.8 |
E010 | chr2 | 190437423 | 190437561 | TRUE | OK | 179.2 | 0.00737 | 0.00763 | 0.3532 | 0.444 | 0.222 | 142.0 | 77.2 | 120.9 | 267.1 | 240.9 | 227.2 |
E011 | chr2 | 190442575 | 190443005 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.0 | 0.0229 | 0.08415 | NA | NA | NA | 8.9 | 8.3 | 5.0 | 6.0 | 4.9 | 8.7 |
E012 | chr2 | 190469492 | 190469649 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.0 | 0.0422 | 0.2014 | NA | NA | NA | 3.9 | 9.4 | 5.0 | 7.9 | 5.9 | 3.9 |
E013 | chr2 | 190469757 | 190469855 | TRUE | OK | 123.0 | 0.00597 | 0.001547 | 0.1675 | 0.548 | 0.274 | 89.7 | 55.3 | 76.5 | 200.5 | 154.7 | 161.5 |
E014 | chr2 | 190488656 | 190488818 | TRUE | OK | 161.4 | 0.0025 | 7.522e-05 | 0.02551 | 0.523 | 0.261 | 108.5 | 81.3 | 105.8 | 241.2 | 203.7 | 228.2 |
E015 | chr2 | 190489767 | 190489819 | TRUE | OK | 121.9 | 0.00312 | 0.004713 | 0.2878 | 0.419 | 0.209 | 92.7 | 65.7 | 74.5 | 178.7 | 147.9 | 172.1 |
E016 | chr2 | 190489819 | 190489866 | TRUE | OK | 119.1 | 0.00607 | 0.05942 | 0.6467 | 0.320 | 0.160 | 104.5 | 64.6 | 68.5 | 165.8 | 142.0 | 169.2 |
E017 | chr2 | 190497438 | 190497648 | TRUE | OK | 227.3 | 0.00303 | 0.0868 | 0.6855 | 0.210 | 0.105 | 195.2 | 138.7 | 144.0 | 310.7 | 280.1 | 294.9 |
E018 | chr2 | 190497648 | 190497699 | TRUE | OK | 140.2 | 0.00314 | 0.2295 | 0.7689 | 0.164 | 0.082 | 125.2 | 84.5 | 89.6 | 183.7 | 174.3 | 183.7 |
E019 | chr2 | 190497699 | 190497719 | TRUE | OK | 109.7 | 0.00322 | 0.8257 | 0.9566 | 0.027 | 0.013 | 102.5 | 64.6 | 80.6 | 139.0 | 127.3 | 144.1 |
E020 | chr2 | 190497719 | 190497995 | TRUE | OK | 24.4 | 0.00805 | 0.002496 | 0.2148 | -0.852 | -0.426 | 26.6 | 27.1 | 23.2 | 27.8 | 20.6 | 21.3 |
E021 | chr2 | 190499831 | 190499856 | TRUE | OK | 12.3 | 0.0642 | 0.2159 | 0.7635 | -0.664 | -0.332 | 11.8 | 6.3 | 18.1 | 20.8 | 7.8 | 8.7 |
E022 | chr2 | 190500014 | 190500276 | TRUE | OK | 191.7 | 0.00363 | 0.3087 | 0.7939 | 0.130 | 0.065 | 164.7 | 102.2 | 149.1 | 250.2 | 224.3 | 260.1 |
E023 | chr2 | 190500276 | 190502113 | TRUE | OK | 866.4 | 0.0107 | 0.8432 | 0.9614 | 0.053 | 0.027 | 654.7 | 669.4 | 630.5 | 1114.9 | 1038.0 | 1090.6 |
E024 | chr2 | 190502113 | 190502314 | TRUE | OK | 54.8 | 0.0134 | 0.01311 | 0.4278 | -0.612 | -0.306 | 60.1 | 53.2 | 45.3 | 54.6 | 43.1 | 72.5 |
E025 | chr2 | 190502314 | 190502315 | TRUE | OK | 19.2 | 0.00918 | 0.0387 | 0.5887 | -0.650 | -0.325 | 19.7 | 15.6 | 21.2 | 21.8 | 14.7 | 22.2 |
E026 | chr2 | 190504995 | 190505121 | TRUE | OK | 24.9 | 0.0163 | 0.08318 | 0.6811 | -0.576 | -0.288 | 31.6 | 12.5 | 27.2 | 31.8 | 20.6 | 26.1 |
E027 | chr2 | 190509162 | 190509205 | TRUE | OK | 162.4 | 0.00918 | 2e-06 | 0.001475 | -0.882 | -0.441 | 199.2 | 152.2 | 155.1 | 146.9 | 130.2 | 190.5 |
J028 | chr2 | 190408503 | 190415291 | TRUE | OK | 15.3 | 0.109 | 0.3309 | 0.8012 | -0.493 | -0.246 | 11.8 | 11.5 | 19.1 | 16.9 | 27.4 | 4.8 |
J029 | chr2 | 190408503 | 190435976 | TRUE | OK | 30.5 | 0.152 | 0.6783 | 0.9131 | 0.399 | 0.200 | 15.8 | 10.4 | 32.2 | 41.7 | 69.5 | 13.5 |
J030 | chr2 | 190415413 | 190433326 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.371 | 0.5626 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 3.0 | 0.0 | 0.0 |
J031 | chr2 | 190415413 | 190435976 | TRUE | OK | 17.5 | 0.0488 | 0.7495 | 0.9351 | 0.160 | 0.080 | 15.8 | 6.3 | 15.1 | 17.9 | 34.3 | 15.5 |
J032 | chr2 | 190433392 | 190435976 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.175 | 0.09609 | NA | NA | NA | 3.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J033 | chr2 | 190435329 | 190435976 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.565 | 0.8289 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J034 | chr2 | 190437561 | 190469757 | TRUE | OK | 79.8 | 0.0043 | 0.0001061 | 0.03244 | 0.700 | 0.350 | 59.2 | 31.3 | 42.3 | 128.1 | 111.6 | 106.4 |
J035 | chr2 | 190443005 | 190469757 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.3779 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J036 | chr2 | 190469649 | 190469757 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.265 | 0.7176 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J037 | chr2 | 190469855 | 190488656 | TRUE | OK | 75.4 | 0.0031 | 0.00047 | 0.08532 | 0.611 | 0.306 | 48.3 | 33.4 | 49.4 | 116.2 | 92.1 | 113.1 |
J038 | chr2 | 190488818 | 190489767 | TRUE | OK | 91.1 | 0.0027 | 0.001453 | 0.1622 | 0.510 | 0.255 | 63.1 | 51.1 | 52.4 | 138.0 | 109.7 | 132.5 |
J039 | chr2 | 190489866 | 190497438 | TRUE | OK | 105.7 | 0.00538 | 0.07467 | 0.6696 | 0.302 | 0.151 | 91.7 | 54.2 | 66.5 | 144.9 | 121.4 | 155.7 |
J040 | chr2 | 190497719 | 190499831 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J041 | chr2 | 190497719 | 190500014 | TRUE | OK | 78.4 | 0.00458 | 0.212 | 0.7622 | 0.219 | 0.110 | 71.0 | 42.8 | 49.4 | 101.3 | 91.1 | 115.1 |
J042 | chr2 | 190499856 | 190500014 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J043 | chr2 | 190500276 | 190504995 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J044 | chr2 | 190505121 | 190509162 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N045 | chr2 | 190455571 | 190510360 | TRUE | OK | 169.0 | 0.0106 | 7.599e-07 | 0.0006579 | -0.958 | -0.479 | 180.4 | 184.6 | 174.2 | 135.0 | 182.1 | 157.6 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000151690.15 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |