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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr11 | 134253494 | 134253547 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.0293 | 0.04688 | NA | NA | NA | 9.9 | 7.3 | 6.0 | 3.0 | 2.0 | 4.8 |
E002 | chr11 | 134253547 | 134253557 | TRUE | OK | 17.4 | 0.0112 | 0.8255 | 0.9566 | -0.068 | -0.034 | 17.7 | 14.6 | 22.2 | 13.9 | 15.7 | 20.3 |
E003 | chr11 | 134253557 | 134253558 | TRUE | OK | 18.0 | 0.0111 | 0.9167 | 0.9805 | 0.041 | 0.021 | 17.7 | 14.6 | 22.2 | 13.9 | 17.6 | 22.2 |
E004 | chr11 | 134253558 | 134253560 | TRUE | OK | 18.9 | 0.0106 | 0.6206 | 0.8947 | 0.168 | 0.084 | 17.7 | 14.6 | 22.2 | 13.9 | 22.5 | 22.2 |
E005 | chr11 | 134253560 | 134253563 | TRUE | OK | 21.2 | 0.0167 | 0.8463 | 0.9622 | 0.061 | 0.031 | 19.7 | 14.6 | 29.2 | 18.9 | 22.5 | 22.2 |
E006 | chr11 | 134253563 | 134253567 | TRUE | OK | 29.7 | 0.0127 | 0.8108 | 0.9528 | -0.068 | -0.034 | 24.7 | 27.1 | 41.3 | 21.8 | 33.3 | 30.0 |
E007 | chr11 | 134253567 | 134253568 | TRUE | OK | 30.5 | 0.01 | 0.7564 | 0.9373 | -0.081 | -0.041 | 26.6 | 28.2 | 41.3 | 22.8 | 34.3 | 30.0 |
E008 | chr11 | 134253568 | 134253576 | TRUE | OK | 46.5 | 0.0147 | 0.8969 | 0.9754 | -0.049 | -0.024 | 37.5 | 42.8 | 64.5 | 43.7 | 48.0 | 42.5 |
E009 | chr11 | 134253576 | 134253616 | TRUE | OK | 114.0 | 0.00257 | 0.8993 | 0.9759 | -0.017 | -0.008 | 108.5 | 119.9 | 122.9 | 103.3 | 115.6 | 114.1 |
E010 | chr11 | 134253616 | 134253709 | TRUE | OK | 176.0 | 0.00614 | 0.9333 | 0.9843 | -0.010 | -0.005 | 187.3 | 167.9 | 185.3 | 160.8 | 192.9 | 161.5 |
E011 | chr11 | 134256547 | 134256582 | TRUE | OK | 193.3 | 0.00487 | 0.7438 | 0.9337 | 0.049 | 0.025 | 198.2 | 180.4 | 204.5 | 181.7 | 202.7 | 192.4 |
E012 | chr11 | 134256582 | 134256609 | TRUE | OK | 187.8 | 0.00712 | 0.9622 | 0.9912 | 0.008 | 0.004 | 191.3 | 168.9 | 213.5 | 168.8 | 195.9 | 188.5 |
E013 | chr11 | 134256609 | 134256648 | TRUE | OK | 176.5 | 0.00655 | 0.6576 | 0.9068 | 0.073 | 0.036 | 183.4 | 157.5 | 187.3 | 166.8 | 181.2 | 182.7 |
E014 | chr11 | 134256648 | 134256910 | TRUE | OK | 14.4 | 0.0126 | 0.02986 | 0.5518 | 0.802 | 0.401 | 11.8 | 9.4 | 11.1 | 18.9 | 14.7 | 20.3 |
E015 | chr11 | 134257087 | 134257257 | TRUE | OK | 297.0 | 0.00888 | 0.2025 | 0.7588 | 0.220 | 0.110 | 296.8 | 256.5 | 298.1 | 303.8 | 326.1 | 300.7 |
E016 | chr11 | 134257746 | 134258514 | TRUE | OK | 28.8 | 0.00681 | 0.2307 | 0.7694 | 0.318 | 0.159 | 23.7 | 25.0 | 30.2 | 24.8 | 32.3 | 36.7 |
E017 | chr11 | 134258514 | 134258624 | TRUE | OK | 264.8 | 0.00596 | 0.1763 | 0.747 | 0.204 | 0.102 | 262.3 | 238.8 | 260.9 | 265.1 | 294.8 | 266.8 |
E018 | chr11 | 134258891 | 134259007 | TRUE | OK | 13.6 | 0.0657 | 0.2718 | 0.7829 | -0.487 | -0.244 | 18.7 | 16.7 | 13.1 | 3.0 | 19.6 | 10.6 |
E019 | chr11 | 134259007 | 134259084 | TRUE | OK | 216.2 | 0.00789 | 0.6706 | 0.9106 | 0.071 | 0.036 | 239.6 | 215.8 | 192.4 | 206.5 | 236.0 | 206.9 |
E020 | chr11 | 134259084 | 134259237 | TRUE | OK | 13.3 | 0.0248 | 0.2424 | 0.773 | -0.496 | -0.248 | 21.7 | 12.5 | 13.1 | 11.9 | 11.8 | 8.7 |
E021 | chr11 | 134259237 | 134259607 | TRUE | OK | 20.8 | 0.0803 | 0.3363 | 0.8029 | -0.428 | -0.214 | 20.7 | 24.0 | 28.2 | 30.8 | 12.7 | 8.7 |
E022 | chr11 | 134259607 | 134259745 | TRUE | OK | 280.4 | 0.0082 | 0.9087 | 0.9784 | 0.014 | 0.007 | 288.9 | 307.6 | 258.9 | 289.9 | 280.1 | 257.2 |
E023 | chr11 | 134259745 | 134259845 | TRUE | OK | 52.8 | 0.00441 | 3.856e-05 | 0.01547 | 0.830 | 0.415 | 43.4 | 40.7 | 34.2 | 56.6 | 71.5 | 70.6 |
E024 | chr11 | 134259845 | 134259925 | TRUE | OK | 44.8 | 0.00595 | 2.352e-05 | 0.01076 | 0.955 | 0.478 | 31.6 | 29.2 | 34.2 | 42.7 | 65.6 | 65.7 |
E025 | chr11 | 134259925 | 134260028 | TRUE | OK | 46.2 | 0.00937 | 0.01179 | 0.4134 | 0.612 | 0.306 | 35.5 | 32.3 | 45.3 | 43.7 | 52.9 | 67.7 |
E026 | chr11 | 134260028 | 134260140 | TRUE | OK | 55.1 | 0.0192 | 0.4392 | 0.836 | 0.238 | 0.119 | 51.3 | 40.7 | 63.5 | 38.7 | 71.5 | 64.8 |
E027 | chr11 | 134260140 | 134260282 | TRUE | OK | 67.9 | 0.0367 | 0.1681 | 0.7433 | 0.514 | 0.257 | 65.1 | 38.6 | 69.5 | 47.7 | 94.0 | 92.8 |
E028 | chr11 | 134260282 | 134260552 | TRUE | OK | 83.8 | 0.0211 | 0.01055 | 0.3995 | 0.749 | 0.375 | 58.2 | 58.4 | 78.6 | 63.5 | 131.2 | 113.1 |
E029 | chr11 | 134260552 | 134260614 | TRUE | OK | 40.5 | 0.0107 | 0.05442 | 0.6358 | 0.510 | 0.255 | 34.5 | 39.6 | 29.2 | 29.8 | 58.8 | 51.2 |
E030 | chr11 | 134260614 | 134261043 | TRUE | OK | 119.2 | 0.00922 | 0.2635 | 0.7802 | 0.243 | 0.122 | 109.4 | 111.6 | 115.8 | 85.4 | 148.9 | 144.1 |
E031 | chr11 | 134261043 | 134261179 | TRUE | OK | 350.2 | 0.0018 | 0.39 | 0.8204 | -0.087 | -0.043 | 335.2 | 405.6 | 358.6 | 314.7 | 355.5 | 331.6 |
E032 | chr11 | 134261274 | 134261372 | TRUE | OK | 308.0 | 0.00238 | 0.2462 | 0.7744 | -0.131 | -0.065 | 282.0 | 380.6 | 317.3 | 263.1 | 299.7 | 305.5 |
E033 | chr11 | 134261606 | 134261737 | TRUE | OK | 11.2 | 0.0128 | 0.08081 | 0.6781 | 0.710 | 0.355 | 8.9 | 9.4 | 8.1 | 10.9 | 14.7 | 15.5 |
E034 | chr11 | 134261737 | 134261885 | TRUE | OK | 312.4 | 0.00207 | 0.03656 | 0.5814 | -0.220 | -0.110 | 294.8 | 381.6 | 341.4 | 248.2 | 294.8 | 313.3 |
E035 | chr11 | 134261885 | 134261890 | TRUE | OK | 166.3 | 0.00256 | 0.2659 | 0.7811 | -0.140 | -0.070 | 159.7 | 204.4 | 168.2 | 132.0 | 158.6 | 175.0 |
E036 | chr11 | 134262131 | 134262184 | TRUE | OK | 41.3 | 0.00586 | 0.003761 | 0.2591 | 0.661 | 0.330 | 33.5 | 28.2 | 37.3 | 43.7 | 49.0 | 56.1 |
E037 | chr11 | 134262184 | 134262276 | TRUE | OK | 43.4 | 0.012 | 0.01349 | 0.4322 | 0.641 | 0.320 | 34.5 | 26.1 | 44.3 | 44.7 | 50.9 | 59.9 |
E038 | chr11 | 134262276 | 134262519 | TRUE | OK | 41.8 | 0.00606 | 0.2402 | 0.7723 | 0.271 | 0.135 | 34.5 | 46.9 | 35.3 | 32.8 | 47.0 | 54.1 |
E039 | chr11 | 134262519 | 134262527 | TRUE | OK | 167.4 | 0.00307 | 0.0653 | 0.6552 | -0.240 | -0.120 | 166.6 | 211.7 | 173.2 | 118.1 | 165.5 | 169.2 |
E040 | chr11 | 134262527 | 134262612 | TRUE | OK | 249.3 | 0.00246 | 0.1055 | 0.7031 | -0.183 | -0.092 | 245.5 | 306.6 | 253.8 | 191.6 | 238.9 | 259.1 |
E041 | chr11 | 134262612 | 134262622 | TRUE | OK | 193.5 | 0.00274 | 0.142 | 0.7311 | -0.184 | -0.092 | 183.4 | 243.0 | 200.4 | 155.9 | 178.2 | 200.1 |
E042 | chr11 | 134262622 | 134262769 | TRUE | OK | 41.8 | 0.0088 | 0.7827 | 0.9452 | 0.083 | 0.041 | 37.5 | 46.9 | 40.3 | 25.8 | 48.0 | 52.2 |
E043 | chr11 | 134262769 | 134262958 | TRUE | OK | 69.6 | 0.00914 | 0.9838 | 0.996 | 0.015 | 0.007 | 74.9 | 66.7 | 70.5 | 59.6 | 59.7 | 86.0 |
E044 | chr11 | 134262958 | 134263555 | TRUE | OK | 103.4 | 0.00634 | 0.4189 | 0.8299 | 0.151 | 0.075 | 93.7 | 92.8 | 114.8 | 87.4 | 106.7 | 124.7 |
E045 | chr11 | 134263555 | 134264061 | TRUE | OK | 37.9 | 0.00976 | 0.6511 | 0.9048 | 0.129 | 0.065 | 35.5 | 36.5 | 39.3 | 28.8 | 35.3 | 52.2 |
E046 | chr11 | 134264907 | 134265850 | TRUE | OK | 676.6 | 0.00933 | 0.03031 | 0.5529 | -0.388 | -0.194 | 650.8 | 925.9 | 679.9 | 554.0 | 603.2 | 645.8 |
E047 | chr11 | 134265850 | 134265855 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.039 | 0.7462 | NA | NA | NA | 5.9 | 17.7 | 7.1 | 6.0 | 8.8 | 10.6 |
J048 | chr11 | 134253709 | 134256547 | TRUE | OK | 159.2 | 0.00656 | 0.9835 | 0.996 | 0.004 | 0.002 | 174.5 | 150.2 | 162.2 | 152.9 | 166.5 | 148.9 |
J049 | chr11 | 134253709 | 134257087 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.12 | 0.9876 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 2.0 | 0.0 | 1.0 |
J050 | chr11 | 134253709 | 134258514 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.5632 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J051 | chr11 | 134253709 | 134259007 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0827 | 0.1269 | NA | NA | NA | 4.9 | 7.3 | 1.0 | 1.0 | 2.9 | 1.0 |
J052 | chr11 | 134256648 | 134257087 | TRUE | OK | 124.4 | 0.00315 | 0.3297 | 0.8009 | 0.142 | 0.071 | 123.3 | 111.6 | 128.9 | 119.1 | 132.2 | 131.5 |
J053 | chr11 | 134256648 | 134258514 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.4 | 0.0131 | 0.1308 | NA | NA | NA | 8.9 | 13.6 | 9.1 | 7.9 | 4.9 | 5.8 |
J054 | chr11 | 134257257 | 134258514 | TRUE | OK | 169.3 | 0.00452 | 0.1753 | 0.7465 | 0.201 | 0.100 | 162.7 | 151.2 | 172.2 | 166.8 | 194.9 | 168.2 |
J055 | chr11 | 134257257 | 134259007 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.19 | 0.3583 | NA | NA | NA | 4.9 | 1.0 | 1.0 | 2.0 | 0.0 | 1.0 |
J056 | chr11 | 134258624 | 134259007 | TRUE | OK | 142.5 | 0.0114 | 0.2531 | 0.7765 | 0.231 | 0.115 | 155.8 | 117.8 | 130.9 | 148.9 | 156.7 | 145.0 |
J057 | chr11 | 134259084 | 134259607 | TRUE | OK | 140.1 | 0.00505 | 0.7671 | 0.9404 | 0.049 | 0.024 | 152.8 | 138.7 | 130.9 | 131.0 | 155.7 | 131.5 |
J058 | chr11 | 134259745 | 134260028 | TRUE | OK | 10.6 | 0.0255 | 0.5297 | 0.8653 | -0.257 | -0.129 | 13.8 | 10.4 | 11.1 | 6.0 | 15.7 | 6.8 |
J059 | chr11 | 134259745 | 134261043 | TRUE | OK | 146.4 | 0.0105 | 0.6947 | 0.9183 | -0.093 | -0.046 | 141.0 | 189.8 | 130.9 | 150.9 | 132.2 | 133.4 |
J060 | chr11 | 134261179 | 134261274 | TRUE | OK | 214.3 | 0.00149 | 0.1662 | 0.7425 | -0.148 | -0.074 | 196.2 | 259.6 | 230.7 | 179.7 | 215.4 | 204.0 |
J061 | chr11 | 134261372 | 134261606 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.0535 | 0.6465 | NA | NA | NA | 3.9 | 2.1 | 3.0 | 1.0 | 1.0 | 4.8 |
J062 | chr11 | 134261372 | 134261737 | TRUE | OK | 193.8 | 0.00184 | 0.2038 | 0.7592 | -0.145 | -0.072 | 173.5 | 232.5 | 214.5 | 155.9 | 189.0 | 197.2 |
J063 | chr11 | 134261890 | 134262131 | TRUE | OK | 20.3 | 0.00866 | 0.0003147 | 0.06661 | 1.131 | 0.565 | 8.9 | 16.7 | 14.1 | 25.8 | 22.5 | 33.8 |
J064 | chr11 | 134261890 | 134262519 | TRUE | OK | 125.5 | 0.00193 | 0.003847 | 0.2622 | -0.379 | -0.190 | 131.1 | 166.8 | 133.0 | 95.3 | 108.7 | 118.0 |
J065 | chr11 | 134262276 | 134262519 | TRUE | OK | 12.8 | 0.0419 | 0.2278 | 0.7682 | 0.619 | 0.310 | 11.8 | 6.3 | 13.1 | 6.9 | 20.6 | 18.4 |
J066 | chr11 | 134262622 | 134262769 | TRUE | OK | 17.2 | 0.0326 | 0.6404 | 0.9012 | 0.238 | 0.119 | 16.8 | 14.6 | 17.1 | 13.9 | 11.8 | 29.0 |
J067 | chr11 | 134262622 | 134264907 | TRUE | OK | 136.4 | 0.00225 | 0.1888 | 0.7531 | -0.175 | -0.087 | 128.2 | 176.2 | 137.0 | 118.1 | 129.3 | 129.6 |
J068 | chr11 | 134263555 | 134264907 | TRUE | OK | 11.2 | 0.0116 | 0.04921 | 0.6236 | 0.801 | 0.400 | 7.9 | 7.3 | 10.1 | 7.9 | 17.6 | 16.4 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000151498.11 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |