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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chrX | 9786428 | 9786710 | TRUE | OK | 17.6 | 0.247 | 0.5995 | 0.8878 | -0.060 | -0.030 | 17.7 | 13.6 | 18.1 | 28.8 | 26.4 | 1.0 |
E002 | chrX | 9873651 | 9873803 | TRUE | OK | 26.6 | 0.0257 | 0.399 | 0.8237 | 0.290 | 0.145 | 20.7 | 12.5 | 32.2 | 40.7 | 34.3 | 19.3 |
E003 | chrX | 9890976 | 9891108 | TRUE | OK | 22.1 | 0.0382 | 0.5997 | 0.8879 | 0.158 | 0.079 | 22.7 | 6.3 | 28.2 | 31.8 | 17.6 | 26.1 |
E004 | chrX | 9894357 | 9896698 | TRUE | OK | 127.8 | 0.0178 | 0.0001017 | 0.03146 | 0.936 | 0.468 | 89.7 | 45.9 | 116.8 | 176.7 | 148.9 | 188.5 |
E005 | chrX | 9898144 | 9898189 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E006 | chrX | 9898189 | 9898290 | TRUE | OK | 20.6 | 0.00983 | 0.01463 | 0.4447 | 0.770 | 0.385 | 13.8 | 7.3 | 20.1 | 33.8 | 23.5 | 25.1 |
E007 | chrX | 9912433 | 9912587 | TRUE | OK | 15.2 | 0.0163 | 0.1501 | 0.7348 | -0.548 | -0.274 | 18.7 | 9.4 | 22.2 | 16.9 | 7.8 | 16.4 |
E008 | chrX | 9912682 | 9913227 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.3 | 0.109 | 0.186 | NA | NA | NA | 5.9 | 1.0 | 6.0 | 1.0 | 1.0 | 4.8 |
E009 | chrX | 9932174 | 9932870 | TRUE | OK | 115.3 | 0.00355 | 0.3667 | 0.8125 | 0.142 | 0.071 | 102.5 | 79.2 | 120.9 | 153.9 | 113.6 | 121.8 |
E010 | chrX | 9937133 | 9937146 | TRUE | OK | 20.2 | 0.00885 | 0.8912 | 0.9739 | -0.051 | -0.025 | 15.8 | 14.6 | 26.2 | 22.8 | 19.6 | 22.2 |
E011 | chrX | 9937146 | 9937685 | TRUE | OK | 101.0 | 0.00585 | 0.4192 | 0.8299 | 0.127 | 0.063 | 88.7 | 60.5 | 116.8 | 108.2 | 117.5 | 114.1 |
E012 | chrX | 9939194 | 9939366 | TRUE | OK | 60.7 | 0.0222 | 0.1393 | 0.7293 | 0.417 | 0.209 | 44.4 | 31.3 | 67.5 | 62.5 | 64.6 | 93.8 |
E013 | chrX | 9944640 | 9944643 | TRUE | OK | 20.6 | 0.0293 | 0.2314 | 0.7698 | 0.506 | 0.253 | 15.8 | 14.6 | 16.1 | 25.8 | 15.7 | 35.8 |
E014 | chrX | 9944643 | 9944913 | TRUE | OK | 71.5 | 0.00907 | 0.4413 | 0.8367 | -0.167 | -0.084 | 76.9 | 51.1 | 79.6 | 78.4 | 56.8 | 86.0 |
E015 | chrX | 9946670 | 9946708 | TRUE | OK | 42.7 | 0.00828 | 0.01286 | 0.4241 | -0.612 | -0.306 | 55.2 | 30.2 | 57.4 | 36.7 | 32.3 | 44.5 |
E016 | chrX | 9946708 | 9949441 | TRUE | OK | 374.6 | 0.00838 | 3.206e-05 | 0.01338 | -0.704 | -0.351 | 392.4 | 343.1 | 430.1 | 389.2 | 361.4 | 331.6 |
E017 | chrX | 9949441 | 9949443 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.389 | 0.8743 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J018 | chrX | 9786710 | 9873651 | TRUE | OK | 10.8 | 0.194 | 0.9343 | 0.9845 | 0.217 | 0.108 | 8.9 | 7.3 | 11.1 | 17.9 | 18.6 | 1.0 |
J019 | chrX | 9873803 | 9890976 | TRUE | OK | 16.0 | 0.0232 | 0.3978 | 0.8232 | 0.294 | 0.147 | 11.8 | 5.2 | 22.2 | 23.8 | 14.7 | 18.4 |
J020 | chrX | 9891108 | 9894357 | TRUE | OK | 11.9 | 0.1 | 0.8479 | 0.9626 | 0.044 | 0.022 | 13.8 | 2.1 | 16.1 | 16.9 | 5.9 | 16.4 |
J021 | chrX | 9896698 | 9898189 | TRUE | OK | 11.7 | 0.0105 | 0.1248 | 0.7199 | 0.602 | 0.301 | 5.9 | 7.3 | 12.1 | 15.9 | 11.8 | 17.4 |
J022 | chrX | 9898290 | 9932174 | TRUE | OK | 16.2 | 0.0101 | 0.009251 | 0.3818 | 0.913 | 0.457 | 7.9 | 6.3 | 16.1 | 28.8 | 17.6 | 20.3 |
J023 | chrX | 9912587 | 9932174 | TRUE | OK | 14.4 | 0.00998 | 0.1419 | 0.731 | -0.528 | -0.264 | 17.7 | 9.4 | 20.1 | 16.9 | 7.8 | 14.5 |
J024 | chrX | 9913227 | 9932174 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.367 | 0.772 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.9 |
J025 | chrX | 9932870 | 9937133 | TRUE | OK | 19.2 | 0.00685 | 0.9182 | 0.9808 | -0.038 | -0.019 | 13.8 | 14.6 | 25.2 | 21.8 | 18.6 | 21.3 |
J026 | chrX | 9937685 | 9939194 | TRUE | OK | 37.3 | 0.0348 | 0.234 | 0.7706 | 0.382 | 0.191 | 25.6 | 15.6 | 47.3 | 34.7 | 45.0 | 55.1 |
J027 | chrX | 9939366 | 9944640 | TRUE | OK | 19.6 | 0.0298 | 0.2015 | 0.7585 | 0.547 | 0.273 | 13.8 | 14.6 | 15.1 | 23.8 | 15.7 | 34.8 |
J028 | chrX | 9939366 | 9944643 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.1 | 0.154 | 0.6715 | NA | NA | NA | 0.0 | 1.0 | 7.1 | 4.0 | 2.9 | 3.9 |
J029 | chrX | 9944913 | 9946670 | TRUE | OK | 35.1 | 0.00568 | 0.02845 | 0.5452 | -0.528 | -0.264 | 45.4 | 27.1 | 42.3 | 34.7 | 24.5 | 36.7 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000146950.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |