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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr6 | 78867550 | 78867606 | TRUE | OK | 41.1 | 0.00517 | 0.2471 | 0.7746 | -0.261 | -0.130 | 50.3 | 36.5 | 35.3 | 43.7 | 38.2 | 42.5 |
E002 | chr6 | 78867606 | 78867891 | TRUE | OK | 137.3 | 0.00319 | 0.07719 | 0.674 | -0.253 | -0.126 | 160.7 | 123.0 | 120.9 | 140.0 | 126.3 | 152.8 |
E003 | chr6 | 78871290 | 78872135 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.0323 | 0.328 | NA | NA | NA | 2.0 | 5.2 | 4.0 | 6.0 | 4.9 | 9.7 |
E004 | chr6 | 78885377 | 78885443 | TRUE | OK | 117.7 | 0.00821 | 0.3906 | 0.8206 | -0.165 | -0.083 | 140.0 | 91.8 | 105.8 | 113.2 | 105.8 | 149.9 |
E005 | chr6 | 78897828 | 78897959 | TRUE | OK | 120.6 | 0.00295 | 0.2523 | 0.776 | -0.167 | -0.083 | 128.2 | 97.0 | 120.9 | 116.2 | 121.4 | 140.2 |
E006 | chr6 | 78898063 | 78898191 | TRUE | OK | 102.6 | 0.00447 | 0.6364 | 0.8999 | -0.077 | -0.039 | 97.6 | 80.3 | 107.8 | 105.2 | 98.9 | 125.7 |
E007 | chr6 | 78898191 | 78898298 | TRUE | OK | 73.8 | 0.00352 | 0.06048 | 0.6489 | -0.321 | -0.160 | 74.9 | 73.0 | 75.5 | 68.5 | 71.5 | 79.3 |
E008 | chr6 | 78898298 | 78902618 | TRUE | OK | 495.0 | 0.00708 | 0.001005 | 0.1323 | -0.514 | -0.257 | 568.9 | 436.9 | 510.7 | 452.7 | 534.7 | 466.0 |
E009 | chr6 | 78902618 | 78902991 | TRUE | OK | 42.0 | 0.00793 | 0.02848 | 0.5452 | -0.511 | -0.256 | 41.4 | 46.9 | 47.3 | 31.8 | 37.2 | 47.4 |
E010 | chr6 | 78902991 | 78903101 | TRUE | OK | 12.6 | 0.021 | 0.07643 | 0.6728 | -0.714 | -0.357 | 13.8 | 16.7 | 13.1 | 6.9 | 8.8 | 16.4 |
E011 | chr6 | 78903101 | 78903102 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.0636 | 0.1067 | NA | NA | NA | 2.0 | 4.2 | 3.0 | 1.0 | 1.0 | 1.9 |
E012 | chr6 | 78903102 | 78903110 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0646 | 0.2784 | NA | NA | NA | 2.0 | 4.2 | 3.0 | 1.0 | 1.0 | 3.9 |
E013 | chr6 | 78945407 | 78946440 | TRUE | OK | 722.3 | 0.0039 | 1.338e-06 | 0.001069 | 0.590 | 0.294 | 628.1 | 542.2 | 565.1 | 894.5 | 786.4 | 917.5 |
J014 | chr6 | 78867891 | 78885377 | TRUE | OK | 60.8 | 0.0109 | 0.9745 | 0.9938 | 0.007 | 0.004 | 70.0 | 50.1 | 44.3 | 62.5 | 53.9 | 84.1 |
J015 | chr6 | 78872135 | 78885377 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.075 | 0.1792 | NA | NA | NA | 1.0 | 2.1 | 2.0 | 0.0 | 1.0 | 1.0 |
J016 | chr6 | 78885443 | 78897828 | TRUE | OK | 75.3 | 0.00725 | 0.1782 | 0.7483 | -0.267 | -0.134 | 85.8 | 58.4 | 79.6 | 70.5 | 62.7 | 94.7 |
J017 | chr6 | 78897959 | 78898063 | TRUE | OK | 69.5 | 0.00283 | 0.474 | 0.8475 | -0.123 | -0.061 | 69.0 | 54.2 | 73.5 | 68.5 | 70.5 | 81.2 |
J018 | chr6 | 78897959 | 78902991 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.0828 | 0.1863 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 1.0 | 0.0 | 1.0 |
J019 | chr6 | 78898298 | 78902618 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.0853 | 0.6069 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 2.0 | 1.0 | 1.0 |
J020 | chr6 | 78898298 | 78902991 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J021 | chr6 | 78903110 | 78945407 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N022 | chr6 | 78868088 | 78885377 | TRUE | OK | 16.6 | 0.00837 | 0.9344 | 0.9845 | 0.024 | 0.012 | 17.7 | 16.7 | 10.1 | 19.9 | 19.6 | 15.5 |
N023 | chr6 | 78941330 | 78945299 | TRUE | OK | 276.8 | 0.00769 | 0.7627 | 0.9391 | 0.061 | 0.030 | 248.5 | 253.4 | 234.7 | 343.5 | 265.4 | 315.2 |
N024 | chr6 | 78945497 | 78946000 | TRUE | OK | 255.0 | 0.0043 | 0.00615 | 0.3229 | 0.375 | 0.187 | 210.0 | 171.0 | 229.6 | 295.9 | 284.0 | 339.4 |
N025 | chr6 | 78946260 | 78946710 | TRUE | OK | 273.2 | 0.00693 | 0.0002853 | 0.06304 | 0.582 | 0.291 | 242.6 | 195.0 | 172.2 | 364.4 | 296.7 | 368.4 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000146243.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |