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Normalized Counts Table (ENSG00000143578.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr1	153967533	153967884	TRUE	OK	125.6	0.00283	0.04339	0.6052	-0.292	-0.146	103.5	113.7	100.7	137.0	147.9	150.8
E002	chr1	153967891	153967901	TRUE	OK	23.4	0.00881	0.5008	0.8559	-0.188	-0.094	18.7	16.7	22.2	20.8	28.4	33.8
E003	chr1	153967901	153967920	TRUE	OK	34.3	0.0122	0.7874	0.9463	-0.055	-0.027	28.6	21.9	29.2	27.8	51.9	46.4
E004	chr1	153967920	153967924	TRUE	OK	40.5	0.011	0.2831	0.786	0.303	0.152	27.6	21.9	31.2	37.7	64.6	59.9
E005	chr1	153967924	153968164	TRUE	OK	123.9	0.0099	0.116	0.713	0.335	0.167	92.7	71.9	81.6	130.1	197.8	169.2
E006	chr1	153968164	153968184	TRUE	OK	25.5	0.00683	0.02005	0.4924	0.682	0.341	15.8	15.6	11.1	29.8	40.2	40.6
E007	chr1	153968236	153968242	FALSE	LOW_COUNTS_INDEP_FILTER	5.2	0.0593	0.2843	NA	NA	NA	3.0	3.1	2.0	3.0	6.9	13.5
E008	chr1	153968242	153968258	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.0555	0.8155	NA	NA	NA	6.9	4.2	4.0	3.0	6.9	13.5
E009	chr1	153968258	153968260	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.0895	0.4369	NA	NA	NA	5.9	4.2	5.0	2.0	3.9	12.6
E010	chr1	153968260	153968263	FALSE	LOW_COUNTS_INDEP_FILTER	5.9	0.115	0.53	NA	NA	NA	5.9	4.2	5.0	2.0	3.9	14.5
E011	chr1	153968263	153968309	TRUE	OK	9.8	0.188	0.4969	0.8546	-0.277	-0.139	12.8	4.2	8.1	2.0	7.8	24.2
E012	chr1	153968309	153968310	FALSE	LOW_COUNTS_INDEP_FILTER	8.2	0.197	0.2756	NA	NA	NA	11.8	4.2	8.1	1.0	5.9	18.4
E013	chr1	153968310	153968361	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.265	0.4262	NA	NA	NA	1.0	1.0	0.0	0.0	2.0	6.8
E014	chr1	153968521	153968639	TRUE	OK	177.0	0.00293	0.7059	0.9216	-0.053	-0.026	131.1	149.1	129.9	204.5	214.5	233.0
E015	chr1	153968639	153968699	TRUE	OK	116.0	0.00646	0.8479	0.9626	-0.034	-0.017	89.7	89.7	87.6	140.0	129.3	159.5
E016	chr1	153968699	153968929	TRUE	OK	20.3	0.0107	0.4797	0.8492	0.244	0.122	13.8	10.4	17.1	18.9	30.4	30.9
E017	chr1	153968929	153968968	TRUE	OK	153.5	0.00863	0.1599	0.7389	0.272	0.136	109.4	97.0	107.8	183.7	186.1	236.9
E018	chr1	153968968	153969176	TRUE	OK	213.7	0.00257	0.283	0.786	0.139	0.069	150.9	165.8	146.0	233.3	272.2	314.2
E019	chr1	153969176	153969311	TRUE	OK	26.1	0.0682	0.4998	0.8556	0.309	0.155	6.9	17.7	27.2	21.8	36.2	46.4
E020	chr1	153969311	153969333	TRUE	OK	18.1	0.0603	0.238	0.7715	0.600	0.300	9.9	4.2	17.1	16.9	27.4	32.9
E021	chr1	153969333	153969354	TRUE	OK	112.7	0.00365	0.9914	0.9979	0.004	0.002	90.7	86.5	78.6	117.1	138.1	165.3
E022	chr1	153969354	153969395	TRUE	OK	117.3	0.00496	0.4645	0.8442	0.125	0.063	90.7	92.8	70.5	129.1	141.0	179.8
E023	chr1	153969395	153969455	TRUE	OK	130.9	0.00302	0.02562	0.5289	0.332	0.166	96.6	88.6	75.5	148.9	179.2	196.3
E024	chr1	153969455	153969458	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.111	0.4701	NA	NA	NA	3.9	3.1	5.0	3.0	8.8	21.3
E025	chr1	153969635	153969753	TRUE	OK	19.3	0.0649	0.1012	0.6991	0.875	0.437	14.8	3.1	11.1	16.9	32.3	37.7
E026	chr1	153972743	153972768	TRUE	OK	111.0	0.00291	0.3378	0.8033	0.152	0.076	82.8	80.3	74.5	115.2	155.7	157.6
E027	chr1	153972768	153972836	TRUE	OK	141.2	0.00242	0.03081	0.5554	0.301	0.151	101.6	99.1	84.6	158.8	201.7	201.1
E028	chr1	153972836	153972971	TRUE	OK	34.4	0.0132	0.1263	0.7209	0.466	0.233	22.7	21.9	19.1	33.8	64.6	44.5
E029	chr1	153972971	153973019	TRUE	OK	151.0	0.00335	0.1613	0.7397	0.203	0.101	112.4	106.4	98.7	177.7	214.5	196.3
E030	chr1	153973019	153973072	TRUE	OK	224.6	0.00604	0.01772	0.4736	0.376	0.188	155.8	141.8	148.1	284.9	304.6	312.3
E031	chr1	153973072	153973078	TRUE	OK	188.7	0.0101	0.04482	0.61	0.389	0.195	138.0	107.4	124.9	238.3	254.6	268.8
E032	chr1	153973078	153973080	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.0232	0.4819	NA	NA	NA	4.9	6.3	7.1	4.0	10.8	8.7
E033	chr1	153973194	153973263	TRUE	OK	222.3	0.00516	0.004084	0.2701	0.435	0.217	160.7	137.6	133.0	276.0	306.5	320.0
E034	chr1	153973379	153973464	TRUE	OK	243.9	0.00325	0.001631	0.172	0.411	0.205	165.6	161.6	152.1	303.8	334.9	345.2
E035	chr1	153973619	153973716	TRUE	OK	219.2	0.00245	0.1566	0.7375	0.174	0.087	164.7	163.7	140.0	256.1	295.7	294.9
E036	chr1	153973871	153974131	TRUE	OK	260.0	0.0021	0.9156	0.9802	0.011	0.006	179.5	229.4	180.3	279.0	337.9	353.9
E037	chr1	153974131	153974356	TRUE	OK	191.0	0.0128	0.001052	0.1358	-0.726	-0.363	159.7	248.2	142.0	174.7	211.5	209.8
E038	chr1	153974356	153974359	TRUE	OK	95.8	0.0131	1.256e-06	0.00101	-1.146	-0.573	97.6	144.9	77.6	78.4	94.0	82.2
E039	chr1	153974359	153974361	TRUE	OK	94.8	0.0134	9.116e-07	0.0007684	-1.170	-0.585	96.6	144.9	77.6	76.4	93.0	80.2
J040	chr1	153967884	153968521	TRUE	OK	30.8	0.0429	0.3435	0.805	-0.450	-0.225	13.8	40.7	29.2	37.7	33.3	30.0
J041	chr1	153968164	153968521	TRUE	OK	46.3	0.00416	0.6499	0.9043	0.100	0.050	36.5	28.2	36.3	53.6	62.7	60.9
J042	chr1	153968184	153968521	TRUE	OK	17.7	0.00815	0.1571	0.7379	0.476	0.238	10.8	12.5	9.1	24.8	28.4	20.3
J043	chr1	153968310	153968521	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.169	0.1275	NA	NA	NA	10.8	3.1	8.1	1.0	3.9	11.6
J044	chr1	153968361	153968521	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J045	chr1	153968639	153968929	TRUE	OK	37.7	0.00386	0.1745	0.7461	0.316	0.158	26.6	21.9	26.2	43.7	53.9	54.1
J046	chr1	153968699	153968929	TRUE	OK	78.6	0.00642	0.4888	0.8524	0.135	0.068	50.3	62.6	56.4	98.3	88.1	116.0
J047	chr1	153969176	153969333	TRUE	OK	87.1	0.0025	0.4449	0.8378	-0.120	-0.060	74.0	76.1	57.4	90.3	103.8	120.9
J048	chr1	153969455	153969635	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.166	0.05905	NA	NA	NA	3.0	0.0	0.0	8.9	2.9	7.7
J049	chr1	153969455	153972743	TRUE	OK	81.4	0.00331	0.2297	0.769	0.211	0.105	65.1	55.3	49.4	87.4	106.7	124.7
J050	chr1	153969753	153972743	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.179	0.9951	NA	NA	NA	3.0	0.0	1.0	1.0	1.0	4.8
J051	chr1	153972836	153972971	TRUE	OK	94.3	0.00253	0.09045	0.6892	0.264	0.132	62.1	75.1	55.4	114.2	136.1	122.8
J052	chr1	153973078	153973194	TRUE	OK	177.6	0.00766	0.01363	0.434	0.439	0.219	127.2	101.1	112.8	225.4	240.9	258.1
J053	chr1	153973263	153973379	TRUE	OK	177.2	0.0046	0.0006338	0.1023	0.522	0.261	121.3	102.2	105.8	227.3	247.8	259.1
J054	chr1	153973464	153973619	TRUE	OK	142.2	0.00503	0.01506	0.4488	0.393	0.196	108.5	87.6	80.6	177.7	198.8	200.1
J055	chr1	153973716	153973871	TRUE	OK	151.4	0.00169	0.2658	0.7811	0.143	0.072	104.5	115.7	105.8	168.8	212.5	201.1

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000143578.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE