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Normalized Counts Table (ENSG00000141562.18)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr17	82458179	82458184	TRUE	OK	19.1	0.00987	0.05666	0.6413	0.601	0.300	11.8	24.0	12.1	20.8	22.5	23.2
E002	chr17	82458184	82458193	TRUE	OK	19.8	0.0107	0.08849	0.6873	0.532	0.266	10.8	26.1	14.1	20.8	22.5	24.2
E003	chr17	82458193	82458227	TRUE	OK	31.4	0.00738	0.8728	0.9691	0.050	0.025	26.6	33.4	36.3	22.8	33.3	35.8
E004	chr17	82458227	82458358	TRUE	OK	58.5	0.0107	0.7264	0.9283	0.092	0.046	53.2	53.2	70.5	47.7	62.7	63.8
E005	chr17	82458358	82458508	TRUE	OK	82.5	0.0175	0.8688	0.9681	0.056	0.028	79.9	70.9	101.7	63.5	84.2	94.7
E006	chr17	82458508	82458517	TRUE	OK	27.8	0.0313	0.4984	0.8552	-0.264	-0.132	24.7	25.0	44.3	23.8	28.4	20.3
E007	chr17	82458648	82458663	TRUE	OK	27.5	0.0233	0.4194	0.83	-0.282	-0.141	42.4	25.0	26.2	23.8	24.5	23.2
E008	chr17	82458663	82458696	TRUE	OK	38.8	0.0337	0.7752	0.9428	-0.127	-0.064	59.2	31.3	35.3	38.7	34.3	33.8
E009	chr17	82458696	82458697	TRUE	OK	35.0	0.0331	0.2363	0.7712	-0.444	-0.222	56.2	34.4	34.2	34.7	23.5	27.1
E010	chr17	82458697	82458702	TRUE	OK	44.0	0.0114	0.2747	0.7831	-0.275	-0.137	60.1	46.9	42.3	39.7	38.2	36.7
E011	chr17	82458702	82458710	TRUE	OK	78.4	0.0144	0.9953	0.9988	0.001	0.001	100.6	71.9	71.5	70.5	81.3	74.4
E012	chr17	82458710	82458711	TRUE	OK	80.5	0.0165	0.814	0.9537	0.058	0.029	103.5	70.9	71.5	70.5	85.2	81.2
E013	chr17	82458711	82458713	TRUE	OK	98.8	0.0227	0.7651	0.9398	0.077	0.039	128.2	79.2	92.7	87.4	108.7	96.7
E014	chr17	82458713	82458723	TRUE	OK	118.7	0.0203	0.7062	0.9217	0.093	0.047	148.9	95.9	113.8	110.2	121.4	121.8
E015	chr17	82458723	82458725	TRUE	OK	118.5	0.0168	0.5701	0.8781	0.138	0.069	142.0	97.0	113.8	110.2	124.4	123.8
E016	chr17	82458725	82458740	TRUE	OK	140.6	0.0112	0.4559	0.8414	0.159	0.079	153.8	121.0	141.0	132.0	144.9	150.8
E017	chr17	82458740	82458745	TRUE	OK	166.0	0.00985	0.5128	0.8601	0.131	0.065	183.4	149.1	163.2	156.9	168.4	175.0
E018	chr17	82458745	82458753	TRUE	OK	216.2	0.00845	0.43	0.833	0.144	0.072	233.7	200.2	209.5	208.5	217.4	228.2
E019	chr17	82458753	82458830	TRUE	OK	402.6	0.0121	0.3521	0.808	0.185	0.092	437.8	359.7	387.8	397.1	423.0	409.9
E020	chr17	82458874	82459123	TRUE	OK	23.5	0.0392	0.3966	0.8227	-0.301	-0.150	31.6	20.9	28.2	12.9	31.3	16.4
E021	chr17	82459274	82459448	TRUE	OK	20.7	0.0677	0.7491	0.935	-0.051	-0.025	27.6	17.7	20.1	7.9	17.6	32.9
E022	chr17	82459991	82459999	TRUE	OK	406.2	0.0132	0.2384	0.7716	0.243	0.122	426.0	346.2	401.9	399.1	433.8	430.2
E023	chr17	82459999	82460072	TRUE	OK	647.5	0.0119	0.3654	0.8121	0.180	0.090	667.5	588.1	661.7	632.4	666.9	668.1
E024	chr17	82460072	82460323	FALSE	LOW_COUNTS_INDEP_FILTER	9.1	0.0256	0.6621	NA	NA	NA	9.9	5.2	11.1	6.0	11.8	10.6
E025	chr17	82460323	82460705	FALSE	LOW_COUNTS_INDEP_FILTER	8.8	0.0218	0.8151	NA	NA	NA	10.8	8.3	9.1	7.9	11.8	4.8
E026	chr17	82460970	82461014	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.147	0.0341	NA	NA	NA	1.0	2.1	0.0	6.9	1.0	5.8
E027	chr17	82464286	82464430	TRUE	OK	886.8	0.0123	0.7045	0.9211	0.082	0.041	923.9	848.8	932.7	851.8	902.9	860.5
E028	chr17	82468498	82468763	TRUE	OK	10.3	0.0767	0.9331	0.9842	-0.020	-0.010	12.8	6.3	13.1	14.9	9.8	4.8
E029	chr17	82468763	82468787	TRUE	OK	594.8	0.00847	0.8483	0.9627	0.039	0.019	605.4	603.7	624.5	579.8	607.2	548.2
E030	chr17	82468787	82468799	TRUE	OK	553.6	0.00872	0.959	0.9905	0.015	0.008	575.8	561.0	581.2	543.1	542.5	518.2
E031	chr17	82468799	82468863	TRUE	OK	667.6	0.00851	0.6419	0.9017	-0.069	-0.034	707.0	715.3	698.0	652.3	632.6	600.4
E032	chr17	82468863	82468896	TRUE	OK	463.9	0.00823	0.5469	0.871	-0.093	-0.047	524.6	501.5	459.3	444.8	413.3	439.9
E033	chr17	82472563	82472614	TRUE	OK	535.0	0.00634	0.9284	0.9831	-0.011	-0.005	574.8	594.4	503.6	527.2	493.6	516.3
E034	chr17	82472614	82472618	TRUE	OK	409.7	0.00325	0.8328	0.9586	0.026	0.013	434.8	459.8	372.7	381.2	409.3	400.3
E035	chr17	82472618	82472698	TRUE	OK	546.6	0.00439	0.6625	0.9083	0.054	0.027	572.9	614.2	490.5	525.2	519.0	557.9
E036	chr17	82478570	82478667	TRUE	OK	65.7	0.00419	2.057e-06	0.001514	0.883	0.441	42.4	56.3	48.3	65.5	88.1	93.8
E037	chr17	82478799	82478827	TRUE	OK	463.0	0.00478	0.8805	0.9712	0.023	0.011	500.9	503.6	429.1	433.8	442.6	467.9
E038	chr17	82478827	82478918	TRUE	OK	606.5	0.00417	0.9578	0.9902	0.004	0.002	618.2	717.4	553.0	585.7	556.2	608.1
E039	chr17	82478918	82479206	TRUE	OK	17.9	0.0353	0.005668	0.3117	1.213	0.606	16.8	10.4	7.1	14.9	26.4	31.9
E040	chr17	82479937	82479993	TRUE	OK	38.1	0.0334	0.0732	0.6678	0.716	0.358	23.7	33.4	34.2	24.8	46.0	66.7
E041	chr17	82480406	82480467	TRUE	OK	52.9	0.0161	0.0003942	0.07686	0.996	0.498	34.5	43.8	34.2	43.7	70.5	90.9
E042	chr17	82480467	82480544	TRUE	OK	57.9	0.0154	3.696e-05	0.01497	1.115	0.558	33.5	49.0	34.2	50.6	79.3	100.6
E043	chr17	82480544	82480998	TRUE	OK	80.0	0.0228	0.002589	0.218	0.898	0.449	47.3	79.2	51.4	60.6	129.3	112.2
E044	chr17	82480998	82481080	TRUE	OK	43.5	0.00949	0.04711	0.6172	0.502	0.251	35.5	41.7	36.3	32.8	62.7	52.2
E045	chr17	82481080	82481081	TRUE	OK	31.3	0.00637	0.09903	0.697	0.422	0.211	25.6	30.2	28.2	25.8	39.2	38.7
E046	chr17	82481081	82481093	TRUE	OK	424.4	0.00475	0.7615	0.9388	-0.045	-0.022	415.1	536.0	389.8	401.1	367.2	437.0
E047	chr17	82481093	82481211	TRUE	OK	594.5	0.00198	0.825	0.9565	-0.022	-0.011	578.8	728.9	558.0	543.1	551.3	607.2
E048	chr17	82481211	82481218	TRUE	OK	15.2	0.0183	0.6296	0.8975	0.194	0.097	15.8	10.4	18.1	13.9	19.6	13.5
E049	chr17	82481812	82481835	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.0574	0.6007	NA	NA	NA	5.9	2.1	3.0	1.0	3.9	2.9
E050	chr17	82483173	82483186	TRUE	OK	13.4	0.0124	0.1083	0.7057	0.609	0.305	11.8	9.4	12.1	13.9	18.6	14.5
E051	chr17	82483186	82483304	TRUE	OK	30.4	0.0375	0.249	0.7752	0.453	0.226	36.5	16.7	27.2	25.8	42.1	33.8
E052	chr17	82483715	82483742	TRUE	OK	417.8	0.00118	0.1265	0.7212	0.130	0.065	396.4	472.4	383.8	389.2	430.9	434.1
E053	chr17	82483742	82483779	TRUE	OK	463.2	0.00123	0.5487	0.8716	0.052	0.026	456.5	537.0	429.1	416.0	465.2	475.7
E054	chr17	82483779	82483816	TRUE	OK	53.7	0.00534	5.93e-05	0.02149	0.831	0.415	40.4	39.6	42.3	60.6	61.7	77.3
E055	chr17	82483816	82484321	TRUE	OK	135.6	0.00555	2.169e-06	0.001587	0.784	0.392	109.4	101.1	106.8	136.0	179.2	180.8
E056	chr17	82484321	82484538	TRUE	OK	109.1	0.0227	0.1538	0.7362	0.447	0.223	82.8	115.7	92.7	69.5	144.0	149.9
E057	chr17	82484538	82484807	TRUE	OK	141.1	0.0188	0.1422	0.7313	0.409	0.204	117.3	155.4	109.8	94.3	184.1	185.6
E058	chr17	82484807	82484812	TRUE	OK	58.3	0.00563	0.04171	0.5999	0.417	0.209	52.3	60.5	44.3	46.7	70.5	75.4
E059	chr17	82484812	82484900	TRUE	OK	653.1	0.00126	0.3081	0.7938	-0.079	-0.040	650.8	810.2	620.4	557.9	620.9	658.4
E060	chr17	82484900	82484930	TRUE	OK	553.8	0.00189	0.1596	0.7388	-0.130	-0.065	551.2	718.4	521.7	461.6	515.1	555.0
E061	chr17	82484930	82484950	TRUE	OK	563.8	0.00194	0.2524	0.7761	-0.107	-0.053	554.1	723.6	533.8	479.5	519.0	572.4
E062	chr17	82485496	82485654	TRUE	OK	955.6	0.00798	0.05229	0.6312	-0.325	-0.162	920.9	1395.2	905.5	764.4	822.6	925.3
E063	chr17	82487915	82488062	TRUE	OK	862.9	0.0148	0.1362	0.7274	-0.348	-0.174	781.9	1334.7	814.8	693.0	700.2	852.7
E064	chr17	82488062	82488065	TRUE	OK	346.0	0.0132	0.1607	0.7393	-0.317	-0.159	314.5	541.2	326.3	291.9	263.4	338.4
E065	chr17	82488065	82488201	TRUE	OK	398.5	0.0128	0.1861	0.7512	-0.303	-0.151	356.9	627.7	369.7	330.6	320.2	385.8
E066	chr17	82488201	82488215	TRUE	OK	126.1	0.01	0.1949	0.7559	-0.286	-0.143	110.4	201.2	117.8	99.3	106.7	120.9
E067	chr17	82488215	82488220	TRUE	OK	119.9	0.00929	0.2005	0.7582	-0.274	-0.137	106.5	189.8	110.8	91.3	104.8	116.0
E068	chr17	82488220	82488255	TRUE	OK	121.1	0.00901	0.1382	0.7286	-0.308	-0.154	107.5	191.9	115.8	91.3	102.8	117.0
E069	chr17	82488255	82488258	TRUE	OK	47.7	0.00451	0.9005	0.9763	-0.026	-0.013	41.4	59.4	49.4	45.7	45.0	45.4
E070	chr17	82488258	82488259	TRUE	OK	45.4	0.00441	0.7246	0.9276	-0.073	-0.037	41.4	58.4	45.3	41.7	43.1	42.5
E071	chr17	82488259	82488261	TRUE	OK	44.4	0.00453	0.6399	0.9011	-0.098	-0.049	39.4	58.4	45.3	38.7	43.1	41.6
E072	chr17	82488261	82488262	TRUE	OK	23.6	0.00737	0.8248	0.9564	-0.057	-0.028	20.7	28.2	26.2	17.9	25.5	23.2
E073	chr17	82488262	82488263	TRUE	OK	20.4	0.00857	0.7821	0.945	0.090	0.045	16.8	22.9	22.2	16.9	24.5	19.3
E074	chr17	82488263	82488265	TRUE	OK	16.8	0.0101	0.6617	0.9081	0.152	0.076	13.8	18.8	17.1	13.9	21.5	15.5
E075	chr17	82488265	82490537	TRUE	OK	162.8	0.0108	0.2264	0.7676	-0.230	-0.115	190.3	195.0	159.1	146.9	168.4	117.0
J076	chr17	82458508	82459274	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J077	chr17	82458508	82459991	FALSE	LOW_COUNTS_INDEP_FILTER	8.3	0.0347	0.5574	NA	NA	NA	12.8	8.3	7.1	5.0	4.9	11.6
J078	chr17	82458517	82459991	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.226	0.1244	NA	NA	NA	1.0	0.0	2.0	0.0	0.0	0.0
J079	chr17	82458830	82459991	TRUE	OK	371.3	0.0125	0.2675	0.7814	0.224	0.112	397.4	323.2	358.6	371.3	389.8	387.7
J080	chr17	82458830	82459999	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.0539	0.1145	NA	NA	NA	3.0	6.3	0.0	6.0	3.9	7.7
J081	chr17	82459123	82459991	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.716	0.3681	NA	NA	NA	0.0	0.0	0.0	2.0	0.0	0.0
J082	chr17	82459448	82459991	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J083	chr17	82460072	82464286	TRUE	OK	500.2	0.0115	0.3687	0.8131	0.177	0.089	510.8	448.4	519.7	472.6	516.1	533.7
J084	chr17	82460072	82468763	FALSE	LOW_COUNTS_INDEP_FILTER	4.8	0.0343	0.1111	NA	NA	NA	0.0	6.3	4.0	6.0	4.9	7.7
J085	chr17	82460323	82464286	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.584	0.9875	NA	NA	NA	2.0	0.0	0.0	0.0	2.0	0.0
J086	chr17	82460705	82460970	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J087	chr17	82464430	82468763	TRUE	OK	526.5	0.00841	0.8605	0.966	0.036	0.018	538.4	527.6	558.0	509.3	536.6	489.2
J088	chr17	82468896	82472563	TRUE	OK	423.5	0.00585	0.4233	0.8309	-0.109	-0.055	468.4	474.4	420.0	401.1	372.1	405.1
J089	chr17	82468896	82478570	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.267	0.984	NA	NA	NA	1.0	0.0	0.0	0.0	1.0	0.0
J090	chr17	82468896	82478799	FALSE	LOW_COUNTS_INDEP_FILTER	8.6	0.0134	0.7	NA	NA	NA	10.8	6.3	8.1	8.9	7.8	9.7
J091	chr17	82472698	82478570	TRUE	OK	41.4	0.00444	4.946e-09	8.803e-06	1.309	0.655	21.7	30.2	24.2	42.7	64.6	64.8
J092	chr17	82472698	82478799	TRUE	OK	358.7	0.00777	0.9341	0.9844	-0.014	-0.007	406.2	393.1	323.3	352.4	332.0	345.2
J093	chr17	82478667	82478799	TRUE	OK	44.2	0.00887	0.003951	0.2651	0.698	0.349	24.7	41.7	40.3	38.7	61.7	58.0
J094	chr17	82478918	82479937	TRUE	OK	24.8	0.0335	0.07674	0.6735	0.730	0.365	12.8	25.0	21.2	15.9	31.3	42.5
J095	chr17	82478918	82480406	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.194	0.8182	NA	NA	NA	0.0	1.0	3.0	2.0	0.0	1.0
J096	chr17	82478918	82481081	TRUE	OK	370.8	0.00546	0.3258	0.7998	-0.144	-0.072	368.8	489.0	348.5	347.5	305.5	365.5
J097	chr17	82480544	82481081	TRUE	OK	10.4	0.0132	0.0005197	0.09087	1.505	0.753	4.9	8.3	4.0	15.9	10.8	18.4
J098	chr17	82481211	82481812	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.691	0.3925	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	0.0
J099	chr17	82481211	82483715	TRUE	OK	306.0	0.000989	0.66	0.9075	0.041	0.021	299.7	356.6	286.1	273.0	300.6	320.0
J100	chr17	82481218	82483173	FALSE	LOW_COUNTS_INDEP_FILTER	7.4	0.0167	0.292	NA	NA	NA	5.9	5.2	8.1	7.9	11.8	5.8
J101	chr17	82481835	82483186	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.5768	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J102	chr17	82483304	82483715	TRUE	OK	20.6	0.0734	0.4945	0.8539	0.376	0.188	26.6	9.4	20.1	14.9	33.3	19.3
J103	chr17	82483742	82488201	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J104	chr17	82483779	82484812	TRUE	OK	348.1	0.00103	0.5561	0.8736	-0.049	-0.024	354.0	424.4	323.3	304.8	334.9	347.1
J105	chr17	82483779	82485496	FALSE	LOW_COUNTS_INDEP_FILTER	7.1	0.0901	0.6577	NA	NA	NA	3.9	4.2	12.1	8.9	3.9	9.7
J106	chr17	82484930	82485496	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.485	0.3979	NA	NA	NA	1.0	6.3	0.0	0.0	2.0	0.0
J107	chr17	82484930	82488220	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0438	0.31	NA	NA	NA	3.0	2.1	3.0	1.0	2.0	1.0
J108	chr17	82484950	82485496	TRUE	OK	472.2	0.00188	0.0778	0.6747	-0.168	-0.084	482.2	620.4	442.2	406.1	424.0	458.3
J109	chr17	82485654	82487915	TRUE	OK	596.1	0.0129	0.1468	0.7333	-0.317	-0.159	550.2	923.8	549.9	458.7	493.6	600.4

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000141562.18
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE