Normalized Counts Table (ENSG00000140398.13)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr15	75346954	75346989	TRUE	OK	15.8	0.0623	0.6353	0.8995	-0.224	-0.112	11.8	28.2	10.1	5.0	16.6	23.2
E002	chr15	75346989	75347012	TRUE	OK	16.6	0.0697	0.8996	0.976	-0.016	-0.008	11.8	27.1	10.1	5.0	19.6	26.1
E003	chr15	75347012	75347037	TRUE	OK	16.6	0.0406	0.8183	0.9548	0.105	0.052	11.8	26.1	9.1	7.9	19.6	25.1
E004	chr15	75347037	75347052	TRUE	OK	16.4	0.0193	0.4144	0.8285	0.320	0.160	10.8	21.9	10.1	8.9	22.5	24.2
E005	chr15	75347052	75347068	TRUE	OK	16.3	0.0134	0.8997	0.976	0.055	0.027	11.8	21.9	13.1	9.9	16.6	24.2
E006	chr15	75347068	75347089	TRUE	OK	16.9	0.0145	0.6893	0.9165	0.163	0.082	14.8	19.8	12.1	9.9	18.6	26.1
E007	chr15	75347089	75347098	TRUE	OK	15.0	0.0158	0.5907	0.8849	0.231	0.116	13.8	15.6	11.1	7.9	18.6	23.2
E008	chr15	75347098	75347110	TRUE	OK	15.5	0.0136	0.6523	0.9051	0.189	0.094	14.8	15.6	12.1	8.9	18.6	23.2
E009	chr15	75347110	75347202	TRUE	OK	23.5	0.0143	0.3337	0.802	0.333	0.167	19.7	25.0	16.1	15.9	26.4	37.7
E010	chr15	75347202	75347246	TRUE	OK	20.9	0.0152	0.05554	0.6389	0.656	0.328	20.7	16.7	10.1	19.9	27.4	30.9
E011	chr15	75347246	75347341	TRUE	OK	25.8	0.0572	0.3543	0.8088	0.369	0.185	28.6	29.2	8.1	24.8	27.4	36.7
E012	chr15	75347341	75347382	TRUE	OK	24.3	0.0803	0.5503	0.8719	0.254	0.127	27.6	30.2	7.1	20.8	21.5	38.7
E013	chr15	75347382	75347391	TRUE	OK	20.5	0.0881	0.6494	0.9042	0.158	0.079	24.7	27.1	5.0	16.9	19.6	30.0
E014	chr15	75347391	75347434	TRUE	OK	20.2	0.0777	0.4688	0.8457	0.310	0.155	23.7	24.0	5.0	17.9	20.6	30.0
E015	chr15	75347434	75347473	TRUE	OK	18.2	0.0788	0.7643	0.9396	0.088	0.044	22.7	24.0	5.0	14.9	16.6	26.1
E016	chr15	75347618	75347637	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.0243	0.8156	NA	NA	NA	3.9	6.3	7.1	4.0	6.9	5.8
E017	chr15	75347637	75347652	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.0243	0.8156	NA	NA	NA	3.9	6.3	7.1	4.0	6.9	5.8
E018	chr15	75347652	75347726	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.0195	0.6969	NA	NA	NA	4.9	10.4	8.1	5.0	9.8	6.8
E019	chr15	75347726	75347834	TRUE	OK	13.3	0.0316	0.5128	0.8601	-0.264	-0.132	17.7	10.4	14.1	10.9	16.6	9.7
E020	chr15	75347834	75347859	TRUE	OK	14.5	0.0443	0.8433	0.9614	0.147	0.073	16.8	8.3	15.1	8.9	22.5	15.5
E021	chr15	75347859	75347871	TRUE	OK	17.0	0.0557	0.6425	0.9019	0.253	0.126	21.7	8.3	15.1	11.9	23.5	21.3
E022	chr15	75347871	75347958	TRUE	OK	28.9	0.0511	0.9943	0.9986	0.033	0.017	34.5	16.7	32.2	19.9	40.2	30.0
E023	chr15	75347958	75347980	TRUE	OK	27.4	0.053	0.8278	0.9572	0.129	0.065	29.6	14.6	32.2	17.9	36.2	33.8
E024	chr15	75347980	75347999	TRUE	OK	26.7	0.0505	0.5702	0.8782	0.283	0.141	29.6	13.6	27.2	18.9	36.2	34.8
E025	chr15	75347999	75348026	TRUE	OK	14.5	0.0619	0.6695	0.9102	-0.183	-0.092	20.7	8.3	16.1	7.9	19.6	14.5
E026	chr15	75348026	75348222	TRUE	OK	14.3	0.13	0.8852	0.9723	-0.143	-0.072	24.7	5.2	14.1	9.9	21.5	10.6
E027	chr15	75348398	75348420	FALSE	LOW_COUNTS_INDEP_FILTER	3.3	0.087	0.8846	NA	NA	NA	4.9	4.2	1.0	4.0	4.9	1.0
E028	chr15	75348420	75348646	TRUE	OK	14.4	0.0505	0.4164	0.8291	0.454	0.227	15.8	13.6	6.0	7.9	25.5	17.4
E029	chr15	75348646	75348651	FALSE	LOW_COUNTS_INDEP_FILTER	9.5	0.0942	0.2664	NA	NA	NA	10.8	6.3	3.0	4.0	17.6	15.5
E030	chr15	75348651	75348723	TRUE	OK	10.9	0.078	0.4619	0.8433	0.506	0.253	13.8	7.3	5.0	5.0	18.6	15.5
E031	chr15	75348883	75348934	TRUE	OK	35.1	0.0262	0.1868	0.7516	0.510	0.255	31.6	24.0	29.2	23.8	46.0	56.1
E032	chr15	75348934	75348971	TRUE	OK	32.3	0.0237	0.08325	0.6811	0.614	0.307	30.6	20.9	23.2	28.8	38.2	52.2
E033	chr15	75348971	75349024	TRUE	OK	35.8	0.028	0.2815	0.7853	0.414	0.207	35.5	24.0	30.2	28.8	40.2	56.1
E034	chr15	75349024	75349057	TRUE	OK	36.1	0.0286	0.145	0.7325	0.523	0.262	37.5	21.9	27.2	34.7	44.1	51.2
E035	chr15	75349057	75349098	TRUE	OK	36.3	0.0186	0.02988	0.5519	0.676	0.338	34.5	22.9	24.2	38.7	48.0	49.3
E036	chr15	75349098	75349151	TRUE	OK	42.4	0.00744	0.04177	0.6002	0.497	0.248	38.5	33.4	31.2	38.7	54.8	58.0
E037	chr15	75349151	75349170	TRUE	OK	38.8	0.0147	0.2347	0.7706	0.372	0.186	37.5	31.3	30.2	27.8	54.8	51.2
E038	chr15	75349170	75349301	TRUE	OK	57.7	0.00514	0.09742	0.6964	0.350	0.175	48.3	54.2	46.3	44.7	76.4	76.4
E039	chr15	75349301	75349339	TRUE	OK	34.4	0.00648	0.2732	0.783	0.262	0.131	19.7	42.8	29.2	31.8	39.2	43.5
E040	chr15	75349339	75349690	TRUE	OK	30.0	0.00696	0.2358	0.771	0.318	0.159	19.7	33.4	25.2	22.8	44.1	34.8
E041	chr15	75351300	75351376	TRUE	OK	13.0	0.0312	0.04201	0.6007	0.913	0.457	3.9	8.3	14.1	13.9	15.7	22.2
E042	chr15	75351945	75352031	TRUE	OK	21.2	0.0103	0.336	0.8028	0.292	0.146	12.8	22.9	20.1	24.8	26.4	20.3
E043	chr15	75352031	75352061	TRUE	OK	22.4	0.00849	0.4058	0.8255	0.248	0.124	15.8	24.0	20.1	22.8	30.4	21.3
E044	chr15	75352061	75352110	TRUE	OK	25.9	0.00729	0.1364	0.7274	0.409	0.205	15.8	27.1	22.2	27.8	34.3	28.0
E045	chr15	75352110	75352179	TRUE	OK	43.9	0.00505	0.03121	0.5576	0.476	0.238	25.6	43.8	38.3	37.7	58.8	59.0
E046	chr15	75352179	75352230	TRUE	OK	48.2	0.00513	0.02335	0.5148	0.486	0.243	27.6	49.0	41.3	41.7	61.7	67.7
E047	chr15	75352323	75352387	TRUE	OK	48.5	0.00698	0.06092	0.6494	0.418	0.209	28.6	50.1	43.3	46.7	52.9	69.6
E048	chr15	75352601	75352701	TRUE	OK	50.0	0.00894	0.17	0.7442	0.331	0.166	31.6	48.0	50.4	41.7	56.8	71.5
E049	chr15	75352701	75352963	TRUE	OK	52.4	0.00589	0.721	0.9263	0.082	0.041	34.5	57.3	57.4	40.7	61.7	62.8
E050	chr15	75352963	75352977	TRUE	OK	20.2	0.00821	0.8285	0.9573	0.070	0.035	16.8	21.9	19.1	19.9	23.5	20.3
E051	chr15	75352977	75353153	TRUE	OK	41.6	0.0133	0.8862	0.9727	0.054	0.027	37.5	38.6	43.3	39.7	54.8	35.8
E052	chr15	75353153	75353390	TRUE	OK	61.6	0.00497	0.1668	0.7426	0.281	0.140	50.3	54.2	58.4	56.6	77.4	72.5
E053	chr15	75353390	75353738	TRUE	OK	78.6	0.00394	0.006212	0.324	0.475	0.237	57.2	77.2	59.4	83.4	92.1	102.5
E054	chr15	75353738	75353866	TRUE	OK	68.8	0.0178	0.516	0.8611	0.158	0.079	66.1	78.2	46.3	77.4	78.3	66.7
E055	chr15	75353866	75354249	TRUE	OK	112.2	0.00396	0.0302	0.5525	0.358	0.179	84.8	109.5	95.7	89.4	143.0	150.8
E056	chr15	75354249	75354277	TRUE	OK	56.0	0.02	0.04855	0.6218	0.600	0.300	29.6	48.0	53.4	41.7	72.5	90.9
E057	chr15	75354277	75354292	TRUE	OK	43.0	0.0189	0.003554	0.2527	0.927	0.464	24.7	30.2	32.2	31.8	61.7	77.3
E058	chr15	75354292	75354430	TRUE	OK	61.2	0.0058	8.028e-06	0.004627	0.926	0.463	32.5	45.9	46.3	58.6	85.2	98.6
E059	chr15	75354430	75354492	TRUE	OK	56.8	0.0164	0.166	0.7424	0.330	0.165	29.6	68.8	49.4	66.5	60.7	65.7
E060	chr15	75354602	75354652	TRUE	OK	33.8	0.0135	0.7444	0.9338	-0.110	-0.055	27.6	45.9	29.2	37.7	34.3	28.0
E061	chr15	75354652	75354818	TRUE	OK	72.7	0.00571	0.4546	0.8409	-0.150	-0.075	61.1	103.2	59.4	59.6	85.2	67.7
E062	chr15	75354963	75355215	TRUE	OK	59.8	0.00727	0.7254	0.9279	0.098	0.049	53.2	66.7	49.4	41.7	84.2	63.8
E063	chr15	75355215	75355245	TRUE	OK	16.3	0.0372	0.2547	0.7773	0.476	0.238	3.9	18.8	17.1	11.9	24.5	21.3
E064	chr15	75355245	75355247	FALSE	LOW_COUNTS_INDEP_FILTER	9.4	0.0519	0.2056	NA	NA	NA	1.0	9.4	11.1	7.9	12.7	14.5
E065	chr15	75355247	75355251	FALSE	LOW_COUNTS_INDEP_FILTER	9.3	0.0357	0.09389	NA	NA	NA	1.0	8.3	10.1	7.9	13.7	14.5
E066	chr15	75355251	75357114	TRUE	OK	859.2	0.00539	0.002312	0.2068	-0.448	-0.223	720.8	1136.6	824.9	704.9	909.8	858.6
J067	chr15	75347110	75347202	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J068	chr15	75347110	75347246	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J069	chr15	75347473	75347834	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.6027	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J070	chr15	75347473	75347958	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.6024	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J071	chr15	75347473	75348883	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.15	0.1316	NA	NA	NA	1.0	0.0	2.0	3.0	1.0	6.8
J072	chr15	75347473	75352323	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J073	chr15	75347871	75347958	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.353	0.733	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	1.9
J074	chr15	75347999	75348420	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J075	chr15	75347999	75348883	TRUE	OK	12.0	0.0172	0.05374	0.6344	0.828	0.414	8.9	5.2	11.1	9.9	16.6	20.3
J076	chr15	75348026	75348420	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J077	chr15	75348026	75348883	FALSE	LOW_COUNTS_INDEP_FILTER	6.1	0.02	0.6465	NA	NA	NA	5.9	5.2	5.0	3.0	6.9	10.6
J078	chr15	75348646	75348883	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J079	chr15	75348723	75348883	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.557	0.4715	NA	NA	NA	3.0	0.0	0.0	0.0	5.9	1.9
J080	chr15	75349339	75351300	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.0362	0.01102	NA	NA	NA	0.0	0.0	3.0	4.0	5.9	4.8
J081	chr15	75349339	75352031	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.119	0.737	NA	NA	NA	0.0	0.0	2.0	1.0	1.0	1.0
J082	chr15	75349339	75352110	TRUE	OK	9.7	0.0294	0.9783	0.9948	-0.025	-0.013	5.9	17.7	5.0	6.9	9.8	12.6
J083	chr15	75349339	75352323	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.433	0.7992	NA	NA	NA	1.0	0.0	3.0	1.0	0.0	5.8
J084	chr15	75351376	75352031	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.6027	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J085	chr15	75352230	75352323	TRUE	OK	19.6	0.00867	0.8087	0.9522	0.075	0.037	10.8	25.0	20.1	15.9	18.6	27.1
J086	chr15	75352387	75352601	TRUE	OK	20.8	0.0198	0.1733	0.7455	0.488	0.244	9.9	18.8	22.2	18.9	21.5	33.8
J087	chr15	75352701	75353738	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0788	0.07959	NA	NA	NA	1.0	0.0	3.0	6.0	3.9	2.9
J088	chr15	75352701	75354249	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.272	0.2643	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
J089	chr15	75353866	75354249	TRUE	OK	10.8	0.0103	0.6842	0.915	-0.167	-0.083	7.9	15.6	10.1	10.9	11.8	8.7
J090	chr15	75354277	75354430	FALSE	LOW_COUNTS_INDEP_FILTER	9.4	0.0196	0.6459	NA	NA	NA	3.9	15.6	10.1	7.9	11.8	6.8
J091	chr15	75354492	75354652	TRUE	OK	20.3	0.0219	0.4635	0.8439	0.210	0.105	9.9	32.3	13.1	19.9	23.5	23.2
J092	chr15	75354818	75354963	TRUE	OK	23.1	0.0259	0.9321	0.984	0.023	0.011	19.7	29.2	18.1	11.9	38.2	21.3
N093	chr15	75356032	75356109	TRUE	OK	211.1	0.011	0.1934	0.7554	-0.301	-0.150	162.7	327.4	184.3	165.8	229.2	197.2
N094	chr15	75356219	75356300	TRUE	OK	177.1	0.00362	0.003104	0.2377	-0.422	-0.211	152.8	251.3	182.3	147.9	172.4	155.7
N095	chr15	75356380	75356605	TRUE	OK	17.6	0.0403	0.1957	0.7562	-0.563	-0.281	19.7	14.6	27.2	14.9	18.6	10.6
N096	chr15	75356449	75356605	TRUE	OK	183.5	0.00184	0.4159	0.829	-0.096	-0.048	161.7	225.2	166.2	160.8	190.0	197.2
N097	chr15	75356685	75356792	TRUE	OK	187.2	0.00253	0.6531	0.9054	0.059	0.029	154.8	204.4	178.3	173.7	217.4	194.3
N098	chr15	75356902	75358200	TRUE	OK	209.0	0.00369	0.3819	0.8177	0.118	0.059	185.4	234.6	169.2	194.6	248.7	221.4

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000140398.13
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE