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Normalized Counts Table (ENSG00000140199.11)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr15	34229995	34233258	TRUE	OK	2018.2	0.0376	0.03786	0.5856	-0.621	-0.310	1620.0	1740.3	1497.7	2436.3	2367.9	2447.1
E002	chr15	34233258	34233261	TRUE	OK	85.7	0.0129	0.1695	0.7442	0.299	0.150	67.0	30.2	60.4	130.1	99.9	126.7
E003	chr15	34233261	34233262	TRUE	OK	86.6	0.014	0.169	0.7438	0.306	0.153	68.0	30.2	60.4	135.0	100.9	124.7
E004	chr15	34233262	34233711	TRUE	OK	295.8	0.00711	0.1087	0.7063	0.240	0.120	237.6	134.5	191.4	409.0	356.5	445.7
E005	chr15	34233711	34233880	TRUE	OK	218.6	0.0118	0.4399	0.8362	0.125	0.062	179.5	91.8	166.2	278.0	272.2	323.9
E006	chr15	34233880	34233972	TRUE	OK	207.6	0.0157	0.3957	0.8224	0.152	0.076	151.8	83.4	175.3	272.0	273.2	290.1
E007	chr15	34235180	34235314	TRUE	OK	231.5	0.0226	0.1283	0.7223	0.344	0.172	158.7	78.2	183.3	318.7	330.0	320.0
E008	chr15	34236014	34236199	TRUE	OK	221.8	0.0096	0.001252	0.1495	0.573	0.287	150.9	75.1	135.0	322.7	327.1	320.0
E009	chr15	34236707	34236815	TRUE	OK	152.7	0.0136	0.03414	0.5706	0.429	0.215	123.3	53.2	88.6	202.5	215.4	233.0
E010	chr15	34237083	34237389	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.0458	0.6933	NA	NA	NA	3.9	1.0	4.0	2.0	4.9	6.8
E011	chr15	34237389	34237418	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.126	0.9572	NA	NA	NA	1.0	0.0	5.0	3.0	4.9	2.9
E012	chr15	34237418	34237480	TRUE	OK	126.1	0.0089	0.06944	0.6616	0.330	0.165	103.5	49.0	76.5	176.7	158.6	192.4
E013	chr15	34237480	34237550	TRUE	OK	128.7	0.0169	0.1147	0.7119	0.357	0.179	106.5	46.9	77.6	175.7	150.8	214.6
E014	chr15	34238231	34238331	TRUE	OK	161.3	0.00921	0.03856	0.5882	0.368	0.184	122.3	59.4	106.8	225.4	210.5	243.6
E015	chr15	34238331	34238396	TRUE	OK	146.3	0.00727	0.04924	0.6236	0.334	0.167	108.5	57.3	99.7	212.5	181.2	218.5
E016	chr15	34238396	34238401	TRUE	OK	120.2	0.00822	0.1229	0.7185	0.281	0.141	92.7	49.0	81.6	181.7	141.0	175.0
E017	chr15	34238401	34238710	FALSE	LOW_COUNTS_INDEP_FILTER	8.1	0.0511	0.7087	NA	NA	NA	7.9	1.0	10.1	7.9	12.7	8.7
E018	chr15	34238964	34239160	TRUE	OK	211.2	0.0134	0.1035	0.7012	0.324	0.162	150.9	82.4	153.1	317.7	246.8	316.2
E019	chr15	34240660	34240829	TRUE	OK	136.1	0.0137	0.184	0.7504	0.279	0.140	106.5	53.2	93.7	196.6	151.8	214.6
E020	chr15	34240829	34241044	TRUE	OK	12.3	0.0621	0.1425	0.7314	0.851	0.425	8.9	2.1	6.0	9.9	27.4	19.3
E021	chr15	34241062	34241232	TRUE	OK	11.8	0.0362	0.05168	0.6295	1.005	0.502	5.9	2.1	7.1	11.9	25.5	18.4
E022	chr15	34241232	34241337	TRUE	OK	112.7	0.00489	0.05197	0.6302	0.314	0.157	89.7	45.9	70.5	160.8	142.0	167.3
E023	chr15	34242101	34242221	TRUE	OK	143.5	0.0184	0.4127	0.8279	0.152	0.076	119.3	51.1	112.8	194.6	184.1	199.2
E024	chr15	34243973	34244072	TRUE	OK	150.4	0.0295	0.4243	0.8311	0.161	0.080	137.1	48.0	110.8	220.4	187.0	199.2
E025	chr15	34245284	34245340	TRUE	OK	132.1	0.0199	0.3865	0.8192	0.167	0.084	117.3	45.9	95.7	188.6	166.5	178.9
E026	chr15	34245340	34245403	TRUE	OK	134.2	0.0232	0.263	0.7799	0.245	0.123	109.4	42.8	101.7	186.6	184.1	180.8
E027	chr15	34245692	34245867	TRUE	OK	162.9	0.0116	0.2377	0.7714	0.209	0.104	133.1	62.6	117.8	224.4	207.6	232.0
E028	chr15	34250297	34250355	TRUE	OK	106.6	0.00891	0.5357	0.8673	0.108	0.054	85.8	45.9	82.6	150.9	120.5	153.7
E029	chr15	34250630	34250729	TRUE	OK	110.2	0.0101	0.1371	0.7277	0.299	0.149	87.8	46.9	68.5	162.8	122.4	173.1
E030	chr15	34250898	34251057	TRUE	OK	144.0	0.0183	0.1804	0.749	0.289	0.144	128.2	54.2	84.6	228.3	184.1	184.7
E031	chr15	34252169	34252384	TRUE	OK	157.8	0.0277	0.4072	0.8261	0.158	0.079	153.8	53.2	103.7	224.4	200.8	210.8
E032	chr15	34254347	34254589	TRUE	OK	174.2	0.0297	0.2464	0.7744	0.261	0.130	163.7	55.3	108.8	238.3	220.3	259.1
E033	chr15	34255261	34255392	TRUE	OK	144.6	0.0193	0.02404	0.5195	0.523	0.262	107.5	41.7	90.7	210.5	205.6	211.7
E034	chr15	34256228	34256235	TRUE	OK	81.1	0.0136	0.03705	0.5831	0.470	0.235	67.0	26.1	44.3	109.2	113.6	126.7
E035	chr15	34256235	34256283	TRUE	OK	93.5	0.0135	0.03644	0.5806	0.457	0.228	77.9	31.3	50.4	127.1	130.2	144.1
E036	chr15	34257641	34257788	TRUE	OK	141.7	0.0222	0.1471	0.7334	0.329	0.165	122.3	45.9	89.6	184.7	211.5	196.3
E037	chr15	34258812	34258872	TRUE	OK	139.1	0.0232	0.5338	0.8667	0.107	0.053	116.3	48.0	115.8	181.7	183.1	189.5
E038	chr15	34258872	34258944	TRUE	OK	130.0	0.0355	0.5317	0.8659	0.108	0.054	118.3	38.6	104.8	171.8	171.4	175.0
E039	chr15	34260925	34260929	TRUE	OK	98.9	0.0438	0.6289	0.8973	0.070	0.035	91.7	27.1	83.6	143.0	113.6	134.4
E040	chr15	34260929	34260977	TRUE	OK	123.1	0.0272	0.6179	0.8938	0.072	0.036	111.4	40.7	99.7	170.8	158.6	157.6
E041	chr15	34260977	34261020	TRUE	OK	137.1	0.0383	0.3913	0.8208	0.200	0.100	108.5	39.6	116.8	193.6	195.9	168.2
E042	chr15	34275344	34275389	TRUE	OK	127.7	0.0321	0.2145	0.7631	0.308	0.154	106.5	35.5	92.7	173.7	183.1	175.0
E043	chr15	34299568	34299636	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E044	chr15	34299636	34299658	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E045	chr15	34318560	34318779	TRUE	OK	87.7	0.0285	0.8302	0.9578	-0.005	-0.003	83.8	29.2	72.5	104.2	125.3	111.2
E046	chr15	34336409	34336601	TRUE	OK	75.8	0.0408	0.01207	0.4158	0.845	0.423	45.4	12.5	48.3	114.2	111.6	122.8
E047	chr15	34336601	34336667	TRUE	OK	51.3	0.0368	0.02998	0.552	0.755	0.378	30.6	9.4	35.3	75.5	63.7	93.8
E048	chr15	34336667	34336686	TRUE	OK	40.4	0.0133	0.03408	0.5705	0.590	0.295	25.6	11.5	27.2	58.6	48.0	71.5
E049	chr15	34336686	34336752	TRUE	OK	51.6	0.0128	0.005944	0.3184	0.732	0.366	28.6	16.7	31.2	82.4	58.8	91.8
E050	chr15	34336752	34336844	TRUE	OK	55.7	0.0102	0.009797	0.389	0.620	0.310	39.4	16.7	31.2	85.4	67.6	93.8
E051	chr15	34336844	34337331	TRUE	OK	127.8	0.0153	2.827e-05	0.01217	0.981	0.491	79.9	32.3	55.4	202.5	171.4	225.3
E052	chr15	34337331	34337474	TRUE	OK	58.0	0.0147	1.793e-05	0.008729	1.165	0.582	35.5	12.5	20.1	86.4	84.2	109.3
E053	chr15	34337474	34337742	TRUE	OK	64.2	0.0046	1.867e-07	0.0002071	1.073	0.537	35.5	14.6	29.2	105.2	95.0	105.4
E054	chr15	34337742	34337752	TRUE	OK	34.8	0.0105	0.003749	0.2585	0.818	0.409	22.7	9.4	17.1	63.5	49.9	46.4
E055	chr15	34337752	34337757	TRUE	OK	35.0	0.00947	0.002805	0.2266	0.827	0.414	22.7	9.4	17.1	62.5	51.9	46.4
E056	chr15	34337757	34337760	TRUE	OK	35.2	0.0103	0.002859	0.2289	0.836	0.418	23.7	9.4	16.1	62.5	52.9	46.4
E057	chr15	34337760	34337786	TRUE	OK	37.3	0.0136	0.004131	0.2716	0.836	0.418	24.7	10.4	17.1	67.5	57.8	46.4
E058	chr15	34337786	34337960	TRUE	OK	39.0	0.0105	0.004229	0.274	0.777	0.389	25.6	11.5	19.1	68.5	59.7	49.3
E059	chr15	34337960	34338057	FALSE	LOW_COUNTS_INDEP_FILTER	7.7	0.0336	0.2713	NA	NA	NA	4.9	2.1	5.0	16.9	9.8	7.7
E060	chr15	34338057	34338060	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.857	1	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J061	chr15	34233972	34235180	TRUE	OK	129.8	0.0415	0.1757	0.7468	0.385	0.192	80.9	35.5	113.8	183.7	183.1	181.8
J062	chr15	34235314	34236014	TRUE	OK	133.1	0.00427	0.0008541	0.1212	0.515	0.257	86.8	48.0	86.6	195.6	195.9	185.6
J063	chr15	34236199	34236707	TRUE	OK	96.8	0.00842	0.006669	0.3326	0.526	0.263	73.0	30.2	56.4	141.0	135.1	145.0
J064	chr15	34236815	34237389	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.194	0.6317	NA	NA	NA	0.0	0.0	2.0	1.0	3.9	1.0
J065	chr15	34236815	34237418	TRUE	OK	97.5	0.011	0.05325	0.6334	0.392	0.196	83.8	37.5	50.4	133.0	131.2	148.9
J066	chr15	34237550	34238231	TRUE	OK	93.8	0.0142	0.05347	0.6339	0.438	0.219	74.0	31.3	56.4	131.0	114.6	155.7
J067	chr15	34238331	34238964	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.0808	0.3545	NA	NA	NA	2.0	0.0	1.0	6.0	1.0	3.9
J068	chr15	34238401	34238964	TRUE	OK	115.1	0.00747	0.09259	0.691	0.306	0.153	86.8	48.0	76.5	174.7	132.2	172.1
J069	chr15	34239160	34240660	TRUE	OK	87.2	0.0158	0.1045	0.7022	0.388	0.194	57.2	30.2	66.5	134.0	100.9	134.4
J070	chr15	34240829	34241232	TRUE	OK	63.2	0.0103	0.5563	0.8736	0.131	0.065	55.2	30.2	40.3	90.3	64.6	98.6
J071	chr15	34241337	34242101	TRUE	OK	70.4	0.00328	0.05238	0.6316	0.343	0.172	51.3	28.2	47.3	95.3	90.1	110.2
J072	chr15	34242221	34243973	TRUE	OK	101.9	0.0248	0.6657	0.9091	0.057	0.029	94.7	34.4	80.6	141.0	131.2	129.6
J073	chr15	34244072	34245284	TRUE	OK	107.1	0.0319	0.3598	0.8107	0.212	0.106	94.7	31.3	79.6	155.9	134.2	147.0
J074	chr15	34245403	34245692	TRUE	OK	91.6	0.00619	0.02716	0.5384	0.398	0.199	69.0	31.3	60.4	134.0	129.3	125.7
J075	chr15	34245867	34250297	TRUE	OK	88.7	0.0104	0.4295	0.8328	0.151	0.075	70.0	34.4	70.5	120.1	104.8	132.5
J076	chr15	34250355	34250630	TRUE	OK	67.3	0.0106	0.5545	0.8731	0.133	0.067	56.2	31.3	46.3	94.3	68.5	107.3
J077	chr15	34250729	34250898	TRUE	OK	73.2	0.0104	0.1499	0.7346	0.314	0.157	61.1	31.3	41.3	117.1	82.3	106.4
J078	chr15	34251057	34252169	TRUE	OK	79.4	0.0407	0.2332	0.7702	0.343	0.171	74.0	20.9	48.3	130.1	106.7	96.7
J079	chr15	34252384	34254347	TRUE	OK	73.5	0.0297	0.8841	0.9721	-0.032	-0.016	80.9	26.1	50.4	84.4	92.1	107.3
J080	chr15	34254589	34255261	TRUE	OK	89.3	0.00628	0.003531	0.2521	0.546	0.273	61.1	28.2	56.4	135.0	116.5	138.3
J081	chr15	34255392	34256228	TRUE	OK	78.2	0.0178	0.04593	0.6134	0.487	0.243	65.1	22.9	43.3	105.2	110.7	121.8
J082	chr15	34256283	34257641	TRUE	OK	72.2	0.0215	0.04528	0.6117	0.522	0.261	62.1	20.9	36.3	98.3	102.8	113.1
J083	chr15	34256283	34258812	FALSE	LOW_COUNTS_INDEP_FILTER	3.9	0.0582	0.6327	NA	NA	NA	3.0	0.0	4.0	3.0	4.9	8.7
J084	chr15	34257788	34258812	TRUE	OK	88.0	0.0185	0.5277	0.8648	0.124	0.062	79.9	32.3	63.5	107.2	133.2	112.2
J085	chr15	34258944	34260925	TRUE	OK	97.3	0.0459	0.6664	0.9093	0.055	0.027	90.7	27.1	82.6	141.0	110.7	131.5
J086	chr15	34261020	34275344	TRUE	OK	98.9	0.0238	0.2763	0.7836	0.258	0.129	80.9	31.3	73.5	139.0	146.9	121.8
J087	chr15	34261020	34299568	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J088	chr15	34261020	34336409	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.0249	0.7995	NA	NA	NA	3.0	2.1	2.0	5.0	5.9	3.9
J089	chr15	34275389	34299568	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J090	chr15	34275389	34318560	TRUE	OK	58.8	0.0364	0.8498	0.9632	-0.008	-0.004	51.3	17.7	55.4	67.5	86.2	74.4
J091	chr15	34275389	34336409	TRUE	OK	42.8	0.0182	0.0006124	0.09986	1.028	0.514	27.6	6.3	20.1	68.5	69.5	64.8
J092	chr15	34336601	34337331	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J093	chr15	34336601	34337474	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J094	chr15	34336601	34337960	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J095	chr15	34336667	34337331	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.29	0.3564	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	1.0
J096	chr15	34336667	34337960	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.9679	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J097	chr15	34336686	34337960	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J098	chr15	34336752	34337331	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J099	chr15	34336752	34337960	FALSE	LOW_COUNTS_INDEP_FILTER	0.6	0.951	0.5488	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	3.9

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000140199.11
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE