Normalized Counts Table (ENSG00000139197.10)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr12	7188684	7188723	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E002	chr12	7188723	7188810	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.274	0.5879	NA	NA	NA	1.0	6.3	4.0	1.0	0.0	5.8
E003	chr12	7189162	7189212	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.224	0.3156	NA	NA	NA	1.0	0.0	0.0	2.0	0.0	1.0
E004	chr12	7189212	7189531	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.132	0.1023	NA	NA	NA	2.0	0.0	0.0	2.0	3.9	1.0
E005	chr12	7189583	7189610	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E006	chr12	7189610	7189660	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E007	chr12	7189660	7189685	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.724	0.5079	NA	NA	NA	1.0	0.0	0.0	0.0	3.9	0.0
E008	chr12	7189685	7189686	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.471	0.1721	NA	NA	NA	1.0	0.0	0.0	0.0	5.9	1.0
E009	chr12	7189686	7189696	FALSE	LOW_COUNTS_INDEP_FILTER	3.4	0.174	0.03381	NA	NA	NA	3.0	1.0	0.0	3.0	10.8	2.9
E010	chr12	7189696	7189706	TRUE	OK	14.7	0.0513	0.0006305	0.1019	1.745	0.872	11.8	8.3	3.0	23.8	27.4	13.5
E011	chr12	7189706	7189714	TRUE	OK	23.9	0.0089	8.584e-07	0.0007267	1.471	0.735	16.8	14.6	12.1	38.7	34.3	27.1
E012	chr12	7189714	7189750	TRUE	OK	59.4	0.0106	0.003154	0.2398	0.690	0.345	57.2	41.7	53.4	76.4	70.5	57.0
E013	chr12	7189750	7189844	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.359	0.7445	NA	NA	NA	0.0	1.0	1.0	3.0	0.0	0.0
E014	chr12	7189844	7189955	TRUE	OK	38.6	0.0172	0.1167	0.7134	-0.448	-0.224	55.2	45.9	42.3	36.7	19.6	31.9
E015	chr12	7189955	7189980	TRUE	OK	44.3	0.0116	0.04833	0.6212	-0.500	-0.250	64.1	52.1	50.4	39.7	25.5	33.8
E016	chr12	7189980	7190021	TRUE	OK	53.7	0.0192	0.1667	0.7426	-0.396	-0.198	82.8	54.2	59.4	49.6	38.2	37.7
E017	chr12	7190021	7190088	TRUE	OK	70.1	0.0195	0.3143	0.7959	-0.285	-0.143	106.5	67.8	74.5	63.5	54.8	53.2
E018	chr12	7190088	7190152	TRUE	OK	72.0	0.0214	0.8737	0.9693	-0.049	-0.025	100.6	62.6	75.5	71.5	68.5	53.2
E019	chr12	7190152	7190216	TRUE	OK	83.4	0.0237	0.8637	0.9668	-0.065	-0.032	116.3	66.7	94.7	72.5	79.3	70.6
E020	chr12	7190216	7190360	TRUE	OK	33.0	0.00723	0.3064	0.7934	0.261	0.130	36.5	29.2	33.2	33.8	37.2	28.0
E021	chr12	7190360	7190361	TRUE	OK	26.7	0.0138	0.1145	0.7119	0.488	0.244	25.6	22.9	25.2	30.8	36.2	19.3
E022	chr12	7190361	7190484	TRUE	OK	269.6	0.0155	0.1617	0.7399	0.315	0.157	276.1	223.1	301.2	303.8	284.0	229.1
E023	chr12	7190484	7190524	TRUE	OK	247.3	0.0192	0.3213	0.7984	0.246	0.123	247.5	204.4	298.1	289.9	238.0	205.9
E024	chr12	7190524	7190569	TRUE	OK	21.6	0.0285	0.5599	0.8747	0.216	0.108	15.8	18.8	31.2	24.8	24.5	14.5
E025	chr12	7190569	7190793	FALSE	LOW_COUNTS_INDEP_FILTER	7.7	0.0218	0.5606	NA	NA	NA	4.9	11.5	11.1	6.9	4.9	6.8
E026	chr12	7190811	7190887	FALSE	LOW_COUNTS_INDEP_FILTER	4.2	0.0382	0.3639	NA	NA	NA	3.9	4.2	8.1	3.0	3.9	1.9
E027	chr12	7190887	7190923	TRUE	OK	232.3	0.0226	0.281	0.7852	0.282	0.141	228.8	181.4	286.1	273.0	229.2	195.3
E028	chr12	7191225	7191348	TRUE	OK	331.1	0.017	0.3439	0.8051	0.214	0.107	377.6	273.2	365.6	356.4	308.5	305.5
E029	chr12	7191348	7191356	TRUE	OK	161.8	0.0186	0.5646	0.8764	0.132	0.066	212.0	140.8	155.1	150.9	145.9	166.3
E030	chr12	7191356	7191358	TRUE	OK	160.8	0.0185	0.5514	0.8722	0.138	0.069	210.0	140.8	153.1	149.9	144.0	167.3
E031	chr12	7191568	7191571	TRUE	OK	165.0	0.0198	0.6244	0.896	0.113	0.057	217.9	141.8	161.2	156.9	144.0	168.2
E032	chr12	7191571	7191594	TRUE	OK	179.7	0.0207	0.6191	0.8942	0.115	0.058	238.6	153.3	175.3	167.8	159.6	183.7
E033	chr12	7191594	7191700	TRUE	OK	251.5	0.015	0.4911	0.853	0.152	0.076	302.7	224.2	258.9	240.3	216.4	266.8
E034	chr12	7199010	7199113	TRUE	OK	293.8	0.00577	0.9335	0.9843	0.016	0.008	324.4	297.2	334.4	266.1	257.6	283.3
E035	chr12	7201734	7201750	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0393	0.9998	NA	NA	NA	5.9	11.5	4.0	6.9	2.9	7.7
E036	chr12	7201750	7201791	TRUE	OK	245.1	0.00713	0.7228	0.9269	-0.057	-0.028	241.6	263.8	309.2	208.5	206.6	240.7
E037	chr12	7201791	7201795	TRUE	OK	223.2	0.00717	0.9812	0.9955	0.006	0.003	215.9	239.8	273.0	184.7	197.8	228.2
E038	chr12	7201795	7201804	TRUE	OK	227.2	0.00688	0.9163	0.9803	-0.013	-0.006	224.8	247.1	274.0	186.6	196.8	234.0
E039	chr12	7201804	7201832	TRUE	OK	249.1	0.00577	0.9661	0.9921	-0.003	-0.002	249.5	265.9	300.2	213.4	216.4	249.4
E040	chr12	7201832	7201841	TRUE	OK	233.2	0.00578	0.968	0.9925	0.008	0.004	234.7	241.9	284.0	206.5	203.7	228.2
E041	chr12	7201841	7202226	TRUE	OK	9.7	0.0187	0.1386	0.7289	0.659	0.330	7.9	6.3	11.1	7.9	11.8	13.5
E042	chr12	7202240	7202336	TRUE	OK	199.3	0.00733	0.1056	0.7032	0.273	0.137	191.3	184.6	222.6	185.7	191.9	219.5
E043	chr12	7202336	7202343	TRUE	OK	157.3	0.0147	0.1204	0.7161	0.347	0.174	156.8	125.1	178.3	146.9	156.7	179.8
E044	chr12	7202343	7202351	TRUE	OK	153.0	0.0115	0.04846	0.6216	0.403	0.201	151.8	122.0	165.2	149.9	155.7	173.1
E045	chr12	7202611	7202704	TRUE	OK	357.8	0.00918	0.2592	0.7788	0.195	0.098	363.8	324.3	417.0	356.4	341.8	343.2
E046	chr12	7203431	7203455	TRUE	OK	257.7	0.00674	0.3065	0.7934	0.163	0.081	258.3	244.0	300.2	261.1	249.7	233.0
E047	chr12	7203455	7203550	TRUE	OK	361.6	0.00677	0.1807	0.7492	0.206	0.103	365.8	337.8	409.9	358.4	349.6	348.1
E048	chr12	7203550	7203551	TRUE	OK	215.2	0.0061	0.2304	0.7693	0.189	0.094	216.9	204.4	242.7	220.4	191.9	214.6
E049	chr12	7207658	7207802	TRUE	OK	344.4	0.00614	0.2816	0.7853	0.162	0.081	357.9	331.6	384.8	345.5	311.4	335.5
E050	chr12	7208009	7208080	TRUE	OK	298.1	0.00484	0.4269	0.832	0.112	0.056	314.5	294.0	334.4	288.9	274.2	282.3
E051	chr12	7208456	7208596	TRUE	OK	275.7	0.00267	0.6311	0.8981	0.058	0.029	285.9	294.0	306.2	244.2	262.4	261.0
E052	chr12	7208596	7208669	TRUE	OK	232.5	0.00178	0.2586	0.7785	-0.119	-0.060	253.4	282.6	250.8	195.6	203.7	208.8
E053	chr12	7209004	7209170	TRUE	OK	358.0	0.0016	0.7104	0.923	-0.035	-0.017	366.8	442.1	373.7	309.8	325.1	330.7
E054	chr12	7209682	7209840	TRUE	OK	387.2	0.00195	0.6517	0.905	0.045	0.023	390.5	459.8	399.9	357.4	384.9	330.7
E055	chr12	7210021	7210129	TRUE	OK	418.1	0.00122	0.3176	0.7967	0.086	0.043	404.3	480.7	450.2	392.2	393.7	387.7
E056	chr12	7210129	7210242	TRUE	OK	393.6	0.00121	0.7317	0.93	0.031	0.015	395.4	457.8	423.0	371.3	366.3	348.1
E057	chr12	7210242	7210256	TRUE	OK	268.6	0.00146	0.2915	0.7891	0.105	0.053	265.2	305.5	281.0	250.2	252.7	257.2
E058	chr12	7210256	7210262	TRUE	OK	226.3	0.00172	0.8089	0.9523	-0.025	-0.013	232.7	276.3	236.7	199.6	201.7	210.8
E059	chr12	7210262	7210431	TRUE	OK	365.4	0.00445	0.6041	0.8893	-0.065	-0.032	396.4	453.6	366.6	354.4	286.9	334.5
E060	chr12	7210431	7211480	TRUE	OK	1198.1	0.0119	0.2695	0.7822	-0.227	-0.114	1176.3	1716.3	1202.6	1048.4	991.0	1053.9
E061	chr12	7211480	7211483	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0806	0.5454	NA	NA	NA	2.0	3.1	2.0	1.0	0.0	2.9
E062	chr12	7212771	7212871	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.139	0.1637	NA	NA	NA	1.0	0.0	4.0	3.0	2.0	5.8
E063	chr12	7218401	7218571	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E064	chr12	7218571	7218574	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J065	chr12	7188810	7190361	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.28	0.5881	NA	NA	NA	1.0	6.3	4.0	1.0	0.0	5.8
J066	chr12	7188810	7190887	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J067	chr12	7189531	7190021	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J068	chr12	7189531	7190361	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.602	0.533	NA	NA	NA	1.0	0.0	0.0	0.0	2.9	0.0
J069	chr12	7189660	7190484	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J070	chr12	7189750	7190021	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.113	0.5035	NA	NA	NA	5.9	1.0	1.0	2.0	3.9	3.9
J071	chr12	7189750	7190361	TRUE	OK	55.4	0.00862	0.002262	0.2043	0.687	0.344	50.3	39.6	52.4	71.5	66.6	52.2
J072	chr12	7189750	7190887	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J073	chr12	7189980	7190361	FALSE	LOW_COUNTS_INDEP_FILTER	3.3	0.0498	0.6182	NA	NA	NA	2.0	4.2	6.0	1.0	2.0	4.8
J074	chr12	7190216	7190361	TRUE	OK	42.3	0.0213	0.9735	0.9936	0.001	0.001	54.2	36.5	47.3	34.7	49.9	30.9
J075	chr12	7190524	7190887	TRUE	OK	190.8	0.0213	0.2742	0.7831	0.282	0.141	188.3	150.2	232.7	224.4	188.0	161.5
J076	chr12	7190524	7191225	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.266	0.9243	NA	NA	NA	1.0	0.0	0.0	0.0	1.0	0.0
J077	chr12	7190569	7190887	TRUE	OK	13.1	0.0433	0.5	0.8556	0.326	0.163	8.9	10.4	19.1	13.9	18.6	7.7
J078	chr12	7190923	7191225	TRUE	OK	214.2	0.0228	0.3451	0.8056	0.248	0.124	214.0	168.9	265.9	250.2	205.6	180.8
J079	chr12	7191358	7191568	TRUE	OK	159.5	0.02	0.5783	0.8809	0.131	0.065	210.0	137.6	153.1	147.9	143.0	165.3
J080	chr12	7191700	7199010	TRUE	OK	161.5	0.0103	0.562	0.8756	0.115	0.057	190.3	147.0	172.2	155.9	141.0	162.4
J081	chr12	7191700	7201734	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.101	0.2316	NA	NA	NA	0.0	1.0	1.0	2.0	0.0	2.9
J082	chr12	7191700	7201750	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.262	0.4463	NA	NA	NA	1.0	4.2	7.1	1.0	0.0	4.8
J083	chr12	7199113	7201750	TRUE	OK	188.3	0.00298	0.6647	0.9089	-0.054	-0.027	185.4	213.8	226.6	165.8	156.7	181.8
J084	chr12	7201841	7202240	TRUE	OK	106.9	0.00677	0.9467	0.9874	0.016	0.008	105.5	111.6	130.9	88.4	92.1	113.1
J085	chr12	7201841	7202611	TRUE	OK	111.8	0.00467	0.9188	0.9811	-0.014	-0.007	114.4	112.6	140.0	106.2	98.9	98.6
J086	chr12	7202351	7202611	TRUE	OK	134.4	0.0113	0.03561	0.5768	0.433	0.216	136.1	104.3	141.0	137.0	136.1	151.8
J087	chr12	7202704	7203431	TRUE	OK	234.0	0.00762	0.2354	0.7709	0.199	0.099	240.6	211.7	267.9	238.3	228.2	217.5
J088	chr12	7202704	7203455	TRUE	OK	26.7	0.0097	0.3355	0.8026	0.269	0.134	19.7	25.0	35.3	24.8	25.5	30.0
J089	chr12	7203551	7207658	TRUE	OK	209.2	0.00525	0.1682	0.7433	0.207	0.103	207.1	200.2	234.7	215.4	186.1	211.7
J090	chr12	7207802	7208009	TRUE	OK	211.7	0.00533	0.2444	0.7737	0.176	0.088	228.8	201.2	225.6	217.4	192.9	204.0
J091	chr12	7208080	7208456	TRUE	OK	163.8	0.0041	0.4227	0.8307	0.117	0.059	166.6	160.6	189.4	150.9	153.7	161.5
J092	chr12	7208669	7209004	TRUE	OK	168.0	0.00228	0.276	0.7835	-0.133	-0.067	182.4	214.8	174.2	133.0	144.0	159.5
J093	chr12	7209170	7209682	TRUE	OK	213.9	0.00134	0.9776	0.9946	0.004	0.002	219.9	257.6	221.6	183.7	199.8	201.1
J094	chr12	7209840	7210021	TRUE	OK	219.1	0.00232	0.3651	0.8121	0.106	0.053	205.1	249.2	239.7	208.5	227.2	184.7
J095	chr12	7210242	7212771	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J096	chr12	7210242	7218401	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J097	chr12	7212871	7218401	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000139197.10
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE