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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr2 | 232550673 | 232550682 | TRUE | OK | 89.5 | 0.00722 | 0.3227 | 0.7987 | 0.189 | 0.095 | 100.6 | 78.2 | 97.7 | 96.3 | 80.3 | 84.1 |
E002 | chr2 | 232550682 | 232550688 | TRUE | OK | 120.8 | 0.00426 | 0.216 | 0.7635 | 0.193 | 0.096 | 130.2 | 112.6 | 129.9 | 127.1 | 109.7 | 115.1 |
E003 | chr2 | 232550688 | 232550690 | TRUE | OK | 123.9 | 0.00381 | 0.2071 | 0.7603 | 0.190 | 0.095 | 134.1 | 116.8 | 131.9 | 129.1 | 114.6 | 117.0 |
E004 | chr2 | 232550690 | 232550691 | TRUE | OK | 123.9 | 0.00381 | 0.2071 | 0.7603 | 0.190 | 0.095 | 134.1 | 116.8 | 131.9 | 129.1 | 114.6 | 117.0 |
E005 | chr2 | 232550691 | 232550703 | TRUE | OK | 157.4 | 0.00403 | 0.3374 | 0.8032 | 0.141 | 0.070 | 168.6 | 156.4 | 169.2 | 169.8 | 138.1 | 142.1 |
E006 | chr2 | 232550703 | 232550744 | TRUE | OK | 863.0 | 0.00808 | 0.05947 | 0.6468 | 0.295 | 0.148 | 927.8 | 778.9 | 899.4 | 851.8 | 814.8 | 905.0 |
E007 | chr2 | 232550805 | 232550806 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.0733 | 0.5441 | NA | NA | NA | 3.0 | 5.2 | 2.0 | 1.0 | 3.9 | 6.8 |
E008 | chr2 | 232550806 | 232551218 | TRUE | OK | 51.8 | 0.0056 | 0.0001613 | 0.04308 | 0.785 | 0.392 | 43.4 | 40.7 | 44.3 | 58.6 | 70.5 | 53.2 |
E009 | chr2 | 232553854 | 232553887 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.118 | 0.1431 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 1.0 | 2.0 | 2.9 |
E010 | chr2 | 232556415 | 232556530 | TRUE | OK | 1789.1 | 0.00442 | 0.246 | 0.7743 | 0.139 | 0.069 | 1936.5 | 1876.9 | 1878.5 | 1715.5 | 1566.8 | 1760.6 |
E011 | chr2 | 232556530 | 232556596 | TRUE | OK | 34.5 | 0.0269 | 0.3007 | 0.7917 | 0.344 | 0.172 | 32.5 | 22.9 | 45.3 | 38.7 | 40.2 | 27.1 |
E012 | chr2 | 232557528 | 232557648 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0355 | 0.01332 | NA | NA | NA | 3.0 | 3.1 | 2.0 | 4.0 | 6.9 | 9.7 |
E013 | chr2 | 232557883 | 232558018 | TRUE | OK | 2115.5 | 0.0031 | 0.3692 | 0.8133 | 0.092 | 0.046 | 2262.9 | 2322.1 | 2229.0 | 2020.3 | 1824.4 | 2034.2 |
E014 | chr2 | 232558018 | 232558824 | TRUE | OK | 39.4 | 0.00782 | 0.7059 | 0.9216 | 0.095 | 0.047 | 38.5 | 38.6 | 48.3 | 44.7 | 29.4 | 36.7 |
E015 | chr2 | 232564246 | 232564351 | TRUE | OK | 1724.9 | 0.00599 | 0.58 | 0.8813 | -0.068 | -0.034 | 1950.3 | 1995.8 | 1806.0 | 1600.4 | 1350.4 | 1646.5 |
E016 | chr2 | 232566828 | 232566943 | TRUE | OK | 1611.6 | 0.00324 | 0.2452 | 0.774 | -0.120 | -0.060 | 1748.2 | 2045.8 | 1646.8 | 1449.5 | 1320.1 | 1459.0 |
E017 | chr2 | 232566943 | 232566981 | TRUE | OK | 1123.5 | 0.00624 | 0.3461 | 0.8059 | -0.141 | -0.071 | 1131.0 | 1534.9 | 1158.3 | 986.8 | 942.1 | 988.1 |
E018 | chr2 | 232567077 | 232567205 | TRUE | OK | 1533.8 | 0.00478 | 0.6436 | 0.9022 | -0.066 | -0.033 | 1546.1 | 2026.0 | 1544.1 | 1388.9 | 1371.0 | 1326.5 |
E019 | chr2 | 232567205 | 232567214 | TRUE | OK | 1003.6 | 0.0036 | 0.5768 | 0.8804 | 0.052 | 0.026 | 997.8 | 1279.4 | 974.0 | 935.2 | 928.4 | 906.9 |
E020 | chr2 | 232567214 | 232567527 | TRUE | OK | 139.7 | 0.0138 | 0.4437 | 0.8375 | 0.175 | 0.087 | 149.9 | 123.0 | 161.2 | 112.2 | 157.7 | 134.4 |
E021 | chr2 | 232567527 | 232568020 | TRUE | OK | 172.0 | 0.0118 | 0.1079 | 0.7054 | 0.330 | 0.165 | 195.2 | 153.3 | 159.1 | 146.9 | 191.0 | 186.6 |
E022 | chr2 | 232568944 | 232569178 | TRUE | OK | 955.0 | 0.0123 | 0.9801 | 0.9952 | -0.026 | -0.013 | 880.5 | 1384.7 | 893.4 | 867.7 | 842.2 | 861.5 |
E023 | chr2 | 232569178 | 232569210 | TRUE | OK | 114.0 | 0.0348 | 0.544 | 0.87 | -0.284 | -0.142 | 97.6 | 213.8 | 95.7 | 92.3 | 77.4 | 107.3 |
E024 | chr2 | 232569740 | 232569833 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0222 | 0.1199 | NA | NA | NA | 3.0 | 6.3 | 7.1 | 8.9 | 6.9 | 7.7 |
E025 | chr2 | 232573720 | 232574073 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.8 | 0.0358 | 0.196 | NA | NA | NA | 7.9 | 4.2 | 5.0 | 8.9 | 10.8 | 3.9 |
E026 | chr2 | 232574073 | 232574136 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0674 | 0.09452 | NA | NA | NA | 2.0 | 0.0 | 2.0 | 5.0 | 2.9 | 1.9 |
E027 | chr2 | 232574262 | 232574341 | TRUE | OK | 56.3 | 0.0294 | 0.307 | 0.7936 | 0.322 | 0.161 | 63.1 | 35.5 | 67.5 | 67.5 | 57.8 | 46.4 |
E028 | chr2 | 232580903 | 232580956 | TRUE | OK | 173.4 | 0.0112 | 0.9348 | 0.9846 | 0.018 | 0.009 | 198.2 | 159.5 | 208.5 | 163.8 | 174.3 | 136.3 |
E029 | chr2 | 232580956 | 232581062 | TRUE | OK | 199.4 | 0.0144 | 0.7222 | 0.9267 | 0.076 | 0.038 | 236.6 | 172.0 | 230.7 | 197.6 | 199.8 | 159.5 |
E030 | chr2 | 232581062 | 232581332 | TRUE | OK | 383.2 | 0.0127 | 0.5398 | 0.8689 | 0.118 | 0.059 | 409.2 | 338.9 | 466.3 | 359.4 | 394.6 | 330.7 |
E031 | chr2 | 232581332 | 232583642 | TRUE | OK | 1567.2 | 0.00316 | 0.2801 | 0.7851 | -0.104 | -0.052 | 1741.3 | 1728.8 | 1801.9 | 1440.5 | 1350.4 | 1340.0 |
E032 | chr2 | 232583642 | 232583644 | TRUE | OK | 20.1 | 0.00842 | 0.2551 | 0.7775 | 0.348 | 0.174 | 20.7 | 18.8 | 19.1 | 18.9 | 23.5 | 19.3 |
J033 | chr2 | 232550744 | 232556415 | TRUE | OK | 850.0 | 0.00825 | 0.06943 | 0.6616 | 0.287 | 0.144 | 918.0 | 765.4 | 889.4 | 843.9 | 794.2 | 889.5 |
J034 | chr2 | 232551218 | 232553854 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J035 | chr2 | 232551218 | 232556415 | TRUE | OK | 41.8 | 0.0037 | 1.321e-05 | 0.006889 | 0.920 | 0.460 | 32.5 | 31.3 | 34.2 | 53.6 | 54.8 | 44.5 |
J036 | chr2 | 232553887 | 232556415 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J037 | chr2 | 232556530 | 232557528 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.498 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J038 | chr2 | 232556530 | 232557883 | TRUE | OK | 1525.4 | 0.00323 | 0.2272 | 0.7678 | 0.126 | 0.063 | 1634.8 | 1631.9 | 1592.4 | 1448.5 | 1329.9 | 1515.0 |
J039 | chr2 | 232556530 | 232564246 | TRUE | OK | 102.9 | 0.00317 | 0.9944 | 0.9986 | 0.004 | 0.002 | 118.3 | 105.3 | 113.8 | 98.3 | 82.3 | 99.6 |
J040 | chr2 | 232558018 | 232564246 | TRUE | OK | 1243.5 | 0.00658 | 0.7634 | 0.9394 | -0.034 | -0.017 | 1396.2 | 1418.1 | 1304.4 | 1152.6 | 957.7 | 1231.7 |
J041 | chr2 | 232564351 | 232566828 | TRUE | OK | 987.6 | 0.00337 | 0.542 | 0.8695 | -0.062 | -0.031 | 1111.2 | 1182.4 | 1003.2 | 911.4 | 791.3 | 926.2 |
J042 | chr2 | 232566981 | 232567077 | TRUE | OK | 974.6 | 0.00535 | 0.3439 | 0.8051 | -0.135 | -0.067 | 988.0 | 1343.0 | 984.1 | 842.9 | 819.7 | 870.2 |
J043 | chr2 | 232567214 | 232568944 | TRUE | OK | 737.2 | 0.00768 | 0.6189 | 0.8942 | 0.057 | 0.028 | 697.1 | 1004.1 | 681.9 | 704.9 | 660.0 | 674.9 |
J044 | chr2 | 232567214 | 232569740 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J045 | chr2 | 232567214 | 232574262 | TRUE | OK | 36.7 | 0.0508 | 0.3621 | 0.8114 | 0.343 | 0.171 | 47.3 | 17.7 | 42.3 | 44.7 | 35.3 | 32.9 |
J046 | chr2 | 232567214 | 232580903 | TRUE | OK | 87.2 | 0.00677 | 0.3345 | 0.8023 | -0.177 | -0.089 | 103.5 | 89.7 | 108.8 | 73.5 | 84.2 | 63.8 |
J047 | chr2 | 232574136 | 232574262 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.6282 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J048 | chr2 | 232574136 | 232580903 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J049 | chr2 | 232574341 | 232580903 | TRUE | OK | 40.4 | 0.0221 | 0.5731 | 0.8792 | 0.162 | 0.081 | 46.3 | 27.1 | 52.4 | 41.7 | 39.2 | 35.8 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000135930.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |