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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr11 | 14277921 | 14277925 | TRUE | OK | 39.4 | 0.00954 | 0.2076 | 0.7605 | 0.313 | 0.157 | 40.4 | 26.1 | 28.2 | 45.7 | 43.1 | 53.2 |
E002 | chr11 | 14277925 | 14277963 | TRUE | OK | 91.5 | 0.0105 | 0.6511 | 0.9048 | 0.083 | 0.042 | 74.9 | 104.3 | 62.4 | 106.2 | 92.1 | 109.3 |
E003 | chr11 | 14277963 | 14278681 | TRUE | OK | 1195.0 | 0.00597 | 0.5358 | 0.8673 | 0.076 | 0.038 | 1013.6 | 1218.9 | 942.8 | 1297.6 | 1282.9 | 1414.5 |
E004 | chr11 | 14278681 | 14278938 | TRUE | OK | 1029.7 | 0.0063 | 0.2203 | 0.7648 | 0.161 | 0.080 | 874.6 | 1026.0 | 757.4 | 1111.9 | 1187.9 | 1220.1 |
E005 | chr11 | 14278938 | 14279102 | TRUE | OK | 1045.7 | 0.00896 | 0.8833 | 0.9719 | 0.011 | 0.005 | 902.2 | 1134.5 | 799.7 | 1103.0 | 1112.5 | 1222.1 |
E006 | chr11 | 14279102 | 14279109 | TRUE | OK | 656.7 | 0.00896 | 0.8669 | 0.9676 | 0.024 | 0.012 | 586.7 | 679.9 | 506.6 | 690.0 | 662.0 | 815.0 |
E007 | chr11 | 14279109 | 14279396 | TRUE | OK | 2444.5 | 0.00728 | 0.9291 | 0.9833 | 0.009 | 0.005 | 2163.3 | 2417.0 | 2057.8 | 2638.8 | 2503.0 | 2887.0 |
E008 | chr11 | 14279396 | 14279424 | TRUE | OK | 1565.6 | 0.00307 | 0.401 | 0.8244 | 0.082 | 0.041 | 1377.5 | 1445.2 | 1335.6 | 1743.3 | 1656.0 | 1836.0 |
E009 | chr11 | 14281601 | 14281689 | TRUE | OK | 1959.0 | 0.0036 | 0.1244 | 0.7197 | 0.161 | 0.080 | 1703.8 | 1721.5 | 1673.0 | 2185.1 | 2130.9 | 2339.7 |
E010 | chr11 | 14281689 | 14281720 | TRUE | OK | 1470.3 | 0.00506 | 0.0213 | 0.5016 | 0.286 | 0.143 | 1245.3 | 1174.1 | 1242.9 | 1659.0 | 1662.8 | 1838.0 |
E011 | chr11 | 14294459 | 14294470 | TRUE | OK | 11.3 | 0.0292 | 0.9863 | 0.9967 | 0.026 | 0.013 | 7.9 | 12.5 | 10.1 | 14.9 | 16.6 | 5.8 |
E012 | chr11 | 14294470 | 14294579 | TRUE | OK | 1478.0 | 0.00532 | 0.0566 | 0.6412 | 0.240 | 0.120 | 1321.3 | 1148.0 | 1266.1 | 1700.6 | 1670.7 | 1761.6 |
E013 | chr11 | 14294759 | 14294862 | TRUE | OK | 1670.5 | 0.00791 | 0.1115 | 0.7092 | 0.239 | 0.119 | 1537.2 | 1247.1 | 1450.4 | 1908.1 | 1933.1 | 1947.2 |
E014 | chr11 | 14295767 | 14295855 | TRUE | OK | 1430.6 | 0.00993 | 0.2175 | 0.7638 | 0.205 | 0.102 | 1362.7 | 1037.5 | 1254.0 | 1678.8 | 1695.1 | 1555.6 |
E015 | chr11 | 14295855 | 14295859 | TRUE | OK | 55.4 | 0.0602 | 0.9763 | 0.9942 | 0.065 | 0.033 | 66.1 | 36.5 | 44.3 | 52.6 | 98.9 | 33.8 |
E016 | chr11 | 14308206 | 14308317 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0617 | 0.107 | NA | NA | NA | 1.0 | 0.0 | 2.0 | 3.0 | 4.9 | 2.9 |
E017 | chr11 | 14337000 | 14337166 | TRUE | OK | 229.5 | 0.00772 | 1.672e-15 | 1.085e-11 | 1.368 | 0.684 | 121.3 | 92.8 | 127.9 | 318.7 | 357.4 | 358.7 |
E018 | chr11 | 14341809 | 14342094 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E019 | chr11 | 14354412 | 14354500 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E020 | chr11 | 14356685 | 14356769 | TRUE | OK | 26.2 | 0.00889 | 0.8501 | 0.9632 | 0.052 | 0.026 | 18.7 | 21.9 | 29.2 | 27.8 | 26.4 | 32.9 |
E021 | chr11 | 14358237 | 14358256 | TRUE | OK | 10.9 | 0.0141 | 0.4572 | 0.842 | 0.308 | 0.154 | 10.8 | 7.3 | 8.1 | 13.9 | 14.7 | 10.6 |
E022 | chr11 | 14358256 | 14358485 | TRUE | OK | 80.7 | 0.00324 | 0.392 | 0.8212 | 0.140 | 0.070 | 74.9 | 63.6 | 69.5 | 94.3 | 95.0 | 87.0 |
E023 | chr11 | 14358762 | 14359147 | TRUE | OK | 1390.0 | 0.038 | 0.0966 | 0.6955 | -0.495 | -0.247 | 1576.6 | 1255.4 | 1520.9 | 1611.3 | 1549.2 | 826.6 |
E024 | chr11 | 14359147 | 14359155 | TRUE | OK | 274.3 | 0.136 | 0.1189 | 0.7151 | -0.706 | -0.353 | 333.3 | 275.3 | 330.4 | 333.6 | 314.3 | 59.0 |
E025 | chr11 | 14359155 | 14359183 | TRUE | OK | 163.8 | 0.12 | 0.08927 | 0.6885 | -0.767 | -0.384 | 199.2 | 167.9 | 205.5 | 189.6 | 184.1 | 36.7 |
E026 | chr11 | 14364390 | 14364506 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.0773 | 0.1405 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 2.0 | 2.9 | 2.9 |
J027 | chr11 | 14279424 | 14281601 | TRUE | OK | 1417.8 | 0.00298 | 0.3416 | 0.8045 | 0.093 | 0.047 | 1249.3 | 1281.5 | 1219.7 | 1584.5 | 1495.4 | 1676.5 |
J028 | chr11 | 14281720 | 14294470 | TRUE | OK | 1109.3 | 0.00479 | 0.009302 | 0.3828 | 0.317 | 0.158 | 946.6 | 844.6 | 925.6 | 1260.8 | 1291.7 | 1386.4 |
J029 | chr11 | 14294579 | 14294759 | TRUE | OK | 888.9 | 0.0053 | 0.1537 | 0.7361 | 0.183 | 0.091 | 806.6 | 695.5 | 771.5 | 1006.7 | 975.4 | 1078.0 |
J030 | chr11 | 14294862 | 14295767 | TRUE | OK | 1116.0 | 0.00872 | 0.1501 | 0.7348 | 0.225 | 0.112 | 1053.1 | 802.9 | 964.9 | 1290.6 | 1307.3 | 1277.2 |
J031 | chr11 | 14295855 | 14308206 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.389 | 0.2803 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 4.9 | 1.0 |
J032 | chr11 | 14295855 | 14337000 | TRUE | OK | 162.5 | 0.00774 | 5.669e-15 | 3.338e-11 | 1.414 | 0.707 | 84.8 | 60.5 | 89.6 | 229.3 | 262.4 | 248.5 |
J033 | chr11 | 14295855 | 14341809 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J034 | chr11 | 14295855 | 14354412 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J035 | chr11 | 14295855 | 14356685 | TRUE | OK | 15.3 | 0.00907 | 0.5746 | 0.8797 | -0.190 | -0.095 | 12.8 | 15.6 | 16.1 | 14.9 | 11.8 | 20.3 |
J036 | chr11 | 14295855 | 14358237 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.8 | 0.0167 | 0.7176 | NA | NA | NA | 5.9 | 3.1 | 8.1 | 8.9 | 8.8 | 5.8 |
J037 | chr11 | 14295855 | 14358256 | TRUE | OK | 44.9 | 0.00411 | 0.5513 | 0.8722 | 0.126 | 0.063 | 40.4 | 37.5 | 38.3 | 52.6 | 59.7 | 40.6 |
J038 | chr11 | 14295855 | 14358762 | TRUE | OK | 729.0 | 0.0157 | 0.5197 | 0.8623 | -0.148 | -0.074 | 833.2 | 556.8 | 694.0 | 829.0 | 788.3 | 672.9 |
J039 | chr11 | 14295855 | 14364390 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0593 | 0.04129 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 2.0 | 2.9 | 2.9 |
J040 | chr11 | 14308317 | 14358762 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.259 | 0.1833 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J041 | chr11 | 14356769 | 14358762 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.6 | 0.0248 | 0.6979 | NA | NA | NA | 5.9 | 6.3 | 10.1 | 5.0 | 6.9 | 11.6 |
N042 | chr11 | 14295855 | 14337004 | TRUE | OK | 29.1 | 0.0179 | 0.0001806 | 0.04656 | 1.242 | 0.621 | 17.7 | 12.5 | 15.1 | 35.7 | 37.2 | 56.1 |
N043 | chr11 | 14295855 | 14337098 | TRUE | OK | 14.6 | 0.00925 | 0.0005176 | 0.09087 | 1.295 | 0.647 | 8.9 | 4.2 | 9.1 | 17.9 | 24.5 | 23.2 |
N044 | chr11 | 14295855 | 14337205 | TRUE | OK | 28.3 | 0.0156 | 0.002255 | 0.204 | 0.974 | 0.487 | 15.8 | 18.8 | 16.1 | 34.7 | 32.3 | 52.2 |
N045 | chr11 | 14331670 | 14337000 | TRUE | OK | 9.9 | 0.0123 | 0.5246 | 0.8637 | 0.270 | 0.135 | 5.9 | 9.4 | 9.1 | 7.9 | 13.7 | 13.5 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000133818.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |