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Raw Counts Table (ENSG00000125447.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Raw Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr17	75236598	75236599	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.154	0.1279	NA	NA	NA	1.0	1.0	5.0	1.0	1.0	0.0
E002	chr17	75236599	75236601	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.154	0.1279	NA	NA	NA	1.0	1.0	5.0	1.0	1.0	0.0
E003	chr17	75236601	75236620	TRUE	OK	13.4	0.0282	0.01141	0.4097	-1.114	-0.557	11.0	18.0	23.0	11.0	9.0	8.0
E004	chr17	75236620	75237283	TRUE	OK	577.3	0.0112	0.1359	0.7272	-0.269	-0.134	572.0	614.0	558.0	537.0	577.0	620.0
E005	chr17	75237283	75237426	TRUE	OK	321.7	0.00331	0.2871	0.7875	-0.119	-0.060	328.0	290.0	317.0	295.0	325.0	387.0
E006	chr17	75237426	75237521	TRUE	OK	310.7	0.00219	0.7619	0.9389	-0.028	-0.014	325.0	262.0	290.0	281.0	360.0	359.0
E007	chr17	75237521	75237525	TRUE	OK	212.0	0.00334	0.8705	0.9686	-0.019	-0.010	235.0	174.0	188.0	192.0	249.0	243.0
E008	chr17	75237525	75237532	TRUE	OK	212.0	0.00327	0.7798	0.9445	-0.034	-0.017	234.0	176.0	190.0	193.0	252.0	236.0
E009	chr17	75237532	75237644	TRUE	OK	317.9	0.00378	0.9346	0.9845	0.014	0.007	342.0	264.0	279.0	291.0	381.0	364.0
E010	chr17	75237644	75237777	TRUE	OK	288.7	0.00188	0.3385	0.8036	0.097	0.049	300.0	225.0	256.0	288.0	338.0	338.0
E011	chr17	75237777	75237796	TRUE	OK	160.2	0.0106	0.8852	0.9724	0.033	0.016	168.0	124.0	151.0	182.0	139.0	204.0
E012	chr17	75237796	75237981	TRUE	OK	154.2	0.00974	0.8396	0.9606	0.043	0.021	163.0	119.0	143.0	171.0	136.0	200.0
E013	chr17	75237981	75238090	TRUE	OK	145.7	0.003	0.9151	0.9801	-0.012	-0.006	151.0	125.0	133.0	140.0	151.0	180.0
E014	chr17	75238090	75238178	TRUE	OK	267.9	0.00316	0.9403	0.9858	-0.007	-0.003	252.0	240.0	258.0	276.0	292.0	299.0
E015	chr17	75238178	75238237	TRUE	OK	273.8	0.00305	0.5406	0.8691	-0.073	-0.037	265.0	236.0	283.0	288.0	286.0	294.0
E016	chr17	75238237	75238245	TRUE	OK	237.1	0.0054	0.6742	0.9116	-0.063	-0.032	230.0	199.0	248.0	263.0	231.0	260.0
E017	chr17	75238245	75238356	TRUE	OK	329.8	0.00422	0.6102	0.8912	-0.067	-0.033	316.0	281.0	345.0	354.0	336.0	358.0
E018	chr17	75238356	75238389	TRUE	OK	198.7	0.00385	0.428	0.8324	-0.108	-0.054	185.0	171.0	220.0	199.0	198.0	226.0
E019	chr17	75238389	75238651	TRUE	OK	54.1	0.00739	0.05397	0.6348	-0.417	-0.209	49.0	54.0	71.0	46.0	49.0	57.0
E020	chr17	75238651	75238762	TRUE	OK	266.3	0.00167	0.5524	0.8725	0.058	0.029	273.0	208.0	249.0	277.0	298.0	304.0
E021	chr17	75238913	75238964	TRUE	OK	190.9	0.00185	0.329	0.8007	0.108	0.054	191.0	141.0	182.0	198.0	225.0	217.0
E022	chr17	75238964	75238985	TRUE	OK	160.5	0.00299	0.2461	0.7744	0.151	0.076	164.0	127.0	134.0	175.0	187.0	183.0
E023	chr17	75238985	75239018	TRUE	OK	165.1	0.00301	0.4952	0.8541	0.086	0.043	175.0	129.0	144.0	180.0	184.0	186.0
E024	chr17	75239018	75239079	TRUE	OK	188.0	0.00261	0.4182	0.8295	0.097	0.048	195.0	148.0	165.0	203.0	213.0	212.0
E025	chr17	75239079	75239081	TRUE	OK	119.8	0.00245	0.5771	0.8805	0.076	0.038	123.0	95.0	108.0	120.0	142.0	136.0
E026	chr17	75239081	75239083	TRUE	OK	119.3	0.00258	0.5125	0.86	0.090	0.045	123.0	94.0	106.0	122.0	142.0	134.0
E027	chr17	75239083	75239374	TRUE	OK	10.2	0.0176	0.1405	0.7302	0.649	0.325	7.0	5.0	10.0	9.0	18.0	13.0
E028	chr17	75239374	75239538	TRUE	OK	198.0	0.00282	0.8462	0.9622	0.026	0.013	207.0	154.0	188.0	178.0	247.0	223.0
E029	chr17	75239538	75239545	TRUE	OK	118.8	0.00754	0.5143	0.8606	0.109	0.055	124.0	73.0	123.0	113.0	158.0	128.0
E030	chr17	75239545	75239551	TRUE	OK	125.5	0.0119	0.3135	0.7954	0.208	0.104	130.0	74.0	122.0	119.0	182.0	133.0
E031	chr17	75239551	75239571	TRUE	OK	139.0	0.0072	0.2344	0.7706	0.219	0.109	133.0	102.0	124.0	128.0	201.0	153.0
E032	chr17	75239571	75239788	TRUE	OK	9.7	0.0282	0.1956	0.7562	0.641	0.321	8.0	5.0	8.0	8.0	10.0	20.0
E033	chr17	75239788	75240108	TRUE	OK	297.9	0.00661	0.6206	0.8947	0.081	0.041	315.0	223.0	273.0	278.0	399.0	313.0
E034	chr17	75240108	75240341	TRUE	OK	12.7	0.0137	0.5782	0.8808	0.202	0.101	16.0	6.0	11.0	14.0	16.0	14.0
E035	chr17	75240341	75240412	TRUE	OK	180.6	0.00574	0.06516	0.6549	0.274	0.137	193.0	110.0	155.0	190.0	207.0	239.0
E036	chr17	75240412	75240437	TRUE	OK	33.4	0.0199	0.1804	0.749	0.455	0.227	23.0	27.0	28.0	27.0	39.0	58.0
E037	chr17	75240437	75240450	TRUE	OK	29.7	0.0111	0.04788	0.6197	0.576	0.288	21.0	22.0	23.0	26.0	38.0	50.0
E038	chr17	75240450	75240793	TRUE	OK	88.2	0.0113	0.2942	0.7897	0.248	0.124	79.0	60.0	86.0	71.0	104.0	134.0
E039	chr17	75240793	75240811	TRUE	OK	35.6	0.0139	0.6752	0.912	-0.097	-0.048	34.0	31.0	38.0	26.0	33.0	53.0
E040	chr17	75240811	75240948	TRUE	OK	269.8	0.00891	0.2357	0.771	0.185	0.093	301.0	173.0	235.0	315.0	296.0	313.0
E041	chr17	75240948	75241057	TRUE	OK	300.6	0.00888	0.1298	0.7232	0.239	0.120	312.0	182.0	281.0	361.0	340.0	343.0
E042	chr17	75241399	75241516	TRUE	OK	342.0	0.011	0.2794	0.7848	0.171	0.086	335.0	202.0	367.0	391.0	373.0	401.0
E043	chr17	75241516	75241614	TRUE	OK	56.2	0.00994	0.8506	0.9634	-0.062	-0.031	53.0	35.0	73.0	53.0	60.0	66.0
E044	chr17	75241614	75241668	TRUE	OK	280.7	0.01	0.1259	0.7207	0.250	0.125	288.0	155.0	278.0	301.0	318.0	360.0
E045	chr17	75241668	75241696	TRUE	OK	234.9	0.00977	0.1356	0.7269	0.256	0.128	226.0	135.0	240.0	244.0	254.0	324.0
E046	chr17	75241696	75241733	TRUE	OK	36.2	0.00659	0.251	0.7756	0.280	0.140	36.0	27.0	28.0	33.0	42.0	53.0
E047	chr17	75241733	75241864	TRUE	OK	40.4	0.00703	0.4318	0.8336	0.179	0.089	45.0	23.0	38.0	36.0	47.0	56.0
E048	chr17	75241864	75242335	TRUE	OK	81.9	0.0141	0.6133	0.8923	0.128	0.064	79.0	51.0	89.0	62.0	114.0	101.0
E049	chr17	75242335	75242368	TRUE	OK	246.8	0.0223	0.2876	0.7877	0.229	0.115	257.0	119.0	263.0	240.0	274.0	343.0
E050	chr17	75242368	75242473	TRUE	OK	291.0	0.0153	0.4386	0.8357	0.134	0.067	315.0	158.0	307.0	272.0	334.0	377.0
E051	chr17	75242830	75242883	TRUE	OK	253.9	0.00933	0.1699	0.7442	0.223	0.112	257.0	143.0	258.0	245.0	319.0	316.0
E052	chr17	75242883	75242888	TRUE	OK	200.4	0.0096	0.1203	0.7161	0.268	0.134	200.0	110.0	200.0	193.0	263.0	248.0
E053	chr17	75242888	75242911	TRUE	OK	212.9	0.00941	0.1262	0.7209	0.254	0.127	216.0	116.0	213.0	212.0	269.0	264.0
E054	chr17	75243062	75243134	TRUE	OK	243.0	0.00818	0.1167	0.7134	0.243	0.121	244.0	136.0	245.0	250.0	289.0	308.0
E055	chr17	75243134	75243166	TRUE	OK	240.2	0.0127	0.05473	0.6367	0.358	0.179	234.0	120.0	238.0	248.0	302.0	314.0
E056	chr17	75243166	75243258	TRUE	OK	18.9	0.0133	0.01615	0.4596	0.809	0.405	17.0	5.0	16.0	20.0	31.0	26.0
E057	chr17	75243446	75243516	TRUE	OK	313.8	0.0147	0.09407	0.6926	0.314	0.157	326.0	158.0	305.0	336.0	392.0	385.0
E058	chr17	75243516	75243570	TRUE	OK	284.9	0.0145	0.1502	0.7349	0.263	0.131	294.0	146.0	289.0	308.0	350.0	339.0
E059	chr17	75244401	75244490	FALSE	LOW_COUNTS_INDEP_FILTER	6.3	0.108	0.4503	NA	NA	NA	5.0	0.0	10.0	8.0	6.0	9.0
E060	chr17	75244618	75244717	TRUE	OK	286.8	0.0118	0.05652	0.6412	0.340	0.170	283.0	148.0	282.0	300.0	348.0	377.0
E061	chr17	75246508	75246584	TRUE	OK	227.5	0.02	0.2011	0.7585	0.289	0.144	245.0	114.0	217.0	218.0	251.0	335.0
E062	chr17	75246711	75246796	TRUE	OK	193.7	0.021	0.2915	0.7891	0.235	0.118	219.0	97.0	184.0	186.0	209.0	280.0
E063	chr17	75248839	75249008	TRUE	OK	28.6	0.0304	0.9751	0.9939	0.004	0.002	33.0	22.0	25.0	38.0	18.0	37.0
E064	chr17	75261547	75261585	TRUE	OK	138.2	0.0359	0.4083	0.8264	0.226	0.113	179.0	65.0	114.0	116.0	154.0	211.0
E065	chr17	75261585	75261590	TRUE	OK	40.4	0.0283	0.4076	0.8263	0.277	0.139	50.0	24.0	28.0	38.0	38.0	67.0
E066	chr17	75261590	75261593	TRUE	OK	37.6	0.0297	0.3067	0.7935	0.355	0.177	45.0	21.0	26.0	38.0	34.0	64.0
E067	chr17	75261593	75261600	TRUE	OK	30.3	0.0351	0.3145	0.796	0.362	0.181	39.0	18.0	17.0	31.0	29.0	50.0
E068	chr17	75261600	75261617	FALSE	LOW_COUNTS_INDEP_FILTER	8.3	0.0947	0.7372	NA	NA	NA	10.0	9.0	5.0	5.0	4.0	17.0
E069	chr17	75261617	75261621	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0427	0.5158	NA	NA	NA	3.0	4.0	3.0	4.0	3.0	9.0
E070	chr17	75261621	75261623	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.041	0.515	NA	NA	NA	3.0	4.0	3.0	3.0	4.0	9.0
E071	chr17	75261623	75261631	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.061	0.5156	NA	NA	NA	3.0	4.0	2.0	3.0	3.0	9.0
E072	chr17	75261631	75261804	TRUE	OK	393.5	0.00602	0.02244	0.509	-0.325	-0.162	409.0	392.0	415.0	386.0	366.0	403.0
E073	chr17	75262281	75262358	TRUE	OK	91.2	0.00463	5.029e-05	0.01896	-0.682	-0.341	123.0	97.0	97.0	61.0	83.0	88.0
E074	chr17	75262358	75262361	TRUE	OK	76.2	0.00685	0.0001888	0.04807	-0.719	-0.359	104.0	83.0	81.0	46.0	70.0	75.0
E075	chr17	75262361	75262363	TRUE	OK	77.2	0.00725	0.0001974	0.04946	-0.726	-0.363	106.0	85.0	81.0	47.0	71.0	75.0
J076	chr17	75237532	75238651	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.264	0.2848	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
J077	chr17	75237644	75238651	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.0915	0.8645	NA	NA	NA	0.0	2.0	1.0	1.0	1.0	1.0
J078	chr17	75237777	75237981	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J079	chr17	75237796	75237981	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.213	0.03578	NA	NA	NA	0.0	0.0	0.0	0.0	2.0	4.0
J080	chr17	75237796	75238651	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.336	0.05176	NA	NA	NA	1.0	0.0	4.0	0.0	0.0	0.0
J081	chr17	75238090	75238651	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.388	0.4455	NA	NA	NA	1.0	3.0	0.0	0.0	0.0	2.0
J082	chr17	75238389	75238651	TRUE	OK	145.7	0.00149	0.6681	0.9097	-0.053	-0.026	149.0	120.0	146.0	149.0	156.0	160.0
J083	chr17	75238762	75238913	TRUE	OK	154.0	0.00178	0.1794	0.7486	0.157	0.078	156.0	108.0	143.0	166.0	186.0	172.0
J084	chr17	75238762	75239374	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J085	chr17	75239018	75239374	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0887	0.2762	NA	NA	NA	0.0	1.0	1.0	0.0	3.0	3.0
J086	chr17	75239079	75239788	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.55	0.5023	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	0.0
J087	chr17	75239083	75239374	TRUE	OK	115.2	0.00193	0.6373	0.9001	0.062	0.031	121.0	93.0	101.0	118.0	134.0	129.0
J088	chr17	75239571	75239788	TRUE	OK	119.7	0.0115	0.3968	0.8228	0.201	0.101	114.0	89.0	108.0	103.0	182.0	128.0
J089	chr17	75240108	75240341	TRUE	OK	109.9	0.0066	0.6191	0.8942	0.072	0.036	132.0	70.0	98.0	110.0	121.0	134.0
J090	chr17	75240412	75240811	TRUE	OK	100.3	0.00227	0.06929	0.6615	0.258	0.129	103.0	70.0	82.0	112.0	117.0	123.0
J091	chr17	75241057	75241399	TRUE	OK	216.8	0.00597	0.2559	0.7776	0.158	0.079	218.0	138.0	218.0	253.0	240.0	244.0
J092	chr17	75241516	75241614	TRUE	OK	182.6	0.0107	0.193	0.7549	0.220	0.110	180.0	98.0	195.0	198.0	212.0	223.0
J093	chr17	75241696	75242335	TRUE	OK	174.7	0.019	0.2765	0.7836	0.237	0.118	176.0	89.0	185.0	181.0	179.0	249.0
J094	chr17	75242473	75242830	TRUE	OK	174.4	0.00858	0.503	0.8567	0.095	0.047	190.0	100.0	183.0	172.0	207.0	204.0
J095	chr17	75242911	75243062	TRUE	OK	185.8	0.00907	0.07694	0.6738	0.300	0.150	183.0	99.0	185.0	186.0	241.0	232.0
J096	chr17	75242911	75243446	FALSE	LOW_COUNTS_INDEP_FILTER	7.8	0.0185	0.2728	NA	NA	NA	6.0	9.0	11.0	8.0	4.0	9.0
J097	chr17	75243166	75243446	TRUE	OK	195.4	0.00916	0.05682	0.6415	0.318	0.159	197.0	102.0	189.0	211.0	240.0	245.0
J098	chr17	75243258	75243446	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.0145	0.199	NA	NA	NA	7.0	2.0	6.0	8.0	10.0	9.0
J099	chr17	75243570	75244401	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0554	0.3243	NA	NA	NA	1.0	0.0	2.0	3.0	2.0	2.0
J100	chr17	75243570	75244618	TRUE	OK	187.6	0.00878	0.02681	0.536	0.371	0.185	182.0	97.0	180.0	216.0	229.0	233.0
J101	chr17	75243570	75246508	TRUE	OK	24.2	0.0456	0.9974	0.9993	-0.072	-0.036	33.0	8.0	29.0	21.0	23.0	33.0
J102	chr17	75243570	75261547	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J103	chr17	75244490	75244618	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.191	0.3174	NA	NA	NA	0.0	0.0	4.0	4.0	2.0	3.0
J104	chr17	75244717	75246508	TRUE	OK	156.9	0.00889	0.03999	0.5935	0.371	0.186	150.0	86.0	147.0	157.0	180.0	231.0
J105	chr17	75246584	75246711	TRUE	OK	177.3	0.0279	0.3422	0.8047	0.240	0.120	203.0	84.0	170.0	159.0	196.0	264.0
J106	chr17	75246796	75248839	TRUE	OK	16.9	0.0476	0.5399	0.8689	0.304	0.152	16.0	9.0	17.0	27.0	10.0	23.0
J107	chr17	75246796	75261547	TRUE	OK	119.7	0.0481	0.3988	0.8236	0.261	0.131	156.0	50.0	100.0	95.0	140.0	186.0
J108	chr17	75246796	75262281	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.267	0.9228	NA	NA	NA	1.0	0.0	0.0	0.0	1.0	0.0
J109	chr17	75249008	75261547	TRUE	OK	14.9	0.0112	0.8985	0.9757	0.043	0.021	17.0	12.0	12.0	19.0	11.0	19.0
J110	chr17	75249008	75262281	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.771	0.3467	NA	NA	NA	0.0	2.0	0.0	0.0	0.0	0.0
N111	chr17	75261983	75262496	TRUE	OK	1333.8	0.02	0.3728	0.8143	-0.201	-0.100	1321.0	1331.0	1244.0	1383.0	1299.0	1463.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000125447.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE