<<

< Prev Gene

TOP

Next Gene >

>>

Raw Counts Table (ENSG00000125124.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Raw Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr16	56466835	56466974	TRUE	OK	456.3	0.00726	7.22e-05	0.02478	-0.624	-0.312	557.0	389.0	590.0	443.0	373.0	397.0
E002	chr16	56470402	56470614	TRUE	OK	791.1	0.00134	4.549e-15	2.72e-11	-0.610	-0.305	901.0	774.0	923.0	739.0	716.0	710.0
E003	chr16	56484344	56484384	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.131	0.4715	NA	NA	NA	2.0	7.0	1.0	8.0	3.0	6.0
E004	chr16	56484384	56484387	TRUE	OK	11.8	0.097	0.2734	0.783	0.672	0.336	6.0	15.0	4.0	13.0	10.0	23.0
E005	chr16	56484387	56484760	TRUE	OK	234.6	0.0249	0.7867	0.9461	-0.095	-0.047	189.0	287.0	201.0	243.0	230.0	262.0
E006	chr16	56484760	56484867	TRUE	OK	275.1	0.0146	0.5399	0.8689	0.130	0.065	224.0	285.0	228.0	295.0	290.0	337.0
E007	chr16	56485589	56485606	TRUE	OK	183.2	0.00378	0.0472	0.6173	0.274	0.137	152.0	159.0	155.0	203.0	206.0	232.0
E008	chr16	56485606	56485738	TRUE	OK	274.0	0.00342	0.01368	0.4345	0.307	0.153	229.0	232.0	230.0	310.0	310.0	345.0
E009	chr16	56496966	56497079	TRUE	OK	197.9	0.00238	0.003467	0.25	0.350	0.175	173.0	154.0	163.0	219.0	231.0	257.0
E010	chr16	56497079	56497742	FALSE	LOW_COUNTS_INDEP_FILTER	8.0	0.052	0.2469	NA	NA	NA	2.0	9.0	6.0	7.0	13.0	11.0
E011	chr16	56497742	56497775	TRUE	OK	142.2	0.00939	0.4403	0.8362	0.149	0.075	122.0	142.0	114.0	159.0	151.0	170.0
E012	chr16	56497775	56497802	TRUE	OK	133.6	0.0121	0.2028	0.7589	0.267	0.133	119.0	129.0	92.0	151.0	153.0	163.0
E013	chr16	56497802	56497880	TRUE	OK	162.9	0.0109	0.2247	0.7667	0.242	0.121	153.0	150.0	116.0	193.0	168.0	204.0
E014	chr16	56498436	56498489	TRUE	OK	170.7	0.00624	0.1476	0.7338	0.237	0.119	150.0	156.0	134.0	201.0	183.0	207.0
E015	chr16	56498489	56498568	TRUE	OK	190.1	0.00552	0.038	0.5862	0.321	0.160	161.0	163.0	151.0	243.0	206.0	224.0
E016	chr16	56498568	56498693	TRUE	OK	22.8	0.00982	0.1905	0.754	0.396	0.198	19.0	18.0	18.0	22.0	35.0	26.0
E017	chr16	56498693	56498696	TRUE	OK	10.4	0.0146	0.1008	0.6987	0.700	0.350	7.0	7.0	8.0	11.0	16.0	14.0
E018	chr16	56498696	56499700	TRUE	OK	41.7	0.0136	0.00239	0.2102	0.843	0.422	29.0	28.0	26.0	40.0	62.0	68.0
E019	chr16	56499700	56499777	TRUE	OK	13.2	0.0131	0.3142	0.7958	0.385	0.193	9.0	13.0	10.0	13.0	17.0	18.0
E020	chr16	56499777	56499785	TRUE	OK	148.5	0.00464	0.02383	0.5182	0.346	0.173	125.0	124.0	118.0	193.0	162.0	175.0
E021	chr16	56499785	56499831	TRUE	OK	171.2	0.00384	0.005113	0.299	0.394	0.197	141.0	138.0	137.0	220.0	186.0	213.0
E022	chr16	56499831	56499907	TRUE	OK	197.6	0.00768	0.02387	0.5184	0.393	0.196	172.0	161.0	148.0	243.0	202.0	269.0
E023	chr16	56499907	56499923	FALSE	LOW_COUNTS_INDEP_FILTER	8.4	0.021	0.0149	NA	NA	NA	3.0	3.0	8.0	11.0	15.0	11.0
E024	chr16	56499923	56499978	FALSE	LOW_COUNTS_INDEP_FILTER	7.2	0.0209	0.009087	NA	NA	NA	2.0	3.0	6.0	10.0	12.0	11.0
E025	chr16	56499978	56500853	TRUE	OK	25.1	0.0084	5.045e-06	0.003174	1.357	0.679	14.0	9.0	16.0	31.0	42.0	41.0
E026	chr16	56500853	56500881	TRUE	OK	160.5	0.00698	0.06532	0.6552	0.320	0.160	142.0	133.0	126.0	192.0	160.0	217.0
E027	chr16	56500881	56500919	TRUE	OK	168.4	0.00358	0.07275	0.667	0.247	0.124	161.0	131.0	141.0	199.0	171.0	215.0
E028	chr16	56500919	56500945	TRUE	OK	160.1	0.00655	0.2522	0.776	0.194	0.097	161.0	127.0	132.0	186.0	153.0	209.0
E029	chr16	56500945	56500946	TRUE	OK	147.5	0.00502	0.2197	0.7648	0.187	0.094	156.0	108.0	124.0	170.0	148.0	186.0
E030	chr16	56500946	56500977	TRUE	OK	175.0	0.00462	0.1112	0.7091	0.228	0.114	178.0	119.0	157.0	209.0	177.0	219.0
E031	chr16	56500977	56501025	TRUE	OK	180.2	0.00549	0.1794	0.7486	0.197	0.098	197.0	123.0	153.0	208.0	192.0	217.0
E032	chr16	56501025	56501176	TRUE	OK	15.7	0.0245	0.644	0.9023	0.197	0.099	17.0	14.0	10.0	14.0	14.0	26.0
E033	chr16	56501176	56501352	TRUE	OK	12.4	0.0419	0.1576	0.738	0.713	0.356	7.0	12.0	7.0	9.0	21.0	19.0
E034	chr16	56501352	56501402	TRUE	OK	189.7	0.00327	0.02834	0.5447	0.279	0.140	194.0	125.0	164.0	214.0	218.0	233.0
E035	chr16	56501402	56501497	TRUE	OK	255.0	0.00226	0.07645	0.6729	0.193	0.096	255.0	183.0	233.0	270.0	298.0	303.0
E036	chr16	56501497	56501594	TRUE	OK	20.1	0.0494	0.07773	0.6747	0.842	0.421	16.0	7.0	17.0	14.0	37.0	31.0
E037	chr16	56501594	56501646	TRUE	OK	13.6	0.0247	0.006353	0.3265	1.188	0.594	10.0	5.0	8.0	12.0	22.0	26.0
E038	chr16	56501646	56501762	TRUE	OK	24.8	0.0277	0.004897	0.2934	1.089	0.544	16.0	11.0	17.0	22.0	35.0	50.0
E039	chr16	56501762	56501806	TRUE	OK	17.6	0.0437	0.1432	0.7316	0.721	0.360	12.0	10.0	15.0	12.0	22.0	36.0
E040	chr16	56501806	56502221	TRUE	OK	46.3	0.009	0.0004585	0.08395	0.850	0.425	35.0	28.0	29.0	48.0	66.0	75.0
E041	chr16	56502221	56502316	TRUE	OK	21.0	0.00883	0.1185	0.7148	0.474	0.237	19.0	13.0	17.0	24.0	31.0	23.0
E042	chr16	56502316	56502456	TRUE	OK	318.3	0.00288	0.02746	0.5399	0.245	0.123	284.0	223.0	316.0	381.0	365.0	355.0
E043	chr16	56502456	56502672	TRUE	OK	32.2	0.00745	0.1944	0.7559	0.327	0.164	27.0	20.0	33.0	32.0	45.0	38.0
E044	chr16	56502672	56502701	TRUE	OK	216.7	0.00325	0.01117	0.4076	0.314	0.157	196.0	138.0	211.0	263.0	249.0	254.0
E045	chr16	56502701	56502808	TRUE	OK	285.0	0.00249	0.001677	0.1744	0.343	0.172	260.0	184.0	267.0	325.0	333.0	356.0
E046	chr16	56505949	56505977	TRUE	OK	196.0	0.00273	0.0007432	0.1116	0.414	0.207	182.0	130.0	162.0	216.0	241.0	256.0
E047	chr16	56505977	56506036	TRUE	OK	230.1	0.00276	0.0007007	0.108	0.402	0.201	217.0	152.0	191.0	268.0	262.0	303.0
E048	chr16	56506119	56506163	TRUE	OK	264.9	0.00152	2.229e-05	0.01036	0.424	0.212	227.0	184.0	229.0	307.0	318.0	338.0
E049	chr16	56506163	56506224	TRUE	OK	284.1	0.00168	7.336e-06	0.004273	0.449	0.224	253.0	189.0	239.0	330.0	345.0	364.0
E050	chr16	56509356	56509956	TRUE	OK	25.9	0.0101	0.008102	0.3626	0.777	0.389	13.0	18.0	22.0	28.0	35.0	41.0
E051	chr16	56509956	56509967	TRUE	OK	277.5	0.00163	5.495e-06	0.003408	0.456	0.228	241.0	191.0	231.0	319.0	339.0	359.0
E052	chr16	56509967	56509981	TRUE	OK	293.4	0.00198	1.43e-05	0.007315	0.451	0.225	251.0	200.0	252.0	329.0	358.0	386.0
E053	chr16	56509981	56509989	TRUE	OK	279.2	0.0024	6.495e-05	0.02308	0.441	0.220	239.0	189.0	243.0	306.0	346.0	367.0
E054	chr16	56509989	56510003	TRUE	OK	276.0	0.00246	3.071e-05	0.01297	0.465	0.233	238.0	188.0	231.0	303.0	344.0	367.0
E055	chr16	56510003	56510034	TRUE	OK	277.6	0.00255	0.0002473	0.05733	0.413	0.206	243.0	196.0	235.0	299.0	342.0	365.0
E056	chr16	56510858	56510921	TRUE	OK	297.0	0.00224	0.0003933	0.07675	0.379	0.190	275.0	215.0	241.0	340.0	340.0	386.0
E057	chr16	56511132	56511158	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.0967	0.1431	NA	NA	NA	6.0	2.0	3.0	4.0	7.0	17.0
E058	chr16	56511158	56511278	TRUE	OK	278.3	0.00904	0.02169	0.5044	0.384	0.192	289.0	163.0	233.0	316.0	321.0	364.0
E059	chr16	56511278	56511284	TRUE	OK	140.9	0.0154	0.1443	0.7323	0.303	0.151	161.0	75.0	120.0	159.0	158.0	181.0
E060	chr16	56514452	56514680	TRUE	OK	282.8	0.0117	0.07353	0.6683	0.324	0.162	315.0	172.0	225.0	329.0	316.0	356.0
E061	chr16	56516062	56516131	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.249	0.5377	NA	NA	NA	1.0	0.0	1.0	0.0	1.0	0.0
E062	chr16	56519513	56519621	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.865	0.658	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
E063	chr16	56519745	56519956	TRUE	OK	176.4	0.0157	0.1351	0.7264	0.304	0.152	198.0	93.0	155.0	192.0	214.0	217.0
E064	chr16	56519956	56519996	TRUE	OK	86.8	0.0142	0.1261	0.7209	0.334	0.167	95.0	43.0	78.0	95.0	101.0	114.0
E065	chr16	56519996	56520024	TRUE	OK	47.1	0.01	0.1829	0.7502	0.308	0.154	49.0	24.0	45.0	54.0	63.0	50.0
E066	chr16	56520024	56520041	TRUE	OK	12.5	0.0143	0.003268	0.2439	1.194	0.597	11.0	4.0	6.0	16.0	21.0	18.0
E067	chr16	56520041	56520056	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.102	0.06854	NA	NA	NA	7.0	1.0	2.0	5.0	15.0	9.0
E068	chr16	56520056	56520087	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.0548	0.008863	NA	NA	NA	1.0	0.0	1.0	3.0	5.0	6.0
J069	chr16	56466974	56484760	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.723	0.339	NA	NA	NA	0.0	2.0	0.0	0.0	0.0	0.0
J070	chr16	56470614	56484760	FALSE	LOW_COUNTS_INDEP_FILTER	3.3	0.2	0.6968	NA	NA	NA	0.0	5.0	3.0	6.0	1.0	5.0
J071	chr16	56484867	56485589	TRUE	OK	175.6	0.00474	0.05307	0.6331	0.289	0.144	148.0	155.0	141.0	194.0	196.0	227.0
J072	chr16	56485738	56496966	TRUE	OK	140.0	0.00165	0.001142	0.1421	0.401	0.200	111.0	106.0	122.0	161.0	167.0	180.0
J073	chr16	56497079	56497742	TRUE	OK	112.8	0.00591	0.3712	0.8139	0.158	0.079	99.0	107.0	93.0	125.0	115.0	142.0
J074	chr16	56497079	56498436	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J075	chr16	56497880	56498436	TRUE	OK	118.4	0.0154	0.4068	0.826	0.199	0.100	109.0	116.0	84.0	139.0	113.0	154.0
J076	chr16	56498568	56499777	TRUE	OK	126.3	0.00483	0.04029	0.5946	0.329	0.165	105.0	101.0	108.0	172.0	135.0	142.0
J077	chr16	56498693	56499777	FALSE	LOW_COUNTS_INDEP_FILTER	4.2	0.0272	0.0192	NA	NA	NA	7.0	7.0	4.0	1.0	4.0	2.0
J078	chr16	56498696	56499777	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.131	0.8436	NA	NA	NA	0.0	3.0	3.0	2.0	5.0	1.0
J079	chr16	56499907	56500853	TRUE	OK	135.1	0.00874	0.1233	0.719	0.300	0.150	122.0	112.0	106.0	159.0	129.0	189.0
J080	chr16	56500977	56501352	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.66	0.6111	NA	NA	NA	1.0	0.0	5.0	0.0	0.0	4.0
J081	chr16	56501025	56501352	TRUE	OK	132.4	0.00399	0.2012	0.7585	0.183	0.091	144.0	88.0	117.0	157.0	142.0	153.0
J082	chr16	56501497	56502316	TRUE	OK	173.1	0.00129	0.1968	0.7564	0.141	0.070	162.0	134.0	167.0	188.0	200.0	195.0
J083	chr16	56501762	56502316	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J084	chr16	56502456	56502672	TRUE	OK	180.6	0.00408	0.06992	0.6625	0.247	0.123	166.0	118.0	181.0	227.0	195.0	205.0
J085	chr16	56502456	56502701	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J086	chr16	56502808	56505949	TRUE	OK	160.2	0.00264	0.001374	0.1572	0.412	0.206	150.0	110.0	127.0	172.0	200.0	211.0
J087	chr16	56506036	56506119	TRUE	OK	196.1	0.00132	0.0001171	0.03466	0.409	0.204	175.0	134.0	166.0	235.0	225.0	252.0
J088	chr16	56506224	56509356	FALSE	LOW_COUNTS_INDEP_FILTER	6.6	0.0277	0.1251	NA	NA	NA	4.0	3.0	6.0	7.0	6.0	14.0
J089	chr16	56506224	56509956	TRUE	OK	236.9	0.00122	4.546e-06	0.002938	0.454	0.227	203.0	162.0	200.0	279.0	278.0	312.0
J090	chr16	56510034	56510858	TRUE	OK	236.2	0.0018	0.0008334	0.1194	0.359	0.179	209.0	182.0	193.0	258.0	280.0	307.0
J091	chr16	56510921	56511132	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.173	0.67	NA	NA	NA	1.0	0.0	0.0	0.0	1.0	1.0
J092	chr16	56510921	56511158	TRUE	OK	186.7	0.00534	0.01812	0.4766	0.351	0.175	190.0	119.0	154.0	208.0	210.0	250.0
J093	chr16	56511284	56514452	TRUE	OK	134.0	0.0153	0.1841	0.7504	0.275	0.138	155.0	73.0	114.0	151.0	146.0	173.0
J094	chr16	56514680	56516062	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.265	0.9296	NA	NA	NA	0.0	0.0	1.0	0.0	1.0	0.0
J095	chr16	56514680	56519513	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J096	chr16	56514680	56519745	TRUE	OK	120.8	0.018	0.1811	0.7494	0.301	0.151	145.0	71.0	89.0	129.0	137.0	161.0
J097	chr16	56514680	56519956	FALSE	LOW_COUNTS_INDEP_FILTER	4.1	0.127	0.7276	NA	NA	NA	8.0	0.0	3.0	3.0	5.0	6.0
N098	chr16	56466268	56466875	TRUE	OK	420.8	0.00707	3.731e-05	0.01508	-0.637	-0.318	530.0	372.0	522.0	403.0	314.0	394.0
N099	chr16	56466967	56467164	TRUE	OK	472.3	0.00917	0.001293	0.1522	-0.563	-0.281	576.0	387.0	601.0	450.0	390.0	443.0
N100	chr16	56467293	56467904	TRUE	OK	460.7	0.00522	0.0001004	0.03118	-0.530	-0.265	559.0	395.0	558.0	462.0	388.0	414.0
N101	chr16	56468018	56470002	TRUE	OK	507.6	0.00252	7.603e-11	2.171e-07	-0.661	-0.330	596.0	495.0	626.0	481.0	438.0	419.0
N102	chr16	56470082	56470486	TRUE	OK	465.1	0.00101	1.669e-14	9.126e-11	-0.611	-0.305	539.0	451.0	567.0	425.0	410.0	408.0
N103	chr16	56470791	56474827	TRUE	OK	642.2	0.00486	3.175e-10	7.891e-07	-0.798	-0.399	814.0	692.0	719.0	595.0	514.0	528.0
N104	chr16	56474950	56475506	TRUE	OK	621.2	0.00552	1.809e-08	2.703e-05	-0.752	-0.376	748.0	692.0	691.0	578.0	495.0	531.0
N105	chr16	56475565	56476043	TRUE	OK	626.5	0.00255	1.364e-11	4.934e-08	-0.667	-0.333	722.0	672.0	711.0	573.0	530.0	561.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000125124.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE