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Normalized Counts Table (ENSG00000116688.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr1	11980180	11980298	TRUE	OK	62.3	0.00426	0.6322	0.8984	-0.088	-0.044	62.1	63.6	71.5	67.5	53.9	55.1
E002	chr1	11980298	11980311	TRUE	OK	70.2	0.00335	0.6111	0.8915	-0.088	-0.044	75.9	66.7	79.6	72.5	61.7	64.8
E003	chr1	11980311	11980369	TRUE	OK	121.3	0.00467	0.7465	0.9344	-0.055	-0.027	118.3	110.5	151.1	121.1	112.6	114.1
E004	chr1	11980369	11980434	TRUE	OK	163.3	0.00782	0.9357	0.9848	0.003	0.001	156.8	137.6	207.5	162.8	150.8	164.4
E005	chr1	11980434	11980484	TRUE	OK	545.7	0.00761	0.1694	0.7441	0.195	0.097	604.4	396.2	571.1	595.7	525.9	581.1
E006	chr1	11981809	11981853	TRUE	OK	21.0	0.0263	0.2406	0.7726	0.419	0.210	20.7	9.4	25.2	24.8	17.6	28.0
E007	chr1	11981969	11981991	TRUE	OK	702.5	0.0111	0.273	0.783	0.171	0.086	830.2	489.0	722.2	777.4	691.4	704.8
E008	chr1	11981991	11982114	TRUE	OK	1108.6	0.0104	0.2362	0.7712	0.179	0.090	1262.1	778.9	1177.4	1197.3	1125.2	1110.9
E009	chr1	11982522	11982590	TRUE	OK	47.0	0.0245	0.04086	0.5967	0.599	0.300	53.2	19.8	42.3	59.6	49.0	58.0
E010	chr1	11989164	11989234	TRUE	OK	1211.7	0.0104	0.1592	0.7385	0.218	0.109	1365.6	843.6	1265.1	1330.3	1230.0	1235.6
E011	chr1	11989234	11989343	TRUE	OK	1208.4	0.00992	0.3253	0.7996	0.142	0.071	1378.4	868.6	1305.4	1293.6	1190.8	1213.4
E012	chr1	11992278	11992463	TRUE	OK	42.4	0.00447	0.0006629	0.1046	0.728	0.364	35.5	29.2	34.2	50.6	51.9	53.2
E013	chr1	11992554	11992640	TRUE	OK	1057.5	0.00792	0.3139	0.7956	0.135	0.068	1189.1	786.2	1139.2	1141.7	1026.3	1062.6
E014	chr1	11992640	11992673	TRUE	OK	863.6	0.0066	0.5701	0.8782	0.065	0.033	996.9	673.6	930.7	908.4	804.0	868.2
E015	chr1	11992673	11992690	TRUE	OK	829.1	0.00751	0.6127	0.8921	0.063	0.031	957.4	645.4	896.4	898.5	749.1	827.6
E016	chr1	11996155	11996318	TRUE	OK	1350.4	0.00583	0.5623	0.8757	0.061	0.031	1542.1	1068.8	1464.5	1404.8	1315.2	1307.2
E017	chr1	11997296	11997421	TRUE	OK	1187.8	0.0035	0.7973	0.949	0.017	0.009	1345.9	994.8	1293.3	1191.3	1157.5	1143.8
E018	chr1	11998769	11998878	TRUE	OK	1127.2	0.00441	0.54	0.8689	0.059	0.030	1292.7	915.5	1194.6	1143.7	1136.0	1080.9
E019	chr1	11998987	11999095	TRUE	OK	1103.8	0.00441	0.5405	0.8691	0.059	0.030	1277.9	898.8	1155.3	1139.7	1065.5	1085.8
E020	chr1	12001400	12001554	TRUE	OK	1300.1	0.00663	0.4025	0.8249	0.103	0.051	1490.8	1012.5	1368.8	1403.8	1229.0	1295.6
E021	chr1	12001768	12001836	TRUE	OK	1150.5	0.00818	0.4116	0.8276	0.108	0.054	1334.1	867.5	1217.7	1209.2	1086.0	1188.2
E022	chr1	12001981	12002103	TRUE	OK	1336.2	0.00866	0.1738	0.7457	0.196	0.098	1483.0	969.7	1409.1	1459.4	1307.3	1388.4
E023	chr1	12003991	12004118	TRUE	OK	1487.0	0.00452	0.04878	0.622	0.219	0.109	1530.3	1159.5	1578.3	1541.8	1569.8	1542.1
E024	chr1	12004508	12004613	TRUE	OK	1280.6	0.00343	0.06068	0.649	0.185	0.093	1363.6	1025.0	1324.5	1306.5	1341.6	1322.6
E025	chr1	12004824	12004927	TRUE	OK	1183.2	0.00416	0.1111	0.709	0.170	0.085	1293.6	937.4	1215.7	1192.3	1243.7	1216.3
E026	chr1	12005710	12005931	TRUE	OK	1496.9	0.00287	0.3692	0.8133	0.078	0.039	1654.5	1262.7	1578.3	1480.2	1490.5	1515.0
E027	chr1	12006537	12006693	TRUE	OK	1132.7	0.0015	0.8278	0.9572	-0.020	-0.010	1266.0	1021.9	1217.7	1128.8	1057.6	1104.1
E028	chr1	12007052	12007249	TRUE	OK	1101.1	0.00178	0.4743	0.8476	-0.060	-0.030	1272.0	1011.4	1167.4	1115.9	998.9	1041.3
E029	chr1	12009591	12009726	TRUE	OK	1124.5	0.00326	0.5812	0.8816	0.048	0.024	1304.5	964.5	1138.2	1084.1	1135.0	1120.6
E030	chr1	12011495	12013508	TRUE	OK	7651.7	0.012	0.2198	0.7648	-0.214	-0.107	8196.7	8621.2	7601.5	7306.9	7091.9	7091.7
E031	chr1	12013508	12013514	FALSE	LOW_COUNTS_INDEP_FILTER	5.3	0.0338	0.8327	NA	NA	NA	9.9	3.1	4.0	5.0	4.9	4.8
J032	chr1	11980484	11981809	TRUE	OK	9.9	0.0213	0.9343	0.9845	0.030	0.015	11.8	5.2	13.1	12.9	5.9	10.6
J033	chr1	11980484	11981969	TRUE	OK	407.3	0.00461	0.04267	0.6027	0.246	0.123	443.7	300.3	406.9	434.8	417.2	440.9
J034	chr1	11980484	11989164	TRUE	OK	52.8	0.0169	0.9485	0.9879	0.005	0.002	60.1	35.5	66.5	63.5	41.1	50.3
J035	chr1	11981853	11981969	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.115	0.7494	NA	NA	NA	8.9	1.0	6.0	7.9	2.0	7.7
J036	chr1	11982114	11982522	TRUE	OK	36.6	0.0444	0.1605	0.7393	0.482	0.241	45.4	12.5	36.3	41.7	39.2	44.5
J037	chr1	11982114	11989164	TRUE	OK	875.4	0.00941	0.2007	0.7583	0.190	0.095	992.9	618.3	918.6	954.1	904.9	863.4
J038	chr1	11982590	11989164	TRUE	OK	29.1	0.0199	0.009386	0.3838	0.817	0.409	29.6	10.4	25.2	34.7	33.3	41.6
J039	chr1	11989343	11992278	TRUE	OK	19.2	0.0218	0.6362	0.8999	0.177	0.089	15.8	15.6	24.2	13.9	27.4	18.4
J040	chr1	11989343	11992554	TRUE	OK	704.2	0.00979	0.3843	0.8185	0.124	0.062	808.5	502.6	768.5	746.6	687.5	711.6
J041	chr1	11992463	11992554	TRUE	OK	18.9	0.019	8.408e-06	0.004781	1.665	0.833	13.8	11.5	3.0	30.8	24.5	30.0
J042	chr1	11992690	11996155	TRUE	OK	739.4	0.00558	0.5456	0.8704	0.069	0.035	847.0	588.1	788.7	806.1	683.5	723.2
J043	chr1	11996318	11997296	TRUE	OK	726.0	0.00361	0.5208	0.8626	0.061	0.030	814.4	592.3	782.6	730.7	697.2	738.7
J044	chr1	11997421	11998769	TRUE	OK	723.0	0.00427	0.849	0.963	0.012	0.006	836.1	596.4	782.6	693.0	746.2	683.6
J045	chr1	11998878	11998987	TRUE	OK	737.0	0.00377	0.3748	0.8149	0.089	0.044	844.0	596.4	761.5	771.4	706.1	742.5
J046	chr1	11999095	12001400	TRUE	OK	665.1	0.00319	0.2529	0.7763	0.111	0.055	759.2	539.1	673.8	701.9	660.0	656.5
J047	chr1	12001554	12001768	TRUE	OK	766.6	0.00964	0.5693	0.8779	0.081	0.040	911.1	582.9	802.8	846.8	674.7	781.2
J048	chr1	12001836	12001981	TRUE	OK	855.3	0.0091	0.3336	0.802	0.137	0.068	990.0	622.5	903.5	914.4	815.7	885.6
J049	chr1	12002103	12003991	TRUE	OK	876.1	0.00617	0.04992	0.6253	0.253	0.127	933.8	640.2	903.5	917.3	905.8	956.2
J050	chr1	12004118	12004508	TRUE	OK	897.3	0.00279	0.02757	0.5404	0.208	0.104	880.5	735.1	961.9	932.2	958.7	915.6
J051	chr1	12004613	12004824	TRUE	OK	782.3	0.00426	0.1457	0.733	0.160	0.080	864.7	617.3	800.7	769.4	818.7	822.8
J052	chr1	12004927	12005710	TRUE	OK	706.4	0.00363	0.1758	0.7468	0.139	0.070	785.8	563.1	726.2	715.8	704.1	743.5
J053	chr1	12005931	12006537	TRUE	OK	755.9	0.00214	0.5793	0.8811	0.044	0.022	826.3	653.8	811.8	735.7	727.6	780.2
J054	chr1	12006693	12007052	TRUE	OK	521.8	0.00298	0.066	0.656	-0.191	-0.096	609.4	517.2	578.1	528.2	414.2	483.4
J055	chr1	12007249	12009591	TRUE	OK	562.4	0.00364	0.2983	0.7913	0.107	0.053	651.8	458.8	559.0	555.0	569.9	580.1
J056	chr1	12009726	12011495	TRUE	OK	719.0	0.00251	0.9466	0.9873	-0.012	-0.006	847.0	649.6	723.2	671.1	733.5	689.4
N057	chr1	11980484	11981973	TRUE	OK	48.9	0.0061	0.4532	0.8404	0.157	0.078	58.2	39.6	44.3	61.6	42.1	47.4
N058	chr1	12002103	12003757	TRUE	OK	17.7	0.0298	0.979	0.9949	0.005	0.002	19.7	10.4	24.2	24.8	14.7	12.6

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000116688.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE