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Normalized Counts Table (ENSG00000116584.18)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr1	155946850	155946853	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0332	0.4101	NA	NA	NA	3.0	8.3	5.0	6.9	4.9	10.6
E002	chr1	155946853	155946854	TRUE	OK	9.6	0.0173	0.8923	0.9742	-0.063	-0.032	7.9	12.5	9.1	7.9	8.8	11.6
E003	chr1	155946854	155946855	TRUE	OK	14.0	0.0127	0.3532	0.8084	-0.339	-0.169	13.8	19.8	13.1	15.9	10.8	10.6
E004	chr1	155946855	155947080	TRUE	OK	418.2	0.00652	0.03625	0.5798	-0.300	-0.150	412.2	509.9	448.2	445.8	296.7	396.4
E005	chr1	155947080	155947366	TRUE	OK	932.4	0.0083	0.1143	0.7118	-0.250	-0.125	898.3	1148.0	945.8	963.0	729.6	909.8
E006	chr1	155947366	155947941	TRUE	OK	1282.5	0.00598	0.1193	0.7155	-0.207	-0.103	1181.2	1504.6	1365.8	1408.8	1022.4	1212.4
E007	chr1	155947941	155948015	TRUE	OK	367.3	0.00132	0.6038	0.8891	0.045	0.022	338.2	369.1	372.7	415.0	336.9	372.2
E008	chr1	155950268	155950298	TRUE	OK	123.0	0.00494	0.6065	0.8901	0.072	0.036	112.4	106.4	139.0	124.1	129.3	126.7
E009	chr1	155950298	155950482	TRUE	OK	568.7	0.00198	0.1296	0.7231	-0.134	-0.067	551.2	624.6	594.3	635.4	489.6	517.3
E010	chr1	155950828	155950872	TRUE	OK	481.0	0.00453	0.2799	0.785	-0.126	-0.063	464.4	526.6	502.6	571.8	422.1	398.3
E011	chr1	155950872	155950873	TRUE	OK	407.9	0.00527	0.2489	0.7752	-0.142	-0.071	397.4	434.8	441.2	496.4	351.6	325.8
E012	chr1	155950873	155951272	TRUE	OK	1129.5	0.00151	0.05782	0.6434	-0.140	-0.070	1075.7	1193.9	1237.9	1278.7	973.4	1017.1
E013	chr1	155951482	155951533	TRUE	OK	433.3	0.00135	0.6695	0.9102	0.035	0.017	418.1	409.8	450.2	478.5	397.6	445.7
E014	chr1	155951740	155951748	TRUE	OK	406.7	0.00134	0.8943	0.9747	-0.013	-0.006	392.4	382.7	443.2	451.7	359.4	410.9
E015	chr1	155951748	155951776	TRUE	OK	443.1	0.00137	0.7035	0.9208	0.032	0.016	427.9	416.0	464.3	494.4	397.6	458.3
E016	chr1	155951918	155951986	TRUE	OK	470.9	0.00166	0.9337	0.9844	-0.005	-0.003	473.3	442.1	491.5	541.1	407.4	469.9
E017	chr1	155952115	155952235	TRUE	OK	639.8	0.00122	0.3853	0.8188	-0.066	-0.033	631.0	622.5	695.0	701.9	548.4	640.0
E018	chr1	155952627	155952721	TRUE	OK	597.6	0.00171	0.8186	0.9549	-0.018	-0.009	571.9	616.2	605.3	667.2	516.1	609.1
E019	chr1	155952721	155952731	TRUE	OK	485.7	0.00159	0.7233	0.9271	-0.028	-0.014	455.5	497.4	509.7	551.0	408.4	492.1
E020	chr1	155952731	155952802	TRUE	OK	604.4	0.00167	0.6991	0.9196	-0.031	-0.015	568.9	626.7	625.5	678.1	513.1	613.9
E021	chr1	155952802	155952828	TRUE	OK	515.0	0.00189	0.8376	0.96	-0.018	-0.009	485.1	532.8	527.8	563.9	445.6	534.7
E022	chr1	155954901	155954969	TRUE	OK	569.9	0.00257	0.8721	0.9689	0.019	0.010	569.9	562.0	558.0	643.3	492.6	593.6
E023	chr1	155957712	155957882	TRUE	OK	697.5	0.00165	0.9687	0.9926	-0.003	-0.002	703.0	644.4	735.3	786.3	621.8	694.2
E024	chr1	155958319	155958396	TRUE	OK	474.1	0.00312	0.9114	0.979	-0.009	-0.004	486.1	421.3	510.7	560.9	403.5	462.1
E025	chr1	155961660	155961909	TRUE	OK	831.5	0.00216	0.8577	0.9652	0.015	0.007	841.1	752.8	875.3	934.2	753.1	832.4
E026	chr1	155961909	155961938	TRUE	OK	68.8	0.00757	2.174e-07	0.000237	-1.060	-0.530	89.7	90.7	96.7	64.5	29.4	41.6
E027	chr1	155961938	155961957	TRUE	OK	54.2	0.0203	0.0002327	0.05477	-1.033	-0.517	75.9	62.6	78.6	54.6	19.6	33.8
E028	chr1	155961957	155962104	TRUE	OK	36.9	0.0322	0.07392	0.6686	-0.611	-0.305	51.3	30.2	51.4	46.7	20.6	21.3
E029	chr1	155962104	155962222	TRUE	OK	435.3	0.00184	0.01243	0.42	0.226	0.113	391.4	365.0	446.2	508.3	432.8	467.9
E030	chr1	155962222	155962592	TRUE	OK	14.1	0.0137	0.631	0.8981	0.178	0.089	15.8	9.4	14.1	18.9	15.7	10.6
E031	chr1	155962592	155962623	TRUE	OK	349.4	0.0018	0.01704	0.4685	0.230	0.115	323.4	296.1	343.5	437.8	342.7	352.9
E032	chr1	155962623	155962718	TRUE	OK	410.2	0.00287	0.02001	0.4921	0.253	0.127	383.6	331.6	406.9	526.2	381.9	431.2
E033	chr1	155962932	155962972	TRUE	OK	309.7	0.00297	0.0221	0.5071	0.265	0.132	286.9	250.3	305.2	398.1	280.1	337.4
E034	chr1	155962972	155963126	TRUE	OK	445.3	0.00755	0.01953	0.4879	0.359	0.180	409.2	313.9	450.2	574.8	417.2	506.6
E035	chr1	155963126	155963139	TRUE	OK	300.9	0.00588	0.009799	0.389	0.374	0.187	264.3	215.8	306.2	388.2	280.1	351.0
E036	chr1	155963139	155963183	TRUE	OK	353.8	0.00548	0.02656	0.5344	0.303	0.152	328.3	259.6	361.6	439.8	336.9	396.4
E037	chr1	155964987	155965128	TRUE	OK	446.3	0.00485	0.02757	0.5404	0.282	0.141	428.9	344.1	436.1	537.1	427.0	504.7
E038	chr1	155965128	155965131	TRUE	OK	146.7	0.00299	0.06223	0.6507	0.251	0.126	136.1	122.0	142.0	176.7	132.2	171.1
E039	chr1	155965302	155965323	TRUE	OK	269.2	0.00864	0.1916	0.7544	0.221	0.110	247.5	205.4	291.1	306.8	236.0	328.7
E040	chr1	155965323	155965412	TRUE	OK	336.1	0.00984	0.2254	0.7671	0.200	0.100	315.5	245.0	375.7	372.3	317.3	390.6
E041	chr1	155965630	155965760	TRUE	OK	418.5	0.0146	0.1912	0.7541	0.244	0.122	400.3	274.2	474.4	490.4	415.2	456.3
E042	chr1	155966415	155966479	TRUE	OK	416.0	0.0176	0.1696	0.7442	0.283	0.141	411.2	261.7	453.3	506.3	447.5	415.7
E043	chr1	155966819	155966887	TRUE	OK	454.2	0.0248	0.155	0.7367	0.340	0.170	468.4	259.6	477.4	574.8	490.6	454.4
E044	chr1	155968219	155968808	TRUE	OK	23.9	0.0475	0.5275	0.8648	-0.270	-0.135	19.7	33.4	25.2	11.9	24.5	29.0
E045	chr1	155968808	155969155	TRUE	OK	13.6	0.0285	0.09846	0.6967	0.735	0.368	10.8	9.4	10.1	21.8	20.6	8.7
E046	chr1	155969155	155969247	TRUE	OK	478.6	0.0277	0.0916	0.6906	0.432	0.216	486.1	256.5	486.5	630.4	520.0	492.1
E047	chr1	155969247	155969300	TRUE	OK	465.0	0.0296	0.102	0.6995	0.425	0.212	472.3	241.9	482.5	604.6	492.6	496.0
E048	chr1	155969533	155969729	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.0314	0.3483	NA	NA	NA	8.9	5.2	3.0	6.9	9.8	7.7
E049	chr1	155969968	155971063	TRUE	OK	59.1	0.0165	0.7124	0.9237	-0.095	-0.047	61.1	60.5	60.4	50.6	72.5	49.3
E050	chr1	155978066	155978160	TRUE	OK	26.7	0.00796	6.646e-06	0.003913	1.278	0.639	20.7	10.4	15.1	41.7	34.3	37.7
E051	chr1	155978160	155978169	FALSE	LOW_COUNTS_INDEP_FILTER	7.2	0.0813	0.1496	NA	NA	NA	9.9	2.1	3.0	9.9	11.8	6.8
E052	chr1	155978364	155978427	TRUE	OK	276.7	0.0208	0.0297	0.551	0.507	0.253	248.5	148.1	290.1	370.3	298.7	304.6
E053	chr1	155978427	155978501	TRUE	OK	197.5	0.0168	0.1322	0.7245	0.322	0.161	179.5	118.9	226.6	261.1	197.8	201.1
E054	chr1	155978501	155978547	TRUE	OK	135.7	0.0223	0.1366	0.7275	0.373	0.186	124.2	74.0	155.1	188.6	124.4	147.9
E055	chr1	155978912	155979099	TRUE	OK	34.4	0.00735	0.2116	0.7621	0.304	0.152	36.5	22.9	32.2	39.7	38.2	36.7
E056	chr1	155979099	155979113	TRUE	OK	12.3	0.0141	0.4507	0.8396	-0.296	-0.148	16.8	12.5	11.1	11.9	11.8	9.7
E057	chr1	155983106	155983200	FALSE	LOW_COUNTS_INDEP_FILTER	5.1	0.0505	0.759	NA	NA	NA	4.9	4.2	5.0	3.0	3.9	9.7
E058	chr1	155984393	155984433	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0786	0.5473	NA	NA	NA	3.0	0.0	3.0	2.0	2.0	4.8
E059	chr1	155985331	155985374	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.0699	0.2349	NA	NA	NA	1.0	0.0	3.0	3.0	2.0	3.9
E060	chr1	155985374	155985449	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0593	0.2779	NA	NA	NA	2.0	0.0	3.0	4.0	2.0	3.9
E061	chr1	155989233	155989351	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.0663	0.0865	NA	NA	NA	2.0	0.0	2.0	2.0	4.9	4.8
E062	chr1	155989351	155989499	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.178	0.02306	NA	NA	NA	0.0	0.0	0.0	4.0	1.0	1.0
E063	chr1	155989990	155990073	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.335	0.1456	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	1.9
E064	chr1	155990840	155991212	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.22	0.7134	NA	NA	NA	0.0	0.0	2.0	2.0	1.0	0.0
E065	chr1	155996094	155996627	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.141	0.271	NA	NA	NA	2.0	0.0	4.0	3.0	2.0	7.7
E066	chr1	156002440	156002564	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.0996	0.1435	NA	NA	NA	1.0	1.0	0.0	1.0	2.9	2.9
E067	chr1	156003642	156003729	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.395	0.9863	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	1.0
E068	chr1	156006930	156007070	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.384	0.2505	NA	NA	NA	1.0	0.0	1.0	0.0	0.0	0.0
J069	chr1	155947080	155996094	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.206	0.1098	NA	NA	NA	1.0	0.0	2.0	0.0	0.0	0.0
J070	chr1	155948015	155950268	TRUE	OK	107.1	0.00407	0.9129	0.9795	0.010	0.005	101.6	97.0	119.9	102.3	107.7	114.1
J071	chr1	155948015	155950298	TRUE	OK	218.0	0.00156	0.2824	0.7856	0.113	0.057	197.2	224.2	204.5	257.1	200.8	224.3
J072	chr1	155950482	155950828	TRUE	OK	267.6	0.00622	0.06142	0.65	-0.264	-0.132	276.1	311.8	281.0	317.7	192.9	226.2
J073	chr1	155950872	155950873	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J074	chr1	155951272	155951482	TRUE	OK	315.4	0.000998	0.5391	0.8686	0.053	0.027	305.7	302.4	316.3	362.4	283.0	322.9
J075	chr1	155951533	155951740	TRUE	OK	356.3	0.000824	0.9604	0.9908	-0.005	-0.003	343.1	341.0	380.7	394.1	326.1	352.9
J076	chr1	155951776	155951918	TRUE	OK	389.8	0.000958	0.4785	0.849	0.056	0.028	376.7	366.0	398.9	435.8	357.4	404.1
J077	chr1	155951986	155952115	TRUE	OK	373.4	0.00159	0.9705	0.993	-0.002	-0.001	372.7	338.9	402.9	430.9	316.3	379.0
J078	chr1	155952235	155952627	TRUE	OK	375.2	0.0012	0.2219	0.7655	-0.103	-0.052	373.7	395.2	388.8	404.1	317.3	372.2
J079	chr1	155952828	155954901	TRUE	OK	412.8	0.00213	0.9341	0.9844	-0.006	-0.003	408.2	422.3	403.9	452.7	358.4	431.2
J080	chr1	155952828	155957712	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.0619	0.7685	NA	NA	NA	0.0	3.1	4.0	2.0	1.0	2.9
J081	chr1	155954969	155957712	TRUE	OK	418.7	0.00156	0.8925	0.9742	-0.009	-0.005	425.0	407.7	420.0	477.5	357.4	424.4
J082	chr1	155957882	155958319	TRUE	OK	358.6	0.00537	0.5455	0.8704	0.077	0.039	369.8	284.7	387.8	418.0	326.1	365.5
J083	chr1	155958396	155961660	TRUE	OK	336.6	0.00174	0.7288	0.9291	-0.030	-0.015	348.1	322.2	343.5	389.2	282.0	334.5
J084	chr1	155961909	155962104	TRUE	OK	290.4	0.00528	0.02765	0.5406	0.300	0.150	259.3	226.3	294.1	317.7	301.6	343.2
J085	chr1	155962222	155962592	TRUE	OK	297.4	0.00106	0.01002	0.3924	0.228	0.114	272.1	254.4	293.1	368.3	291.8	304.6
J086	chr1	155962718	155962932	TRUE	OK	268.1	0.00316	0.0408	0.5965	0.248	0.124	254.4	214.8	263.9	348.5	239.9	287.2
J087	chr1	155963183	155964987	TRUE	OK	301.1	0.00455	0.01264	0.4222	0.325	0.162	289.9	223.1	288.1	368.3	302.6	334.5
J088	chr1	155965128	155965302	TRUE	OK	96.4	0.0103	0.375	0.8149	0.176	0.088	93.7	67.8	108.8	106.2	85.2	117.0
J089	chr1	155965131	155965302	TRUE	OK	142.1	0.00227	0.0606	0.6489	0.241	0.120	134.1	118.9	136.0	170.8	127.3	165.3
J090	chr1	155965412	155965630	TRUE	OK	207.4	0.0193	0.2088	0.761	0.285	0.143	194.2	129.3	235.7	237.3	187.0	261.0
J091	chr1	155965412	155966415	FALSE	LOW_COUNTS_INDEP_FILTER	7.6	0.0589	0.4461	NA	NA	NA	8.9	7.3	3.0	6.0	12.7	7.7
J092	chr1	155965760	155966415	TRUE	OK	288.7	0.0131	0.2606	0.7793	0.199	0.100	266.2	196.0	341.4	338.5	297.7	292.0
J093	chr1	155966479	155966819	TRUE	OK	297.1	0.0193	0.102	0.6995	0.363	0.181	290.9	176.2	312.2	372.3	328.1	302.6
J094	chr1	155966887	155969155	TRUE	OK	331.6	0.0306	0.17	0.7442	0.363	0.181	354.0	178.3	338.4	431.9	358.4	328.7
J095	chr1	155969300	155969533	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.263	0.9757	NA	NA	NA	0.0	1.0	0.0	0.0	0.0	1.0
J096	chr1	155969300	155969968	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.0207	0.3236	NA	NA	NA	5.9	5.2	5.0	3.0	2.9	4.8
J097	chr1	155969300	155978066	TRUE	OK	25.3	0.00658	2.689e-05	0.01178	1.174	0.587	20.7	10.4	15.1	35.7	32.3	37.7
J098	chr1	155969300	155978364	TRUE	OK	222.0	0.0206	0.04612	0.6143	0.462	0.231	198.2	121.0	240.7	282.0	240.9	249.4
J099	chr1	155969300	155978912	TRUE	OK	21.9	0.0242	0.2387	0.7717	0.403	0.201	23.7	9.4	23.2	25.8	27.4	22.2
J100	chr1	155969300	155983106	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.0539	0.3512	NA	NA	NA	3.9	4.2	1.0	3.0	3.9	7.7
J101	chr1	155983200	155984393	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.173	0.8999	NA	NA	NA	3.0	0.0	3.0	1.0	1.0	4.8
J102	chr1	155984433	155985331	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.177	0.3062	NA	NA	NA	0.0	0.0	3.0	2.0	1.0	3.9
J103	chr1	155985449	155989233	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0507	0.3148	NA	NA	NA	2.0	0.0	2.0	2.0	2.0	3.9
J104	chr1	155989351	155989990	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J105	chr1	155989351	155990840	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J106	chr1	155989351	156003642	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J107	chr1	155996627	156002440	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.555	0.582	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J108	chr1	156003729	156006930	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000116584.18
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE