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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr2 | 37201611 | 37201783 | TRUE | OK | 754.3 | 0.00255 | 0.009337 | 0.3832 | 0.244 | 0.122 | 743.5 | 973.9 | 789.7 | 697.9 | 612.0 | 708.7 |
E002 | chr2 | 37201783 | 37201903 | TRUE | OK | 981.5 | 0.0106 | 0.9547 | 0.9894 | -0.036 | -0.018 | 952.5 | 1523.4 | 1036.4 | 848.8 | 707.0 | 820.8 |
E003 | chr2 | 37202783 | 37202865 | TRUE | OK | 1073.9 | 0.0128 | 0.4802 | 0.8494 | -0.166 | -0.083 | 1060.0 | 1746.6 | 1156.3 | 889.5 | 734.5 | 856.6 |
E004 | chr2 | 37202949 | 37203008 | TRUE | OK | 1070.8 | 0.0085 | 0.4149 | 0.8287 | -0.147 | -0.074 | 1101.4 | 1659.0 | 1173.4 | 911.4 | 733.5 | 846.0 |
E005 | chr2 | 37210998 | 37211082 | TRUE | OK | 959.3 | 0.0111 | 0.2507 | 0.7755 | -0.229 | -0.114 | 995.9 | 1544.3 | 1053.6 | 738.6 | 623.8 | 799.6 |
E006 | chr2 | 37211842 | 37212039 | TRUE | OK | 1451.7 | 0.0117 | 0.4398 | 0.8361 | -0.169 | -0.084 | 1488.9 | 2307.5 | 1552.1 | 1135.8 | 1025.3 | 1200.8 |
E007 | chr2 | 37212039 | 37212108 | TRUE | OK | 39.1 | 0.0128 | 0.2491 | 0.7752 | -0.328 | -0.164 | 53.2 | 63.6 | 34.2 | 25.8 | 27.4 | 30.0 |
E008 | chr2 | 37212334 | 37212392 | TRUE | OK | 817.5 | 0.00947 | 0.2335 | 0.7703 | -0.226 | -0.113 | 884.4 | 1320.1 | 859.2 | 630.4 | 563.1 | 647.8 |
E009 | chr2 | 37213863 | 37213961 | TRUE | OK | 884.9 | 0.00497 | 0.06261 | 0.6515 | -0.243 | -0.122 | 1043.2 | 1327.4 | 957.9 | 661.2 | 614.0 | 705.8 |
E010 | chr2 | 37214885 | 37214952 | TRUE | OK | 589.7 | 0.00184 | 0.01659 | 0.4642 | -0.211 | -0.105 | 725.7 | 812.3 | 667.8 | 466.6 | 396.6 | 468.9 |
E011 | chr2 | 37216139 | 37216208 | TRUE | OK | 685.7 | 0.00183 | 0.08308 | 0.6811 | -0.145 | -0.073 | 834.2 | 868.6 | 819.9 | 554.0 | 470.1 | 567.5 |
E012 | chr2 | 37216315 | 37216418 | TRUE | OK | 782.1 | 0.00213 | 0.2263 | 0.7675 | -0.103 | -0.051 | 939.7 | 968.7 | 937.7 | 664.2 | 537.6 | 644.9 |
E013 | chr2 | 37216983 | 37217037 | TRUE | OK | 675.4 | 0.00113 | 0.06323 | 0.6527 | -0.135 | -0.067 | 786.8 | 874.8 | 816.9 | 572.8 | 471.0 | 529.8 |
E014 | chr2 | 37220384 | 37220473 | TRUE | OK | 833.8 | 0.00197 | 0.1729 | 0.7454 | -0.113 | -0.056 | 990.0 | 1025.0 | 1026.4 | 713.8 | 589.5 | 658.4 |
E015 | chr2 | 37222379 | 37222563 | TRUE | OK | 896.5 | 0.00344 | 0.6281 | 0.8971 | -0.048 | -0.024 | 1026.4 | 1057.3 | 1134.1 | 787.3 | 674.7 | 699.0 |
E016 | chr2 | 37223169 | 37223401 | TRUE | OK | 778.9 | 0.00502 | 0.7229 | 0.927 | -0.038 | -0.019 | 931.8 | 891.5 | 965.9 | 712.8 | 579.7 | 591.7 |
E017 | chr2 | 37227543 | 37228607 | TRUE | OK | 2006.0 | 0.0117 | 0.7365 | 0.9316 | 0.065 | 0.033 | 2551.8 | 2092.7 | 2372.0 | 1807.9 | 1599.2 | 1612.7 |
E018 | chr2 | 37228607 | 37229036 | TRUE | OK | 1471.7 | 0.00528 | 0.1568 | 0.7376 | 0.180 | 0.090 | 1722.6 | 1584.9 | 1694.1 | 1319.4 | 1243.7 | 1265.6 |
E019 | chr2 | 37231272 | 37231369 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.146 | 0.8702 | NA | NA | NA | 5.9 | 2.1 | 2.0 | 0.0 | 3.9 | 3.9 |
E020 | chr2 | 37231411 | 37231596 | TRUE | OK | 584.7 | 0.00403 | 0.03616 | 0.5794 | 0.247 | 0.124 | 629.1 | 637.1 | 671.8 | 501.4 | 516.1 | 553.0 |
J021 | chr2 | 37201903 | 37202783 | TRUE | OK | 511.7 | 0.0203 | 0.1709 | 0.7444 | -0.383 | -0.191 | 500.9 | 942.6 | 551.0 | 396.1 | 301.6 | 378.0 |
J022 | chr2 | 37202865 | 37202949 | TRUE | OK | 646.3 | 0.0165 | 0.1547 | 0.7366 | -0.348 | -0.174 | 663.6 | 1138.6 | 693.0 | 505.3 | 384.9 | 492.1 |
J023 | chr2 | 37203008 | 37210998 | TRUE | OK | 596.6 | 0.00427 | 0.2267 | 0.7676 | -0.152 | -0.076 | 636.0 | 884.2 | 679.9 | 490.4 | 401.5 | 487.3 |
J024 | chr2 | 37211082 | 37211842 | TRUE | OK | 726.4 | 0.0122 | 0.4109 | 0.8273 | -0.183 | -0.092 | 723.7 | 1182.4 | 790.7 | 564.9 | 485.7 | 611.0 |
J025 | chr2 | 37212039 | 37212334 | TRUE | OK | 726.1 | 0.00952 | 0.3647 | 0.812 | -0.179 | -0.089 | 771.1 | 1162.6 | 759.4 | 555.0 | 517.1 | 591.7 |
J026 | chr2 | 37212392 | 37213863 | TRUE | OK | 595.9 | 0.00932 | 0.1912 | 0.7541 | -0.243 | -0.122 | 656.7 | 965.6 | 624.5 | 444.8 | 402.5 | 481.5 |
J027 | chr2 | 37213961 | 37214885 | TRUE | OK | 451.3 | 0.00255 | 0.00539 | 0.305 | -0.288 | -0.144 | 574.8 | 644.4 | 502.6 | 334.6 | 298.7 | 352.9 |
J028 | chr2 | 37214952 | 37216139 | TRUE | OK | 454.6 | 0.0018 | 0.04336 | 0.6052 | -0.181 | -0.091 | 566.0 | 580.8 | 542.9 | 355.4 | 304.6 | 378.0 |
J029 | chr2 | 37216208 | 37216315 | TRUE | OK | 503.1 | 0.00192 | 0.5077 | 0.8584 | -0.056 | -0.028 | 601.5 | 605.8 | 603.3 | 426.9 | 353.5 | 427.3 |
J030 | chr2 | 37216418 | 37216983 | TRUE | OK | 501.5 | 0.00124 | 0.3188 | 0.7972 | -0.077 | -0.038 | 590.6 | 626.7 | 597.3 | 428.9 | 345.7 | 419.6 |
J031 | chr2 | 37217037 | 37220384 | TRUE | OK | 584.1 | 0.000889 | 0.02321 | 0.5144 | -0.160 | -0.080 | 685.3 | 767.4 | 705.1 | 499.4 | 396.6 | 450.5 |
J032 | chr2 | 37220473 | 37222379 | TRUE | OK | 545.4 | 0.00282 | 0.5083 | 0.8587 | -0.066 | -0.033 | 618.2 | 648.6 | 701.0 | 469.6 | 411.3 | 423.5 |
J033 | chr2 | 37222563 | 37223169 | TRUE | OK | 392.6 | 0.00266 | 0.6637 | 0.9087 | -0.042 | -0.021 | 452.6 | 460.9 | 494.5 | 351.4 | 285.9 | 310.4 |
J034 | chr2 | 37223401 | 37227543 | TRUE | OK | 340.2 | 0.00675 | 0.8039 | 0.9509 | 0.043 | 0.022 | 419.1 | 363.9 | 408.9 | 325.6 | 264.4 | 259.1 |
J035 | chr2 | 37229036 | 37231272 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.174 | 0.787 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 |
J036 | chr2 | 37229036 | 37231411 | TRUE | OK | 525.7 | 0.00445 | 0.04124 | 0.5982 | 0.253 | 0.126 | 566.0 | 559.9 | 612.4 | 451.7 | 467.1 | 497.0 |
N037 | chr2 | 37201092 | 37201641 | TRUE | OK | 445.2 | 0.00628 | 8.583e-05 | 0.02794 | 0.570 | 0.285 | 462.4 | 426.5 | 444.2 | 411.0 | 429.9 | 497.0 |
N038 | chr2 | 37201726 | 37201862 | TRUE | OK | 312.0 | 0.00123 | 6.31e-11 | 1.829e-07 | 0.587 | 0.294 | 304.7 | 317.0 | 304.2 | 313.7 | 300.6 | 331.6 |
N039 | chr2 | 37201726 | 37204303 | TRUE | OK | 137.0 | 0.00276 | 0.2543 | 0.7771 | 0.157 | 0.078 | 149.9 | 164.7 | 150.1 | 113.2 | 103.8 | 140.2 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000115816.15 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |