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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr3 | 187721376 | 187721380 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.865 | 1 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
E002 | chr3 | 187721380 | 187721386 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.106 | 0.8852 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 3.0 | 2.0 | 2.9 |
E003 | chr3 | 187721386 | 187722397 | TRUE | OK | 503.9 | 0.00552 | 0.0434 | 0.6052 | -0.282 | -0.141 | 286.9 | 269.0 | 277.0 | 638.4 | 808.9 | 743.5 |
E004 | chr3 | 187722397 | 187722431 | TRUE | OK | 124.5 | 0.00302 | 0.8361 | 0.9595 | 0.033 | 0.017 | 67.0 | 46.9 | 68.5 | 144.9 | 213.5 | 205.9 |
E005 | chr3 | 187722431 | 187722601 | TRUE | OK | 208.5 | 0.00469 | 0.929 | 0.9833 | -0.005 | -0.003 | 117.3 | 80.3 | 113.8 | 226.4 | 371.1 | 342.3 |
E006 | chr3 | 187724568 | 187724940 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.9 | 0.0189 | 0.2863 | NA | NA | NA | 4.9 | 3.1 | 9.1 | 7.9 | 14.7 | 13.5 |
E007 | chr3 | 187724940 | 187725078 | TRUE | OK | 214.3 | 0.00644 | 0.9464 | 0.9873 | 0.004 | 0.002 | 124.2 | 97.0 | 97.7 | 232.3 | 366.3 | 368.4 |
E008 | chr3 | 187725498 | 187725623 | TRUE | OK | 222.2 | 0.00636 | 0.7971 | 0.949 | 0.055 | 0.027 | 127.2 | 102.2 | 93.7 | 250.2 | 385.8 | 374.2 |
E009 | chr3 | 187725623 | 187725629 | TRUE | OK | 123.1 | 0.00502 | 0.2246 | 0.7667 | 0.221 | 0.110 | 68.0 | 50.1 | 46.3 | 142.0 | 219.4 | 212.7 |
E010 | chr3 | 187726730 | 187726898 | TRUE | OK | 180.8 | 0.0117 | 0.1235 | 0.719 | 0.327 | 0.164 | 97.6 | 76.1 | 56.4 | 221.4 | 322.2 | 311.3 |
E011 | chr3 | 187728359 | 187728544 | TRUE | OK | 184.5 | 0.0022 | 0.04463 | 0.6091 | 0.266 | 0.133 | 88.7 | 61.5 | 91.7 | 244.2 | 329.0 | 292.0 |
E012 | chr3 | 187729049 | 187730021 | TRUE | OK | 648.6 | 0.00671 | 0.1678 | 0.7432 | 0.185 | 0.092 | 345.1 | 221.1 | 341.4 | 880.6 | 1097.8 | 1005.5 |
E013 | chr3 | 187731708 | 187731726 | TRUE | OK | 131.8 | 0.0146 | 0.8512 | 0.9636 | 0.010 | 0.005 | 78.9 | 43.8 | 72.5 | 205.5 | 186.1 | 204.0 |
E014 | chr3 | 187731726 | 187731764 | TRUE | OK | 133.8 | 0.0077 | 0.9426 | 0.9865 | -0.034 | -0.017 | 80.9 | 51.1 | 70.5 | 194.6 | 194.9 | 210.8 |
E015 | chr3 | 187731764 | 187731779 | TRUE | OK | 109.3 | 0.0093 | 0.9695 | 0.9927 | -0.031 | -0.015 | 66.1 | 39.6 | 59.4 | 160.8 | 155.7 | 174.0 |
E016 | chr3 | 187731779 | 187731868 | TRUE | OK | 160.8 | 0.0137 | 0.1935 | 0.7555 | 0.249 | 0.125 | 89.7 | 40.7 | 81.6 | 237.3 | 255.6 | 260.1 |
E017 | chr3 | 187731868 | 187731930 | TRUE | OK | 137.9 | 0.00439 | 0.1992 | 0.7573 | 0.198 | 0.099 | 75.9 | 43.8 | 66.5 | 192.6 | 220.3 | 228.2 |
E018 | chr3 | 187733532 | 187733703 | TRUE | OK | 226.4 | 0.00404 | 0.774 | 0.9425 | 0.026 | 0.013 | 145.9 | 79.2 | 107.8 | 285.9 | 383.9 | 355.8 |
E019 | chr3 | 187734444 | 187734868 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.15 | 0.1639 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 5.0 | 6.9 | 1.0 |
E020 | chr3 | 187734868 | 187734882 | TRUE | OK | 147.1 | 0.00392 | 0.4035 | 0.8251 | -0.145 | -0.073 | 101.6 | 53.2 | 79.6 | 188.6 | 243.8 | 215.6 |
E021 | chr3 | 187734882 | 187734907 | TRUE | OK | 136.1 | 0.00297 | 0.1401 | 0.7301 | -0.227 | -0.114 | 94.7 | 55.3 | 75.5 | 164.8 | 230.1 | 196.3 |
E022 | chr3 | 187734907 | 187734947 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.215 | 0.9794 | NA | NA | NA | 6.9 | 0.0 | 1.0 | 7.9 | 9.8 | 2.9 |
E023 | chr3 | 187736089 | 187736186 | TRUE | OK | 19.3 | 0.0193 | 0.7953 | 0.9486 | 0.112 | 0.056 | 9.9 | 4.2 | 13.1 | 16.9 | 37.2 | 34.8 |
E024 | chr3 | 187736186 | 187736569 | TRUE | OK | 27.4 | 0.0398 | 0.1921 | 0.7545 | 0.557 | 0.278 | 7.9 | 4.2 | 18.1 | 28.8 | 58.8 | 46.4 |
E025 | chr3 | 187736569 | 187737088 | TRUE | OK | 29.8 | 0.014 | 0.3127 | 0.7951 | 0.333 | 0.167 | 11.8 | 6.3 | 19.1 | 31.8 | 54.8 | 55.1 |
E026 | chr3 | 187737088 | 187737274 | TRUE | OK | 18.2 | 0.0498 | 0.5233 | 0.8632 | 0.297 | 0.149 | 6.9 | 2.1 | 14.1 | 16.9 | 38.2 | 30.9 |
E027 | chr3 | 187737596 | 187737944 | TRUE | OK | 42.8 | 0.0136 | 0.0001629 | 0.04336 | -1.003 | -0.502 | 30.6 | 37.5 | 33.2 | 35.7 | 54.8 | 64.8 |
E028 | chr3 | 187745409 | 187745437 | TRUE | OK | 90.4 | 0.0158 | 0.6848 | 0.9151 | 0.060 | 0.030 | 67.0 | 29.2 | 34.2 | 120.1 | 158.6 | 133.4 |
E029 | chr3 | 187745437 | 187745459 | TRUE | OK | 37.4 | 0.0454 | 0.3247 | 0.7994 | 0.318 | 0.159 | 28.6 | 6.3 | 12.1 | 58.6 | 69.5 | 49.3 |
E030 | chr3 | 187745459 | 187745468 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0996 | 0.8804 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 3.0 | 1.0 | 2.9 |
E031 | chr3 | 187745468 | 187745472 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.258 | 0.7521 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 |
E032 | chr3 | 187745472 | 187745725 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.189 | 0.3173 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | 0.0 |
J033 | chr3 | 187722601 | 187724940 | TRUE | OK | 111.0 | 0.00712 | 0.2906 | 0.7888 | 0.221 | 0.110 | 56.2 | 38.6 | 53.4 | 119.1 | 192.9 | 205.9 |
J034 | chr3 | 187725078 | 187725498 | TRUE | OK | 142.5 | 0.00689 | 0.5103 | 0.8594 | -0.104 | -0.052 | 84.8 | 75.1 | 63.5 | 152.9 | 242.9 | 235.9 |
J035 | chr3 | 187725629 | 187726730 | TRUE | OK | 106.3 | 0.016 | 0.0905 | 0.6892 | 0.446 | 0.223 | 53.2 | 44.8 | 28.2 | 122.1 | 198.8 | 190.5 |
J036 | chr3 | 187725629 | 187728359 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.305 | 0.2889 | NA | NA | NA | 3.0 | 0.0 | 13.1 | 2.0 | 4.9 | 8.7 |
J037 | chr3 | 187726898 | 187728359 | TRUE | OK | 90.7 | 0.00273 | 0.08685 | 0.6855 | 0.299 | 0.149 | 43.4 | 39.6 | 33.2 | 128.1 | 155.7 | 144.1 |
J038 | chr3 | 187728544 | 187729049 | TRUE | OK | 93.2 | 0.00216 | 0.0219 | 0.5059 | 0.387 | 0.194 | 45.4 | 25.0 | 43.3 | 124.1 | 167.5 | 153.7 |
J039 | chr3 | 187730021 | 187731708 | TRUE | OK | 120.9 | 0.0115 | 0.6652 | 0.909 | 0.068 | 0.034 | 71.0 | 40.7 | 62.4 | 186.6 | 174.3 | 190.5 |
J040 | chr3 | 187731868 | 187733532 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.266 | 0.4424 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 |
J041 | chr3 | 187731930 | 187733532 | TRUE | OK | 114.8 | 0.00282 | 0.06695 | 0.6578 | 0.288 | 0.144 | 63.1 | 33.4 | 51.4 | 155.9 | 190.0 | 195.3 |
J042 | chr3 | 187733703 | 187734868 | TRUE | OK | 143.1 | 0.00244 | 0.3009 | 0.7917 | -0.157 | -0.079 | 99.6 | 53.2 | 76.5 | 178.7 | 238.9 | 211.7 |
J043 | chr3 | 187734907 | 187736089 | TRUE | OK | 12.4 | 0.0119 | 0.5588 | 0.8743 | 0.266 | 0.133 | 5.9 | 3.1 | 7.1 | 10.9 | 23.5 | 24.2 |
J044 | chr3 | 187734907 | 187737596 | TRUE | OK | 17.5 | 0.0278 | 8.494e-08 | 0.0001062 | -2.140 | -1.070 | 15.8 | 22.9 | 23.2 | 17.9 | 13.7 | 11.6 |
J045 | chr3 | 187734907 | 187745409 | TRUE | OK | 88.1 | 0.0169 | 0.5252 | 0.864 | 0.119 | 0.060 | 64.1 | 25.0 | 34.2 | 117.1 | 156.7 | 131.5 |
J046 | chr3 | 187737274 | 187745409 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000113916.18 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |