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Raw Counts Table (ENSG00000113851.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Raw Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr3	3144627	3145452	TRUE	OK	286.1	0.00421	0.002427	0.2118	-0.398	-0.199	344.0	289.0	295.0	263.0	272.0	260.0
E002	chr3	3145452	3145499	FALSE	LOW_COUNTS_INDEP_FILTER	6.6	0.0533	0.6141	NA	NA	NA	6.0	8.0	3.0	3.0	9.0	11.0
E003	chr3	3145499	3145501	FALSE	LOW_COUNTS_INDEP_FILTER	4.8	0.0478	0.3839	NA	NA	NA	3.0	5.0	3.0	3.0	5.0	10.0
E004	chr3	3145600	3145614	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0587	0.02041	NA	NA	NA	10.0	6.0	12.0	3.0	1.0	7.0
E005	chr3	3148991	3150010	TRUE	OK	100.9	0.00806	0.6044	0.8894	-0.103	-0.052	90.0	89.0	123.0	99.0	108.0	99.0
E006	chr3	3150010	3150859	TRUE	OK	436.8	0.00371	0.3106	0.7945	0.119	0.059	401.0	452.0	368.0	439.0	498.0	476.0
E007	chr3	3150859	3150882	TRUE	OK	108.4	0.00327	0.09205	0.6909	0.256	0.128	100.0	93.0	94.0	112.0	120.0	136.0
E008	chr3	3150882	3150987	TRUE	OK	210.9	0.00224	0.05694	0.6417	0.223	0.111	187.0	200.0	180.0	217.0	237.0	252.0
E009	chr3	3150987	3151045	TRUE	OK	184.0	0.00313	0.2249	0.7668	0.158	0.079	165.0	186.0	154.0	195.0	190.0	220.0
E010	chr3	3152455	3152587	TRUE	OK	243.7	0.00425	0.6864	0.9156	0.055	0.028	249.0	236.0	208.0	272.0	237.0	268.0
E011	chr3	3153423	3153488	TRUE	OK	148.2	0.0138	0.6999	0.9199	0.085	0.042	161.0	145.0	111.0	182.0	132.0	163.0
E012	chr3	3153488	3153959	TRUE	OK	17.4	0.0183	0.157	0.7377	0.531	0.266	13.0	13.0	15.0	24.0	27.0	13.0
E013	chr3	3153959	3154075	TRUE	OK	148.5	0.0122	0.4736	0.8473	0.161	0.080	146.0	140.0	121.0	191.0	128.0	170.0
E014	chr3	3154075	3154192	TRUE	OK	13.6	0.0136	0.9574	0.9901	0.024	0.012	12.0	15.0	12.0	14.0	19.0	10.0
E015	chr3	3154192	3154549	TRUE	OK	20.5	0.0136	0.1291	0.7228	0.503	0.251	21.0	14.0	14.0	22.0	21.0	32.0
E016	chr3	3154549	3154746	TRUE	OK	17.6	0.0133	0.9007	0.9763	0.046	0.023	19.0	18.0	13.0	14.0	17.0	25.0
E017	chr3	3154746	3154831	TRUE	OK	132.8	0.00665	0.9038	0.977	-0.018	-0.009	128.0	139.0	119.0	154.0	114.0	146.0
E018	chr3	3154831	3154970	TRUE	OK	14.2	0.137	0.9248	0.9823	0.085	0.043	15.0	8.0	17.0	3.0	22.0	21.0
E019	chr3	3154970	3156089	TRUE	OK	35.4	0.0316	0.7137	0.924	0.155	0.077	29.0	27.0	41.0	23.0	44.0	50.0
E020	chr3	3156089	3156218	FALSE	LOW_COUNTS_INDEP_FILTER	7.1	0.173	0.6331	NA	NA	NA	11.0	0.0	8.0	6.0	8.0	10.0
E021	chr3	3156218	3156281	TRUE	OK	138.0	0.00754	0.853	0.964	0.039	0.019	137.0	135.0	122.0	163.0	119.0	156.0
E022	chr3	3156281	3156784	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.284	0.5712	NA	NA	NA	4.0	0.0	5.0	4.0	2.0	0.0
E023	chr3	3167429	3167633	FALSE	LOW_COUNTS_INDEP_FILTER	6.3	0.0228	0.725	NA	NA	NA	5.0	7.0	5.0	8.0	5.0	8.0
E024	chr3	3167633	3167793	TRUE	OK	230.1	0.00458	0.1333	0.7252	0.212	0.106	201.0	217.0	203.0	274.0	223.0	270.0
E025	chr3	3172175	3172646	TRUE	OK	157.0	0.00738	0.1787	0.7483	-0.244	-0.122	144.0	199.0	146.0	142.0	152.0	161.0
E026	chr3	3172716	3172775	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.0466	0.5464	NA	NA	NA	7.0	10.0	7.0	2.0	8.0	11.0
E027	chr3	3172775	3172923	TRUE	OK	358.2	0.00274	0.825	0.9565	0.022	0.011	313.0	375.0	340.0	388.0	363.0	379.0
E028	chr3	3172923	3172925	TRUE	OK	182.8	0.00295	0.7796	0.9443	0.035	0.018	159.0	192.0	171.0	206.0	191.0	182.0
E029	chr3	3173886	3174058	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.153	0.2422	NA	NA	NA	1.0	0.0	0.0	1.0	2.0	1.0
E030	chr3	3174058	3174121	TRUE	OK	228.1	0.00248	0.9046	0.9773	-0.014	-0.007	200.0	232.0	230.0	242.0	245.0	225.0
E031	chr3	3174121	3174261	TRUE	OK	315.7	0.00646	0.324	0.7991	0.148	0.074	261.0	278.0	334.0	324.0	367.0	341.0
E032	chr3	3175162	3175250	TRUE	OK	237.2	0.00444	0.01842	0.4789	0.326	0.163	195.0	191.0	231.0	253.0	289.0	274.0
E033	chr3	3175250	3175266	TRUE	OK	147.9	0.002	0.0001359	0.03823	0.482	0.241	120.0	125.0	116.0	176.0	180.0	177.0
E034	chr3	3175266	3175269	TRUE	OK	122.3	0.00237	0.001936	0.1869	0.426	0.213	98.0	109.0	97.0	138.0	152.0	145.0
E035	chr3	3179620	3179674	TRUE	OK	125.8	0.0024	0.0005277	0.09163	0.475	0.237	100.0	109.0	98.0	141.0	159.0	153.0
E036	chr3	3179674	3179691	TRUE	OK	66.2	0.00386	0.05705	0.6418	0.346	0.173	61.0	54.0	54.0	71.0	85.0	75.0
E037	chr3	3179691	3179701	TRUE	OK	21.2	0.00814	0.1971	0.7564	0.388	0.194	20.0	16.0	17.0	22.0	25.0	28.0
E038	chr3	3179701	3179704	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.394	0.2861	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
E039	chr3	3179704	3179710	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.394	0.2861	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
E040	chr3	3179710	3179727	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J041	chr3	3145499	3150882	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.5966	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J042	chr3	3145501	3145600	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J043	chr3	3151045	3152455	TRUE	OK	108.6	0.00706	0.1394	0.7293	0.264	0.132	95.0	114.0	77.0	133.0	110.0	126.0
J044	chr3	3151045	3153423	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0691	0.7071	NA	NA	NA	1.0	4.0	1.0	3.0	1.0	1.0
J045	chr3	3152587	3153423	TRUE	OK	99.3	0.0231	0.6201	0.8945	0.142	0.071	114.0	89.0	71.0	116.0	81.0	129.0
J046	chr3	3153488	3153959	TRUE	OK	95.1	0.0124	0.4557	0.8413	0.175	0.088	98.0	85.0	76.0	124.0	82.0	109.0
J047	chr3	3154075	3154746	TRUE	OK	85.5	0.0053	0.8472	0.9624	0.036	0.018	80.0	90.0	74.0	105.0	77.0	89.0
J048	chr3	3154831	3156218	TRUE	OK	85.5	0.0118	0.3175	0.7966	-0.211	-0.105	88.0	90.0	87.0	93.0	60.0	97.0
J049	chr3	3156281	3167633	TRUE	OK	104.0	0.013	0.962	0.9911	0.017	0.008	105.0	110.0	84.0	122.0	83.0	123.0
J050	chr3	3167793	3172775	TRUE	OK	137.9	0.00348	0.1909	0.7541	0.189	0.094	115.0	125.0	134.0	162.0	135.0	161.0
J051	chr3	3172646	3172775	TRUE	OK	70.7	0.00487	0.0386	0.5886	-0.385	-0.192	68.0	93.0	70.0	59.0	62.0	73.0
J052	chr3	3172925	3174058	TRUE	OK	180.1	0.0019	0.7458	0.9342	0.038	0.019	159.0	188.0	167.0	202.0	188.0	181.0
J053	chr3	3174261	3175162	TRUE	OK	195.4	0.00878	0.08308	0.6811	0.310	0.155	159.0	149.0	202.0	199.0	240.0	232.0
J054	chr3	3174261	3179620	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0534	0.8794	NA	NA	NA	3.0	1.0	1.0	1.0	3.0	2.0
J055	chr3	3175266	3179620	FALSE	LOW_COUNTS_INDEP_FILTER	5.3	0.0183	0.2753	NA	NA	NA	4.0	3.0	5.0	5.0	7.0	8.0
J056	chr3	3175269	3179620	TRUE	OK	118.2	0.0017	0.0005221	0.09103	0.459	0.229	93.0	105.0	92.0	135.0	148.0	141.0
N057	chr3	3144710	3146429	TRUE	OK	172.9	0.00726	0.02564	0.529	-0.380	-0.190	218.0	173.0	171.0	175.0	155.0	149.0
N058	chr3	3146623	3147449	TRUE	OK	174.1	0.00826	4.547e-05	0.01761	-0.727	-0.363	218.0	222.0	180.0	168.0	127.0	130.0
N059	chr3	3147703	3147905	TRUE	OK	177.8	0.00356	0.0001418	0.03942	-0.516	-0.258	207.0	180.0	213.0	162.0	148.0	160.0
N060	chr3	3148187	3149093	TRUE	OK	10.2	0.104	0.1062	0.7039	-1.265	-0.632	8.0	7.0	27.0	7.0	7.0	5.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000113851.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE