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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 43287469 | 43289394 | TRUE | OK | 26.3 | 0.0122 | 0.8736 | 0.9693 | -0.048 | -0.024 | 30.6 | 39.6 | 43.3 | 16.9 | 16.6 | 10.6 |
E002 | chr5 | 43289394 | 43291220 | TRUE | OK | 7229.9 | 0.0158 | 0.09055 | 0.6892 | -0.338 | -0.169 | 10596.6 | 11311.4 | 10098.4 | 3973.1 | 3710.5 | 3689.4 |
E003 | chr5 | 43292473 | 43292637 | TRUE | OK | 2333.1 | 0.00127 | 0.6015 | 0.8885 | 0.034 | 0.017 | 3554.6 | 3087.5 | 3284.6 | 1354.2 | 1393.5 | 1324.6 |
E004 | chr5 | 43292847 | 43292973 | TRUE | OK | 1795.7 | 0.00458 | 0.327 | 0.8 | 0.101 | 0.051 | 2963.0 | 2032.3 | 2551.3 | 1134.8 | 1040.0 | 1052.9 |
E005 | chr5 | 43293733 | 43294055 | TRUE | OK | 46.4 | 0.0179 | 0.06454 | 0.6544 | 0.525 | 0.262 | 43.4 | 65.7 | 67.5 | 30.8 | 33.3 | 37.7 |
E006 | chr5 | 43294055 | 43294162 | TRUE | OK | 1938.7 | 0.00608 | 0.171 | 0.7444 | 0.165 | 0.082 | 3114.8 | 2091.7 | 2849.4 | 1201.3 | 1186.9 | 1188.2 |
E007 | chr5 | 43294412 | 43294690 | TRUE | OK | 36.5 | 0.00531 | 2.405e-07 | 0.0002536 | 1.193 | 0.596 | 38.5 | 35.5 | 40.3 | 31.8 | 36.2 | 36.7 |
E008 | chr5 | 43294690 | 43294852 | TRUE | OK | 1967.1 | 0.0055 | 0.1952 | 0.756 | 0.149 | 0.074 | 3100.0 | 2138.6 | 2959.2 | 1246.0 | 1172.2 | 1186.3 |
E009 | chr5 | 43294852 | 43294861 | TRUE | OK | 1126.9 | 0.00599 | 0.4341 | 0.8342 | 0.089 | 0.045 | 1793.5 | 1221.0 | 1727.4 | 705.9 | 634.6 | 678.7 |
E010 | chr5 | 43295751 | 43295857 | TRUE | OK | 1463.5 | 0.00543 | 0.4166 | 0.8292 | 0.087 | 0.044 | 2391.1 | 1611.0 | 2161.5 | 901.5 | 841.2 | 875.0 |
E011 | chr5 | 43295857 | 43295917 | TRUE | OK | 1320.8 | 0.0083 | 0.136 | 0.7272 | 0.211 | 0.105 | 2150.5 | 1349.3 | 1930.8 | 896.5 | 781.5 | 816.0 |
E012 | chr5 | 43297001 | 43297166 | TRUE | OK | 1814.3 | 0.00635 | 0.1672 | 0.7427 | 0.172 | 0.086 | 2922.5 | 1940.5 | 2663.1 | 1211.2 | 1081.1 | 1067.4 |
E013 | chr5 | 43298008 | 43298134 | TRUE | OK | 1902.7 | 0.00966 | 0.352 | 0.808 | 0.137 | 0.068 | 3131.6 | 1986.4 | 2828.3 | 1297.6 | 1047.8 | 1124.4 |
E014 | chr5 | 43298143 | 43298445 | TRUE | OK | 104.1 | 0.0288 | 5.962e-05 | 0.02155 | 1.212 | 0.606 | 117.3 | 68.8 | 138.0 | 73.5 | 113.6 | 113.1 |
E015 | chr5 | 43298445 | 43298517 | TRUE | OK | 100.4 | 0.0297 | 0.004791 | 0.2901 | 0.820 | 0.410 | 132.1 | 64.6 | 156.1 | 75.5 | 94.0 | 80.2 |
E016 | chr5 | 43298517 | 43298678 | TRUE | OK | 2193.3 | 0.0124 | 0.2045 | 0.7595 | 0.209 | 0.105 | 3575.3 | 2149.0 | 3320.8 | 1504.1 | 1287.8 | 1322.6 |
E017 | chr5 | 43298678 | 43298975 | TRUE | OK | 2445.7 | 0.0146 | 0.2391 | 0.7717 | 0.203 | 0.102 | 4052.5 | 2329.4 | 3723.7 | 1621.2 | 1487.5 | 1459.9 |
E018 | chr5 | 43307765 | 43307824 | TRUE | OK | 354.8 | 0.0197 | 0.3163 | 0.7963 | 0.194 | 0.097 | 622.2 | 303.4 | 533.8 | 243.2 | 200.8 | 225.3 |
E019 | chr5 | 43313021 | 43313224 | TRUE | OK | 13.7 | 0.0213 | 0.8577 | 0.9652 | 0.078 | 0.039 | 13.8 | 20.9 | 23.2 | 9.9 | 4.9 | 9.7 |
E020 | chr5 | 43313355 | 43313412 | TRUE | OK | 579.6 | 0.0175 | 0.2572 | 0.778 | 0.214 | 0.107 | 965.3 | 514.1 | 896.4 | 380.2 | 331.0 | 390.6 |
E021 | chr5 | 43313412 | 43313473 | TRUE | OK | 96.1 | 0.0183 | 6.837e-05 | 0.02381 | 0.989 | 0.495 | 111.4 | 69.9 | 140.0 | 75.5 | 88.1 | 91.8 |
E022 | chr5 | 43313473 | 43313474 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.2 | 0.0333 | 9.012e-05 | NA | NA | NA | 9.9 | 1.0 | 8.1 | 8.9 | 11.8 | 9.7 |
E023 | chr5 | 43313474 | 43313512 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.0631 | 0.0008384 | NA | NA | NA | 7.9 | 1.0 | 7.1 | 5.0 | 11.8 | 9.7 |
J024 | chr5 | 43291220 | 43292473 | TRUE | OK | 1308.7 | 0.00228 | 0.6734 | 0.9114 | -0.034 | -0.017 | 1900.0 | 1871.7 | 1863.4 | 754.5 | 756.0 | 706.8 |
J025 | chr5 | 43292637 | 43292847 | TRUE | OK | 1221.2 | 0.00348 | 0.06491 | 0.6548 | 0.183 | 0.092 | 1984.8 | 1416.0 | 1645.8 | 759.5 | 757.0 | 763.8 |
J026 | chr5 | 43292973 | 43294055 | TRUE | OK | 1139.7 | 0.00727 | 0.6274 | 0.8969 | 0.051 | 0.026 | 1940.5 | 1230.4 | 1659.9 | 705.9 | 623.8 | 677.8 |
J027 | chr5 | 43294162 | 43294690 | TRUE | OK | 1155.5 | 0.00474 | 0.05216 | 0.6307 | 0.220 | 0.110 | 1803.4 | 1241.9 | 1694.1 | 731.7 | 739.4 | 722.2 |
J028 | chr5 | 43294861 | 43295751 | TRUE | OK | 971.2 | 0.00629 | 0.5765 | 0.8803 | 0.060 | 0.030 | 1563.8 | 1047.9 | 1496.7 | 605.6 | 533.7 | 579.1 |
J029 | chr5 | 43295917 | 43297001 | TRUE | OK | 966.3 | 0.00671 | 0.08163 | 0.6794 | 0.228 | 0.114 | 1576.6 | 997.9 | 1379.9 | 648.3 | 597.4 | 597.5 |
J030 | chr5 | 43297166 | 43298008 | TRUE | OK | 968.0 | 0.00727 | 0.5731 | 0.8792 | 0.070 | 0.035 | 1617.1 | 1051.1 | 1419.2 | 656.2 | 530.8 | 533.7 |
J031 | chr5 | 43298134 | 43298517 | TRUE | OK | 1145.7 | 0.0112 | 0.5573 | 0.8739 | 0.096 | 0.048 | 1865.5 | 1215.8 | 1733.4 | 794.2 | 570.9 | 694.2 |
J032 | chr5 | 43298975 | 43307765 | TRUE | OK | 341.2 | 0.0207 | 0.4106 | 0.8273 | 0.154 | 0.077 | 608.4 | 294.0 | 512.7 | 232.3 | 188.0 | 211.7 |
J033 | chr5 | 43298975 | 43313021 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0226 | 0.8513 | NA | NA | NA | 5.9 | 5.2 | 9.1 | 4.0 | 1.0 | 3.9 |
J034 | chr5 | 43298975 | 43313355 | TRUE | OK | 330.3 | 0.0142 | 0.3665 | 0.8125 | 0.165 | 0.083 | 536.4 | 315.9 | 514.7 | 217.4 | 173.3 | 224.3 |
J035 | chr5 | 43307824 | 43313355 | TRUE | OK | 235.2 | 0.027 | 0.2319 | 0.7698 | 0.275 | 0.137 | 405.2 | 181.4 | 363.6 | 147.9 | 148.9 | 164.4 |
N036 | chr5 | 43297166 | 43297528 | TRUE | OK | 33.8 | 0.0254 | 0.004707 | 0.2877 | 0.933 | 0.466 | 50.3 | 24.0 | 40.3 | 20.8 | 30.4 | 36.7 |
N037 | chr5 | 43297673 | 43298008 | TRUE | OK | 13.0 | 0.0409 | 0.5339 | 0.8667 | 0.272 | 0.136 | 16.8 | 9.4 | 26.2 | 10.9 | 4.9 | 9.7 |
N038 | chr5 | 43307844 | 43313355 | TRUE | OK | 12.3 | 0.0461 | 0.9763 | 0.9942 | 0.033 | 0.017 | 23.7 | 12.5 | 16.1 | 11.9 | 7.8 | 1.9 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000112972.15 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |