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Normalized Counts Table (ENSG00000112576.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr6	41934932	41934933	FALSE	LOW_COUNTS_INDEP_FILTER	8.8	0.0316	0.4534	NA	NA	NA	9.9	10.4	13.1	3.0	5.9	10.6
E002	chr6	41934933	41934955	TRUE	OK	33.2	0.0121	0.7473	0.9345	0.077	0.038	24.7	48.0	38.3	28.8	27.4	31.9
E003	chr6	41934955	41934984	TRUE	OK	109.2	0.023	0.3777	0.816	-0.289	-0.145	90.7	189.8	123.9	91.3	68.5	90.9
E004	chr6	41934984	41935434	TRUE	OK	2076.3	0.0169	0.2327	0.7701	-0.290	-0.145	2138.7	3273.1	2131.3	1782.1	1481.7	1651.4
E005	chr6	41935434	41935895	TRUE	OK	2822.9	0.0019	0.8922	0.9741	0.009	0.004	3023.1	3501.5	3099.2	2609.1	2259.2	2445.1
E006	chr6	41935895	41936107	TRUE	OK	1996.1	0.00433	0.1855	0.7511	0.152	0.076	2249.1	2117.8	2215.9	1869.4	1704.9	1819.6
E007	chr6	41936195	41936483	TRUE	OK	51.9	0.00556	0.8645	0.967	-0.036	-0.018	53.2	64.6	61.4	38.7	51.9	41.6
E008	chr6	41936483	41936558	TRUE	OK	36.2	0.00555	0.1211	0.7168	-0.366	-0.183	41.4	48.0	47.3	27.8	30.4	22.2
E009	chr6	41936558	41936648	TRUE	OK	1650.6	0.00356	0.1407	0.7302	0.155	0.077	1869.5	1764.3	1794.9	1538.8	1436.6	1499.6
E010	chr6	41936648	41936651	TRUE	OK	942.6	0.00287	0.05961	0.6473	0.186	0.093	1044.2	981.2	1034.4	909.4	843.2	843.1
E011	chr6	41936651	41936672	TRUE	OK	1140.6	0.00449	0.0591	0.646	0.222	0.111	1262.1	1150.1	1259.0	1090.1	1027.3	1054.8
E012	chr6	41936672	41936695	TRUE	OK	1172.9	0.00423	0.07954	0.6763	0.201	0.100	1311.4	1201.2	1286.2	1107.0	1052.7	1079.0
E013	chr6	41936783	41936854	TRUE	OK	15.8	0.0121	0.9531	0.9892	0.019	0.009	16.8	20.9	16.1	9.9	17.6	13.5
E014	chr6	41936854	41937005	TRUE	OK	23.2	0.0288	0.856	0.9647	0.069	0.034	27.6	17.7	32.2	18.9	27.4	15.5
E015	chr6	41937005	41937174	TRUE	OK	28.0	0.0332	0.7107	0.9232	0.135	0.068	32.5	20.9	38.3	17.9	31.3	27.1
E016	chr6	41937174	41937234	TRUE	OK	20.7	0.0452	0.9148	0.98	-0.039	-0.020	23.7	16.7	31.2	10.9	16.6	25.1
E017	chr6	41937234	41937394	TRUE	OK	1909.1	0.00637	0.1835	0.7504	0.183	0.091	2225.4	1930.1	2091.0	1844.6	1681.4	1682.3
E018	chr6	41937712	41937784	TRUE	OK	17.5	0.00965	0.5981	0.8874	-0.173	-0.087	20.7	24.0	18.1	14.9	10.8	16.4
E019	chr6	41938165	41938266	FALSE	LOW_COUNTS_INDEP_FILTER	8.7	0.112	0.5021	NA	NA	NA	12.8	4.2	8.1	5.0	16.6	5.8
E020	chr6	41940369	41940409	TRUE	OK	1152.6	0.00617	0.5573	0.8739	0.081	0.041	1379.4	1173.1	1301.3	1111.9	986.1	963.9
E021	chr6	41940409	41940493	TRUE	OK	1281.5	0.00917	0.9309	0.9837	-0.014	-0.007	1621.0	1293.0	1477.6	1211.2	1046.9	1039.3
E022	chr6	41940493	41940585	TRUE	OK	1292.1	0.00681	0.9092	0.9785	-0.013	-0.007	1584.5	1346.2	1495.7	1237.0	1053.7	1035.5
E023	chr6	41940585	41940726	TRUE	OK	22.1	0.0312	0.1599	0.7389	-0.560	-0.280	38.5	19.8	29.2	17.9	17.6	9.7
E024	chr6	41940951	41941161	TRUE	OK	21.4	0.00836	0.9547	0.9894	0.019	0.009	23.7	21.9	27.2	19.9	15.7	20.3
E025	chr6	41941161	41941451	TRUE	OK	18.6	0.0158	0.9231	0.982	0.047	0.023	24.7	18.8	19.1	23.8	10.8	14.5
E026	chr6	41941451	41941519	TRUE	OK	973.3	0.00656	0.07736	0.6744	-0.238	-0.119	1221.7	1116.8	1190.5	912.4	737.4	661.3
E027	chr6	41941519	41941755	TRUE	OK	967.1	0.0128	0.07792	0.6749	-0.313	-0.156	1194.1	1153.2	1222.8	930.2	742.3	559.8
E028	chr6	41941755	41941766	TRUE	OK	287.3	0.055	0.1343	0.7261	-0.474	-0.237	359.9	351.4	399.9	293.9	226.2	92.8
E029	chr6	41941766	41941848	TRUE	OK	164.4	0.129	0.1732	0.7455	-0.564	-0.282	220.9	201.2	228.6	166.8	142.0	27.1
E030	chr6	42010837	42011067	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.418	0.3502	NA	NA	NA	4.9	0.0	1.0	5.0	5.9	0.0
E031	chr6	42030008	42030190	FALSE	LOW_COUNTS_INDEP_FILTER	6.2	0.023	4.83e-06	NA	NA	NA	1.0	2.1	3.0	11.9	8.8	10.6
E032	chr6	42047998	42048500	FALSE	LOW_COUNTS_INDEP_FILTER	9.1	0.0202	0.002662	NA	NA	NA	3.0	5.2	10.1	11.9	11.8	12.6
E033	chr6	42048500	42048534	TRUE	OK	193.8	0.00865	2.745e-19	3.389e-15	1.623	0.811	139.0	103.2	112.8	300.8	231.1	275.5
E034	chr6	42048534	42048676	TRUE	OK	194.7	0.00439	5.709e-33	2.185e-28	1.717	0.858	128.2	104.3	108.8	296.8	247.8	282.3
E035	chr6	42048676	42048686	TRUE	OK	38.2	0.00884	1.677e-11	5.886e-08	1.725	0.863	27.6	20.9	17.1	59.6	44.1	59.9
E036	chr6	42048686	42048688	TRUE	OK	32.9	0.011	1.586e-11	5.62e-08	1.910	0.955	20.7	15.6	15.1	47.7	40.2	58.0
E037	chr6	42048688	42048690	TRUE	OK	27.1	0.0152	2.362e-09	4.636e-06	1.911	0.956	17.7	14.6	10.1	36.7	34.3	49.3
E038	chr6	42048690	42048702	TRUE	OK	25.7	0.0121	5.207e-09	9.182e-06	1.801	0.901	17.7	14.6	10.1	34.7	32.3	44.5
E039	chr6	42048702	42048704	TRUE	OK	21.5	0.0146	1.589e-08	2.394e-05	1.930	0.965	11.8	10.4	11.1	28.8	26.4	40.6
E040	chr6	42048704	42048708	TRUE	OK	21.4	0.0137	1.429e-08	2.202e-05	1.915	0.958	11.8	10.4	11.1	30.8	24.5	39.6
E041	chr6	42048708	42048894	TRUE	OK	23.2	0.018	3.054e-06	0.002136	1.597	0.799	17.7	10.4	14.1	29.8	26.4	40.6
E042	chr6	42048894	42048968	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.049	0.6342	NA	NA	NA	7.9	3.1	5.0	5.0	3.9	1.0
E043	chr6	42049650	42050357	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0861	0.03701	NA	NA	NA	2.0	0.0	0.0	3.0	2.9	1.9
J044	chr6	41936107	41936558	TRUE	OK	1151.3	0.00385	0.2685	0.7818	0.122	0.061	1319.3	1240.8	1247.9	1048.4	975.4	1076.1
J045	chr6	41936107	41937234	TRUE	OK	75.5	0.00488	0.7479	0.9347	0.058	0.029	95.6	73.0	84.6	70.5	65.6	63.8
J046	chr6	41936695	41937234	TRUE	OK	1025.1	0.00437	0.05086	0.6272	0.228	0.114	1147.7	1031.2	1112.0	970.9	936.2	952.3
J047	chr6	41937394	41938165	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J048	chr6	41937394	41940369	TRUE	OK	910.2	0.00515	0.8863	0.9727	0.021	0.010	1114.2	957.2	1019.3	878.6	749.1	742.5
J049	chr6	41937394	41941451	TRUE	OK	14.9	0.0602	0.05105	0.6276	-1.006	-0.503	15.8	20.9	28.2	6.0	3.9	14.5
J050	chr6	41937394	42030008	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.4639	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J051	chr6	41937394	42048500	TRUE	OK	68.7	0.00275	1.288e-18	1.408e-14	1.511	0.755	43.4	41.7	46.3	94.3	88.1	98.6
J052	chr6	41937784	41940369	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.259	0.1779	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
J053	chr6	41940585	41940951	FALSE	LOW_COUNTS_INDEP_FILTER	7.0	0.0158	0.6927	NA	NA	NA	8.9	11.5	5.0	5.0	5.9	5.8
J054	chr6	41940585	41941451	TRUE	OK	643.2	0.00477	0.08227	0.6802	-0.212	-0.106	824.3	728.9	769.5	590.7	480.8	465.0
J055	chr6	41940585	42030008	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.259	0.1777	NA	NA	NA	0.0	0.0	0.0	1.0	1.0	0.0
J056	chr6	41940585	42048500	TRUE	OK	72.1	0.0144	2.857e-12	1.201e-08	1.762	0.881	49.3	34.4	38.3	112.2	79.3	118.9
J057	chr6	41940585	42049650	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.4639	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J058	chr6	41941161	42048500	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.224	0.5194	NA	NA	NA	0.0	2.1	0.0	0.0	1.0	1.9
J059	chr6	42011067	42048500	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.614	0.4466	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	0.0
J060	chr6	42030190	42048500	FALSE	LOW_COUNTS_INDEP_FILTER	1.9	0.255	0.0169	NA	NA	NA	1.0	0.0	0.0	1.0	2.0	7.7

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000112576.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE