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Normalized Counts Table (ENSG00000111077.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr12	53046968	53047063	TRUE	OK	12.3	0.0397	0.8577	0.9652	-0.066	-0.033	7.9	13.6	13.1	14.9	6.9	17.4
E002	chr12	53048948	53049188	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0265	0.648	NA	NA	NA	3.9	3.1	9.1	8.9	7.8	5.8
E003	chr12	53049188	53049207	FALSE	LOW_COUNTS_INDEP_FILTER	6.3	0.0801	0.5882	NA	NA	NA	5.9	1.0	8.1	11.9	4.9	5.8
E004	chr12	53049207	53049248	TRUE	OK	21.9	0.0465	0.8293	0.9575	-0.118	-0.059	20.7	11.5	30.2	32.8	14.7	21.3
E005	chr12	53049895	53050031	FALSE	LOW_COUNTS_INDEP_FILTER	5.4	0.049	0.3949	NA	NA	NA	7.9	1.0	3.0	5.0	8.8	6.8
E006	chr12	53050031	53050050	TRUE	OK	12.8	0.106	0.4731	0.8472	0.309	0.154	11.8	1.0	18.1	9.9	15.7	20.3
E007	chr12	53050050	53050185	TRUE	OK	150.6	0.0352	0.05843	0.6447	0.531	0.266	148.9	51.1	134.0	173.7	179.2	216.6
E008	chr12	53050185	53050260	TRUE	OK	188.1	0.0211	0.02526	0.5266	0.525	0.263	176.5	77.2	165.2	223.4	218.4	267.8
E009	chr12	53051854	53051963	TRUE	OK	284.6	0.0189	0.06765	0.659	0.378	0.189	247.5	128.3	300.2	332.6	328.1	371.3
E010	chr12	53051963	53052372	FALSE	LOW_COUNTS_INDEP_FILTER	8.7	0.0205	0.255	NA	NA	NA	7.9	11.5	9.1	6.9	10.8	5.8
E011	chr12	53052454	53052492	TRUE	OK	213.3	0.0198	0.5123	0.86	0.101	0.050	188.3	111.6	262.9	252.2	218.4	246.5
E012	chr12	53053410	53053449	TRUE	OK	217.9	0.0127	0.5652	0.8766	0.075	0.037	191.3	126.2	262.9	249.2	228.2	249.4
E013	chr12	53053449	53053610	TRUE	OK	48.7	0.0109	0.8926	0.9742	0.027	0.013	42.4	30.2	59.4	38.7	55.8	65.7
E014	chr12	53053773	53053812	TRUE	OK	243.5	0.01	0.2449	0.7739	0.176	0.088	209.0	136.6	279.0	270.0	274.2	292.0
E015	chr12	53053964	53054014	TRUE	OK	271.2	0.0105	0.1056	0.7032	0.261	0.131	229.7	144.9	299.1	303.8	314.3	335.5
E016	chr12	53054026	53054269	TRUE	OK	23.5	0.00798	0.9219	0.9818	0.029	0.015	21.7	16.7	25.2	18.9	31.3	27.1
E017	chr12	53054269	53054441	TRUE	OK	306.4	0.0153	0.2325	0.7701	0.209	0.104	279.0	158.5	339.4	361.4	362.3	337.4
E018	chr12	53055185	53055236	TRUE	OK	194.5	0.00652	0.5616	0.8755	0.071	0.035	193.3	117.8	207.5	216.4	219.4	212.7
E019	chr12	53055567	53055690	TRUE	OK	241.6	0.00599	0.5575	0.874	0.070	0.035	243.5	149.1	251.8	251.2	292.8	261.0
E020	chr12	53055690	53055780	TRUE	OK	14.4	0.0297	0.6424	0.9018	0.203	0.102	7.9	16.7	12.1	17.9	19.6	12.6
E021	chr12	53055780	53055806	TRUE	OK	193.4	0.00795	0.9134	0.9796	-0.043	-0.021	214.0	121.0	202.5	202.5	213.5	206.9
E022	chr12	53055806	53055845	TRUE	OK	207.8	0.0157	0.8252	0.9565	0.009	0.004	246.5	122.0	198.4	230.3	225.2	224.3
E023	chr12	53055845	53056377	TRUE	OK	64.3	0.00772	0.05075	0.6272	0.416	0.208	49.3	38.6	61.4	56.6	85.2	94.7
E024	chr12	53057012	53057096	TRUE	OK	252.7	0.0228	0.5788	0.881	0.084	0.042	294.8	130.3	245.8	293.9	266.4	285.2
E025	chr12	53057566	53057679	TRUE	OK	321.5	0.0121	0.1504	0.7349	0.247	0.124	316.5	174.1	313.2	378.3	351.6	395.4
E026	chr12	53057745	53057772	TRUE	OK	24.8	0.0138	0.8126	0.9533	-0.066	-0.033	24.7	16.7	28.2	16.9	36.2	26.1
E027	chr12	53057772	53057833	TRUE	OK	292.0	0.00769	0.06118	0.6498	0.285	0.143	280.0	167.9	270.9	337.5	324.1	371.3
E028	chr12	53057927	53058026	FALSE	LOW_COUNTS_INDEP_FILTER	5.1	0.0719	0.185	NA	NA	NA	3.9	1.0	4.0	2.0	10.8	8.7
E029	chr12	53058026	53058073	TRUE	OK	257.7	0.00877	0.1543	0.7364	0.223	0.112	249.5	146.0	253.8	290.9	279.1	326.8
E030	chr12	53058073	53058102	TRUE	OK	231.7	0.0138	0.2267	0.7676	0.228	0.114	236.6	127.2	218.6	264.1	238.0	305.5
E031	chr12	53058315	53058394	TRUE	OK	291.6	0.0147	0.4331	0.8338	0.127	0.063	305.7	159.5	297.1	334.6	305.5	347.1
E032	chr12	53058394	53058445	TRUE	OK	277.2	0.00908	0.2623	0.7796	0.171	0.086	278.1	160.6	274.0	306.8	297.7	346.1
E033	chr12	53058445	53058545	TRUE	OK	34.5	0.0114	0.5207	0.8625	0.162	0.081	22.7	22.9	43.3	30.8	42.1	45.4
E034	chr12	53058545	53058571	TRUE	OK	25.2	0.0124	0.1284	0.7223	0.456	0.228	15.8	13.6	28.2	22.8	32.3	38.7
E035	chr12	53058571	53058637	TRUE	OK	300.9	0.00398	0.3777	0.816	0.098	0.049	290.9	193.9	310.2	325.6	328.1	356.8
E036	chr12	53058637	53058713	TRUE	OK	35.1	0.0157	0.3985	0.8235	-0.246	-0.123	26.6	30.2	48.3	24.8	45.0	35.8
E037	chr12	53058713	53058742	TRUE	OK	239.2	0.00545	0.3856	0.8188	0.107	0.054	235.7	146.0	247.8	261.1	265.4	279.4
E038	chr12	53058742	53058827	TRUE	OK	279.9	0.00502	0.1767	0.7472	0.173	0.086	279.0	174.1	265.9	307.8	318.3	334.5
E039	chr12	53058827	53058854	TRUE	OK	26.7	0.0104	0.1959	0.7563	-0.354	-0.177	26.6	26.1	30.2	14.9	31.3	30.9
E040	chr12	53059046	53059270	TRUE	OK	339.6	0.00346	0.5996	0.8878	0.055	0.028	347.1	240.9	323.3	362.4	374.1	389.6
E041	chr12	53059270	53059382	TRUE	OK	287.1	0.00423	0.1677	0.7432	-0.184	-0.092	313.6	221.1	303.2	282.9	275.2	326.8
E042	chr12	53059382	53059967	TRUE	OK	711.7	0.00341	0.785	0.9458	-0.042	-0.021	690.2	506.8	778.6	730.7	743.3	820.8
E043	chr12	53059967	53059971	TRUE	OK	171.8	0.01	0.427	0.8321	-0.178	-0.089	175.5	114.7	210.5	189.6	159.6	180.8
E044	chr12	53059971	53060166	TRUE	OK	295.4	0.00588	0.7833	0.9452	0.019	0.010	288.9	187.7	326.3	309.8	311.4	348.1
E045	chr12	53060166	53060258	TRUE	OK	240.0	0.00421	0.8829	0.9718	0.004	0.002	238.6	153.3	263.9	237.3	274.2	272.6
E046	chr12	53060344	53060404	TRUE	OK	39.9	0.031	0.08765	0.6863	0.670	0.335	25.6	25.0	32.2	27.8	74.4	54.1
E047	chr12	53060404	53060549	TRUE	OK	342.2	0.00223	0.6184	0.8939	-0.058	-0.029	345.1	243.0	367.6	328.6	391.7	377.1
E048	chr12	53060549	53060555	TRUE	OK	248.0	0.00273	0.8418	0.9612	0.014	0.007	238.6	165.8	270.9	244.2	290.8	277.5
E049	chr12	53060674	53060759	TRUE	OK	338.5	0.00211	0.3024	0.7921	-0.107	-0.053	329.3	262.8	369.7	324.6	398.6	346.1
E050	chr12	53060759	53060848	TRUE	OK	337.4	0.00226	0.6569	0.9066	-0.048	-0.024	337.2	254.4	347.5	330.6	401.5	352.9
E051	chr12	53060848	53060988	TRUE	OK	396.8	0.00313	0.6828	0.9145	-0.048	-0.024	414.1	307.6	382.7	410.0	439.7	426.4
E052	chr12	53060988	53061264	TRUE	OK	551.4	0.0067	0.4969	0.8546	0.087	0.044	549.2	378.5	537.9	643.3	595.4	604.3
E053	chr12	53061379	53061469	TRUE	OK	365.2	0.00346	0.1751	0.7463	0.147	0.073	345.1	237.7	365.6	408.0	423.0	411.9
E054	chr12	53061673	53061711	TRUE	OK	64.9	0.0228	0.8925	0.9742	0.067	0.033	68.0	40.7	64.5	43.7	96.9	75.4
E055	chr12	53061711	53061814	TRUE	OK	76.4	0.0113	0.4137	0.8283	0.203	0.101	73.0	53.2	67.5	59.6	107.7	97.7
E056	chr12	53061814	53061895	TRUE	OK	388.0	0.00136	0.2285	0.7684	0.106	0.053	363.8	290.9	368.6	398.1	448.5	458.3
E057	chr12	53061895	53061940	TRUE	OK	288.6	0.00252	0.337	0.803	-0.101	-0.050	282.0	241.9	295.1	268.1	297.7	347.1
E058	chr12	53061940	53062152	TRUE	OK	57.7	0.0211	0.809	0.9523	-0.027	-0.013	57.2	54.2	48.3	38.7	66.6	81.2
E059	chr12	53062152	53062245	TRUE	OK	427.2	0.00314	0.5038	0.857	-0.067	-0.034	391.4	363.9	442.2	404.1	441.7	520.2
E060	chr12	53062375	53062379	TRUE	OK	287.9	0.00255	0.2919	0.7893	-0.113	-0.056	266.2	245.0	309.2	269.0	293.8	344.2
E061	chr12	53062379	53062453	TRUE	OK	375.4	0.00203	0.2405	0.7725	-0.111	-0.055	348.1	328.5	391.8	355.4	395.6	433.1
E062	chr12	53062619	53062691	TRUE	OK	348.8	0.00272	0.2066	0.7603	-0.133	-0.066	314.5	319.1	366.6	336.6	369.2	386.7
E063	chr12	53062691	53062697	TRUE	OK	263.0	0.0022	0.2407	0.7726	-0.122	-0.061	239.6	233.6	279.0	239.3	290.8	295.9
E064	chr12	53062697	53062899	TRUE	OK	79.9	0.0244	0.2179	0.7641	0.377	0.189	44.4	74.0	70.5	70.5	102.8	117.0
E065	chr12	53062899	53063088	TRUE	OK	73.5	0.0189	0.06589	0.6559	0.545	0.273	54.2	52.1	55.4	59.6	95.0	124.7
E066	chr12	53063088	53063236	TRUE	OK	406.7	0.00144	0.3352	0.8025	-0.081	-0.041	381.6	343.1	421.0	380.2	452.4	462.1
E067	chr12	53063236	53063257	TRUE	OK	299.2	0.00168	0.2907	0.7888	-0.100	-0.050	283.0	259.6	306.2	282.9	334.9	328.7
E068	chr12	53063348	53063417	TRUE	OK	421.9	0.00352	0.02936	0.5492	-0.242	-0.121	403.3	403.5	446.2	372.3	458.3	447.6
E069	chr12	53063417	53063511	FALSE	LOW_COUNTS_INDEP_FILTER	8.4	0.0809	0.4072	NA	NA	NA	9.9	3.1	5.0	5.0	18.6	8.7
E070	chr12	53063562	53063592	TRUE	OK	378.6	0.00563	0.007912	0.3588	-0.361	-0.180	378.6	393.1	396.8	329.6	387.8	385.8
E071	chr12	53063743	53064312	TRUE	OK	951.5	0.021	0.175	0.7462	-0.321	-0.160	835.1	1088.6	940.7	840.9	1007.7	995.8
E072	chr12	53064312	53064369	TRUE	OK	32.8	0.0638	0.1625	0.7403	-0.651	-0.326	22.7	53.2	36.3	19.9	22.5	42.5
E073	chr12	53064369	53064371	TRUE	OK	14.6	0.0496	0.003862	0.2627	-1.459	-0.730	13.8	30.2	17.1	8.9	8.8	8.7
E074	chr12	53064371	53064372	TRUE	OK	14.3	0.0418	0.003247	0.2431	-1.409	-0.705	13.8	28.2	17.1	8.9	8.8	8.7
J075	chr12	53047063	53051854	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.149	0.6959	NA	NA	NA	0.0	1.0	4.0	1.0	2.0	4.8
J076	chr12	53049248	53051854	TRUE	OK	20.5	0.0446	0.7547	0.9367	-0.154	-0.077	19.7	11.5	28.2	30.8	13.7	19.3
J077	chr12	53050260	53051854	TRUE	OK	146.8	0.0222	0.00481	0.2908	0.709	0.354	133.1	55.3	112.8	182.7	178.2	218.5
J078	chr12	53051963	53052454	TRUE	OK	170.0	0.0238	0.3786	0.8164	0.174	0.087	139.0	85.5	211.5	207.5	170.4	205.9
J079	chr12	53052492	53053410	TRUE	OK	173.7	0.0197	0.621	0.8949	0.060	0.030	152.8	91.8	220.6	201.5	182.1	193.4
J080	chr12	53053449	53053773	TRUE	OK	178.8	0.0131	0.4352	0.8345	0.117	0.059	145.9	102.2	220.6	200.5	194.9	208.8
J081	chr12	53053812	53053964	TRUE	OK	208.0	0.0135	0.1145	0.7119	0.283	0.142	166.6	106.4	238.7	237.3	246.8	252.3
J082	chr12	53054014	53054269	TRUE	OK	171.7	0.0138	0.118	0.7145	0.296	0.148	150.9	85.5	183.3	213.4	195.9	201.1
J083	chr12	53054441	53055185	TRUE	OK	143.8	0.0129	0.3209	0.7982	0.169	0.085	137.1	73.0	159.1	164.8	164.5	164.4
J084	chr12	53055236	53055567	TRUE	OK	152.9	0.00546	0.9428	0.9865	-0.004	-0.002	153.8	97.0	168.2	158.8	185.1	154.7
J085	chr12	53055690	53055780	TRUE	OK	150.2	0.00784	0.8804	0.9712	-0.050	-0.025	167.6	92.8	158.1	158.8	165.5	158.6
J086	chr12	53055845	53057012	TRUE	OK	145.9	0.0229	0.9233	0.982	-0.025	-0.012	182.4	82.4	138.0	170.8	146.9	154.7
J087	chr12	53057096	53057566	TRUE	OK	205.4	0.0286	0.2706	0.7824	0.245	0.123	231.7	90.7	190.4	238.3	233.1	248.5
J088	chr12	53057679	53057772	TRUE	OK	217.4	0.00847	0.0692	0.6614	0.298	0.149	204.1	123.0	204.5	262.1	233.1	277.5
J089	chr12	53057833	53058026	TRUE	OK	186.0	0.00425	0.01441	0.4429	0.337	0.169	166.6	111.6	169.2	214.4	204.7	249.4
J090	chr12	53058102	53058315	TRUE	OK	201.8	0.0136	0.2481	0.775	0.209	0.104	207.1	105.3	198.4	223.4	218.4	258.1
J091	chr12	53058445	53058571	TRUE	OK	192.2	0.00834	0.7282	0.9289	0.048	0.024	187.3	126.2	203.5	220.4	182.1	234.0
J092	chr12	53058637	53058713	TRUE	OK	189.2	0.0063	0.3162	0.7963	0.140	0.070	183.4	113.7	194.4	220.4	205.6	217.5
J093	chr12	53058827	53059046	TRUE	OK	172.6	0.00943	0.08408	0.6822	0.304	0.152	177.5	102.2	141.0	207.5	203.7	204.0
J094	chr12	53058854	53059046	FALSE	LOW_COUNTS_INDEP_FILTER	8.6	0.0811	0.4439	NA	NA	NA	3.0	11.5	5.0	6.9	9.8	15.5
J095	chr12	53059967	53060404	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0637	0.1296	NA	NA	NA	1.0	0.0	1.0	3.0	3.9	1.0
J096	chr12	53059971	53060166	FALSE	LOW_COUNTS_INDEP_FILTER	6.1	0.0403	0.267	NA	NA	NA	8.9	2.1	10.1	6.9	5.9	2.9
J097	chr12	53060258	53060404	TRUE	OK	135.9	0.00391	0.07016	0.6631	-0.272	-0.136	152.8	102.2	154.1	130.1	123.4	152.8
J098	chr12	53060555	53060674	TRUE	OK	241.3	0.00278	0.7217	0.9266	0.031	0.015	229.7	157.5	265.9	238.3	286.9	269.7
J099	chr12	53060759	53060848	FALSE	LOW_COUNTS_INDEP_FILTER	3.7	0.0295	0.7405	NA	NA	NA	1.0	4.2	4.0	3.0	5.9	3.9
J100	chr12	53061264	53061379	TRUE	OK	221.1	0.00269	0.1396	0.7296	0.168	0.084	216.9	143.9	207.5	246.2	256.6	255.2
J101	chr12	53061469	53061814	TRUE	OK	232.5	0.00246	0.0605	0.6489	0.208	0.104	207.1	154.3	227.6	274.0	265.4	266.8
J102	chr12	53061940	53062152	TRUE	OK	245.7	0.00214	0.2703	0.7823	-0.116	-0.058	231.7	211.7	257.8	230.3	247.8	294.9
J103	chr12	53062245	53062375	TRUE	OK	275.4	0.00268	0.1901	0.7539	-0.144	-0.072	257.3	238.8	297.1	258.1	271.3	329.7
J104	chr12	53062245	53062379	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0398	0.7141	NA	NA	NA	3.0	0.0	3.0	2.0	3.9	2.9
J105	chr12	53062453	53062619	TRUE	OK	245.8	0.00164	0.3796	0.8167	-0.087	-0.044	229.7	217.9	246.8	246.2	257.6	276.5
J106	chr12	53062691	53063088	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.626	0.6848	NA	NA	NA	1.0	3.1	0.0	0.0	0.0	3.9
J107	chr12	53062697	53063088	TRUE	OK	213.2	0.00119	0.1029	0.7008	-0.163	-0.081	206.1	185.6	226.6	197.6	226.2	236.9
J108	chr12	53063257	53063348	TRUE	OK	277.1	0.00133	0.2732	0.783	-0.101	-0.050	262.3	245.0	279.0	265.1	306.5	304.6
J109	chr12	53063417	53063562	TRUE	OK	299.8	0.00152	1.319e-05	0.006885	-0.413	-0.206	306.6	296.1	339.4	262.1	294.8	299.7
J110	chr12	53063592	53063743	TRUE	OK	336.8	0.00747	0.01761	0.4728	-0.365	-0.182	324.4	362.9	354.5	287.9	342.7	348.1
N111	chr12	53046061	53053395	TRUE	OK	12.0	0.0398	0.09627	0.6952	-0.787	-0.394	14.8	18.8	9.1	9.9	6.9	12.6
N112	chr12	53053574	53054320	TRUE	OK	10.6	0.0114	0.2443	0.7737	-0.479	-0.239	12.8	6.3	15.1	8.9	7.8	12.6

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000111077.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE