Raw Counts Table (ENSG00000109381.19)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr4 | 139028111 | 139028349 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.105 | 0.2304 | NA | NA | NA | 2.0 | 0.0 | 2.0 | 1.0 | 7.0 | 5.0 |
E002 | chr4 | 139057219 | 139057716 | TRUE | OK | 30.1 | 0.01 | 0.01369 | 0.4347 | -0.680 | -0.340 | 44.0 | 26.0 | 26.0 | 23.0 | 31.0 | 32.0 |
E003 | chr4 | 139057716 | 139057854 | TRUE | OK | 20.9 | 0.015 | 0.007274 | 0.3459 | -0.889 | -0.445 | 31.0 | 17.0 | 23.0 | 15.0 | 14.0 | 26.0 |
E004 | chr4 | 139057854 | 139058718 | TRUE | OK | 552.9 | 0.0211 | 0.0987 | 0.6968 | -0.409 | -0.204 | 473.0 | 591.0 | 488.0 | 598.0 | 543.0 | 639.0 |
E005 | chr4 | 139058718 | 139059607 | TRUE | OK | 1140.2 | 0.00119 | 0.5679 | 0.8774 | 0.042 | 0.021 | 1025.0 | 812.0 | 978.0 | 1272.0 | 1402.0 | 1410.0 |
E006 | chr4 | 139060323 | 139060478 | TRUE | OK | 349.9 | 0.00682 | 0.9481 | 0.9878 | -0.027 | -0.013 | 355.0 | 211.0 | 316.0 | 385.0 | 404.0 | 448.0 |
E007 | chr4 | 139060478 | 139060595 | TRUE | OK | 322.7 | 0.00801 | 0.7957 | 0.9487 | -0.063 | -0.032 | 339.0 | 196.0 | 289.0 | 385.0 | 375.0 | 369.0 |
E008 | chr4 | 139060595 | 139060600 | TRUE | OK | 218.4 | 0.011 | 0.7312 | 0.9297 | -0.090 | -0.045 | 239.0 | 130.0 | 195.0 | 272.0 | 247.0 | 239.0 |
E009 | chr4 | 139060600 | 139060674 | TRUE | OK | 303.7 | 0.0067 | 0.8589 | 0.9656 | 0.009 | 0.005 | 307.0 | 180.0 | 269.0 | 362.0 | 359.0 | 362.0 |
E010 | chr4 | 139061864 | 139061866 | TRUE | OK | 209.0 | 0.00258 | 0.3558 | 0.8093 | 0.106 | 0.053 | 191.0 | 127.0 | 183.0 | 242.0 | 253.0 | 270.0 |
E011 | chr4 | 139061866 | 139061936 | TRUE | OK | 253.3 | 0.00252 | 0.5212 | 0.8627 | 0.069 | 0.034 | 232.0 | 160.0 | 224.0 | 289.0 | 298.0 | 331.0 |
E012 | chr4 | 139061936 | 139062057 | TRUE | OK | 300.5 | 0.00299 | 0.6338 | 0.8989 | 0.051 | 0.026 | 287.0 | 195.0 | 254.0 | 332.0 | 351.0 | 401.0 |
E013 | chr4 | 139066009 | 139067683 | TRUE | OK | 31.3 | 0.00708 | 0.9918 | 0.9979 | -0.005 | -0.003 | 25.0 | 21.0 | 32.0 | 40.0 | 32.0 | 39.0 |
E014 | chr4 | 139067683 | 139067770 | TRUE | OK | 236.1 | 0.00626 | 0.979 | 0.9949 | -0.011 | -0.006 | 255.0 | 152.0 | 185.0 | 267.0 | 275.0 | 296.0 |
E015 | chr4 | 139071865 | 139072003 | TRUE | OK | 343.6 | 0.00916 | 0.8286 | 0.9573 | -0.061 | -0.030 | 366.0 | 204.0 | 307.0 | 382.0 | 388.0 | 434.0 |
E016 | chr4 | 139072003 | 139072039 | TRUE | OK | 46.6 | 0.00849 | 0.2791 | 0.7847 | -0.252 | -0.126 | 45.0 | 32.0 | 51.0 | 38.0 | 58.0 | 58.0 |
E017 | chr4 | 139072039 | 139072220 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.116 | 0.1556 | NA | NA | NA | 3.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 |
E018 | chr4 | 139073453 | 139073567 | TRUE | OK | 336.7 | 0.00776 | 0.859 | 0.9656 | 0.010 | 0.005 | 339.0 | 200.0 | 299.0 | 411.0 | 377.0 | 413.0 |
E019 | chr4 | 139073567 | 139073719 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.0535 | 0.7081 | NA | NA | NA | 4.0 | 5.0 | 8.0 | 7.0 | 11.0 | 3.0 |
E020 | chr4 | 139084132 | 139084224 | TRUE | OK | 177.0 | 0.0098 | 0.1238 | 0.7193 | -0.296 | -0.148 | 179.0 | 126.0 | 186.0 | 218.0 | 194.0 | 166.0 |
E021 | chr4 | 139084224 | 139084325 | TRUE | OK | 109.8 | 0.0104 | 0.4235 | 0.8309 | -0.156 | -0.078 | 101.0 | 89.0 | 100.0 | 144.0 | 129.0 | 100.0 |
E022 | chr4 | 139084325 | 139084337 | TRUE | OK | 41.5 | 0.0256 | 0.5033 | 0.8568 | -0.192 | -0.096 | 35.0 | 39.0 | 37.0 | 60.0 | 48.0 | 31.0 |
E023 | chr4 | 139084337 | 139084338 | TRUE | OK | 34.4 | 0.025 | 0.5802 | 0.8813 | -0.167 | -0.083 | 26.0 | 33.0 | 32.0 | 47.0 | 43.0 | 26.0 |
E024 | chr4 | 139084338 | 139084414 | TRUE | OK | 36.0 | 0.0247 | 0.3868 | 0.8193 | -0.265 | -0.132 | 30.0 | 36.0 | 33.0 | 48.0 | 44.0 | 26.0 |
E025 | chr4 | 139084414 | 139084496 | TRUE | OK | 19.6 | 0.0575 | 0.4145 | 0.8285 | -0.319 | -0.159 | 17.0 | 20.0 | 18.0 | 34.0 | 18.0 | 11.0 |
E026 | chr4 | 139101590 | 139102353 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.3 | 0.0683 | 0.03309 | NA | NA | NA | 1.0 | 2.0 | 0.0 | 5.0 | 3.0 | 9.0 |
E027 | chr4 | 139116648 | 139116807 | TRUE | OK | 17.9 | 0.0114 | 0.003711 | 0.2575 | 1.025 | 0.512 | 12.0 | 8.0 | 8.0 | 30.0 | 21.0 | 30.0 |
E028 | chr4 | 139117828 | 139117950 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.0438 | 0.3567 | NA | NA | NA | 2.0 | 2.0 | 3.0 | 8.0 | 3.0 | 5.0 |
E029 | chr4 | 139125163 | 139125329 | TRUE | OK | 165.8 | 0.00784 | 4.211e-07 | 0.000407 | 0.905 | 0.452 | 111.0 | 66.0 | 105.0 | 226.0 | 217.0 | 283.0 |
E030 | chr4 | 139136770 | 139137629 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.5 | 0.0832 | 0.7547 | NA | NA | NA | 4.0 | 7.0 | 6.0 | 13.0 | 3.0 | 6.0 |
E031 | chr4 | 139137629 | 139137867 | TRUE | OK | 150.4 | 0.00826 | 1.784e-07 | 0.000199 | 0.958 | 0.479 | 102.0 | 53.0 | 94.0 | 210.0 | 208.0 | 248.0 |
E032 | chr4 | 139139412 | 139139476 | TRUE | OK | 85.6 | 0.00729 | 1.988e-05 | 0.009548 | 0.846 | 0.423 | 65.0 | 35.0 | 48.0 | 105.0 | 124.0 | 144.0 |
E033 | chr4 | 139139476 | 139139497 | TRUE | OK | 69.4 | 0.011 | 0.0001398 | 0.03903 | 0.890 | 0.445 | 53.0 | 30.0 | 34.0 | 79.0 | 112.0 | 114.0 |
E034 | chr4 | 139176966 | 139177199 | TRUE | OK | 69.2 | 0.0115 | 0.0003502 | 0.07103 | 0.850 | 0.425 | 52.0 | 32.0 | 35.0 | 76.0 | 116.0 | 110.0 |
E035 | chr4 | 139177199 | 139177218 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.393 | 0.3808 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
J036 | chr4 | 139028349 | 139060323 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.173 | 0.7997 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
J037 | chr4 | 139059607 | 139060323 | TRUE | OK | 175.3 | 0.00663 | 0.8995 | 0.976 | -0.026 | -0.013 | 177.0 | 109.0 | 156.0 | 177.0 | 200.0 | 243.0 |
J038 | chr4 | 139060674 | 139061864 | TRUE | OK | 195.2 | 0.00171 | 0.4154 | 0.8288 | 0.087 | 0.044 | 178.0 | 120.0 | 173.0 | 228.0 | 237.0 | 246.0 |
J039 | chr4 | 139062057 | 139067683 | TRUE | OK | 149.7 | 0.0066 | 0.7376 | 0.9319 | -0.067 | -0.033 | 165.0 | 106.0 | 112.0 | 177.0 | 159.0 | 187.0 |
J040 | chr4 | 139062057 | 139071865 | TRUE | OK | 23.9 | 0.0155 | 0.8917 | 0.974 | -0.052 | -0.026 | 25.0 | 11.0 | 25.0 | 21.0 | 27.0 | 36.0 |
J041 | chr4 | 139067770 | 139071865 | TRUE | OK | 155.9 | 0.00439 | 0.8832 | 0.9719 | -0.033 | -0.016 | 168.0 | 99.0 | 127.0 | 182.0 | 177.0 | 191.0 |
J042 | chr4 | 139072003 | 139073453 | TRUE | OK | 180.0 | 0.0113 | 0.9365 | 0.9851 | -0.012 | -0.006 | 191.0 | 97.0 | 164.0 | 199.0 | 205.0 | 235.0 |
J043 | chr4 | 139072039 | 139073453 | TRUE | OK | 36.0 | 0.0062 | 0.3444 | 0.8053 | -0.226 | -0.113 | 33.0 | 25.0 | 40.0 | 33.0 | 37.0 | 50.0 |
J044 | chr4 | 139073567 | 139084132 | TRUE | OK | 136.5 | 0.00808 | 0.03201 | 0.5611 | -0.399 | -0.199 | 152.0 | 98.0 | 143.0 | 159.0 | 148.0 | 124.0 |
J045 | chr4 | 139073567 | 139125163 | TRUE | OK | 85.5 | 0.00753 | 0.0001012 | 0.03136 | 0.773 | 0.386 | 67.0 | 36.0 | 50.0 | 117.0 | 107.0 | 143.0 |
J046 | chr4 | 139102353 | 139116648 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.172 | 0.8079 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 1.0 |
J047 | chr4 | 139116807 | 139117828 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0859 | 0.1026 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 4.0 | 1.0 | 2.0 |
J048 | chr4 | 139117950 | 139125163 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.222 | 0.6423 | NA | NA | NA | 2.0 | 0.0 | 3.0 | 0.0 | 1.0 | 4.0 |
J049 | chr4 | 139125329 | 139137629 | TRUE | OK | 86.1 | 0.0113 | 1.607e-06 | 0.001232 | 1.089 | 0.544 | 45.0 | 29.0 | 58.0 | 121.0 | 116.0 | 155.0 |
J050 | chr4 | 139137867 | 139139412 | TRUE | OK | 48.1 | 0.0156 | 0.000578 | 0.09693 | 0.942 | 0.471 | 40.0 | 14.0 | 25.0 | 64.0 | 68.0 | 82.0 |
J051 | chr4 | 139139497 | 139176966 | TRUE | OK | 57.3 | 0.0149 | 0.0003954 | 0.07704 | 0.945 | 0.473 | 43.0 | 22.0 | 29.0 | 62.0 | 98.0 | 95.0 |
N052 | chr4 | 139016171 | 139043073 | TRUE | OK | 53.6 | 0.128 | 0.02166 | 0.5043 | -1.318 | -0.659 | 80.0 | 40.0 | 84.0 | 63.0 | 43.0 | 12.0 |
N053 | chr4 | 139043343 | 139044638 | TRUE | OK | 70.9 | 0.0345 | 0.001436 | 0.1612 | -1.091 | -0.545 | 103.0 | 56.0 | 95.0 | 76.0 | 60.0 | 37.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|